ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771666 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◣ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SOX6
NRG1
SFRP2
REST
DNMT3B
METTL11B
LIN28B
ZNF343
WFDC8
TIMP4
GIMAP5
MED12
FBP1
PRICKLE1
FLAD1
FGD4
HESX1
VENTX
ETV1
GDF3
FGFR2
AK4
TDGF1
SNRPN
FZD2
KLF17
ADAMTS16
PSMD9
HPD
SPIC
SACS
PLEKHA5
CAAP1
PPP1R16B
C22orf39
PCDHGC4
DHX32
PITPNM2
PWWP3A
TCHP
CDC14B
PIPOX
TBC1D16
PDCL
CNGA1
GSN
METTL7A
GEMIN7
VAPB
KRTAP3-1
CER1
RGSL1
ACCS
PPP1R18
ESRP1
PALM2AKAP2
MBOAT2
PRRC2B
CNR2
PCDHB8
KIAA1522
USP44
NADK
RIF1
DNMBP
KCNIP4
DPPA4
GSPT2
ANK2
CCL2
NDST1
CCDC169-SOHLH2
CCDC169
LYPD1
DCLK1
OBI1
UGT1A6
PCDHB13
SYNPO2
BEST3
ETV4
FBXO40
KRT8
HDAC9
MTF2
IFIT3
CCDC92
DUSP12
RIMBP2
PCDHB5
CNPY1
PBDC1
ZNF318
LRRTM4
MACROH2A1
ACSBG2
WDR49
SFT2D3
SGMS2
LIN28A
RIPOR3
ZNF532
GRM4
TRIM54
SLFN12
WBP1L
KLHL4
DACH2
KCNMB2
SMAD3
F11
SERPINB6
TSGA10IP
VOPP1
CFLAR
NLGN1
SOX15
FAM153B
RNF213
ZYG11A
LPCAT4
TMEM220
KMT2B
ZNF202
HES5
EPB41L1
MYOM1
PMEPA1
OVCH1
ST18
ARID5A
MS4A12
GADD45G
GRAMD2B
IER5L
ZNF649
ABCF3
CYRIB
SLC10A2
LRRTM3
LIFR
IL23A
DCLRE1C
TMCC1
WNT5B
CDH10
CCN2
ZSCAN12
SP5
SNX16
ERICH3
ZFYVE1
TACC2
SOX5
SPAG9
KLHL5
CPA5
SASH1
SLC2A11
OLIG3
RND1
SRRM4
MRGPRX3
CCDC167
ADA2
TRPM3
PDPN
ACSL1
TTC39B
RAP1A
CORO6
MPZL2
EIF4B
USP48
RNF19A
PCDH18
AUH
GCNT2
HOXB1
RFX4
GALNT8
RBMX
KLF7
SET
CCDC172
NEBL
IL1RAPL1
RGMB
TNC
APH1A
HLCS
DDX3X
ODF2
CNBP
JAG1
STOX2
PBLD
HNRNPH3
STMN1
RFFL
SLCO4C1
YWHAQ
FAM162B
TINAGL1
GJA1
EFCAB8
DPP4
THEM4
ITPRIP
SLCO5A1
AKIRIN1
KDELR2
ALPK3
SLC35G4
ADGRA1
SYTL2
EGFR
MAN2C1
ARL5C
C1orf167
CPVL
INSYN2B
NSMCE4A
OR2A1
CLEC9A
RASSF8
TMEM114
SUCLA2
LOC107986453
BAMBI
CPN2
C7orf33
KLF5
DERA
CNKSR3
KMT5C
ZNF747
FOXP1
DHRS3
ERMN
OLAH
MGRN1
ZNF469
C16orf78
RNF43
GOT1L1
CDH6
SLC2A14
SHF
C1R
GREB1
PLAGL1
FMN1
IL20
ST6GAL1
NODAL
MB21D2
TUBB
ARSD
CAMTA1
CPNE2
SLC16A8
ZSCAN10
PLD2
RBM47
TMEM184B
ETV6
UTS2
HLTF
USP53
EXOSC4
EIF4E3
PRKAG2
LMAN2L
SLC35G3
ATAD2
DDX31
SCNN1A
LTBR
HMGCL
TRIM22
EIF1AX
RAB34
BCAT1
ADGRL2
DGLUCY
MAP2K5
MDK
CTIF
KIFBP
PBX1
AHCYL1
NFE2
PSKH2
FGFRL1
SPATA12
PLPP2
AHCYL2
ZNF763
PPM1H
FGF1
ACVR1
RGS3
ZNF254
PCDHA11
IFRD1
CLCF1
DAOA
MFSD6
SMARCA2
TGM6
ALDH7A1
RFC5
LDB1
TNRC18
MMP10
PRDM14
CCR7
HMGB1
S100A16
PXMP4
DISP3
PROM1
EID3
ALDH3A2
SEMG1
TAL1
TBC1D9
HAS3
IL17RD
NOTCH1
CTNND2
DPPA2
GALR1
MAGEB4
SHROOM3
MEIG1
TCL1B
NINJ2
ZBTB38
RNF44
LPP
SPPL2B
LSM7
TMEM202
RASAL2
ALPL
LLGL1
CPSF4L
CEP41
RIMKLB
CAD
NHSL2
MYO7A
NDUFS7
RBPJ
RNASEL
ARHGEF10L
RHCE
EIF4G1
CUL4B
SERPINF1
FAM227A
CBY1
PAG1
ZNF101
ARID1B
ZCCHC12
GRHL3
SLC35G5
GJC1
BIK
GKN2
DAGLB
ATOH1
SEPTIN9
LGI1
LRRC10
ZCCHC18
CCT2
DGCR8
AASDH
MEF2C
CABYR
RAD23B
ANKDD1B
BFSP1
PCYT1B
ABCB8
GNA12
LEMD2
PKDCC
MCTS1
ETFBKMT
BMPR2
PCDHB1
DHX8
SERPINB3
EBF1
SEC31B
NANOG
GAB2
WFDC6
H4C9
KCNAB1
SH2B3
VANGL2
PAIP2
SPHK2
MRPS15
RHD
MGAM2
NRCAM
CELSR3
LOC105372977
DST
AMOTL2
CARHSP1
KIFC3
MSH6
ZBED9
PLCH1
SORBS2
NDP
ZBTB45
VEZT
FGD6
MANSC1
BRINP2
PDE4D
CYP21A2
OLFM1
CDH9
SLC17A6
GRIN3A
PLEKHG2
LMO4
CCND1
ADAMTSL1
DACT3
TENM2
CD300LB
TCTEX1D4
BTBD19
C22orf31
ZNF358
RBP1
PIM1
LDHD
GSG1L
FUZ
ADD2
ZFP64
SLC25A24
TRAK1
HSH2D
LPAR2
INKA2
ZSCAN31
MYH2
PHACTR1
TMUB2
TFDP2
DSE
TSPYL4
HELLS
MAP4
PTMA
CD200
ZSWIM4
GRK6
FBXO11
SLC11A2
DAB2IP
C1orf100
TFAP2A
CYB561
ITGB8
UACA
TRDMT1
GRHL2
RGS5
LASP1
EPB41L5
OC90
ZBED6CL
FAM120B
CTTNBP2NL
ANKS1B
H4C4
TBC1D8
TLE3
PSAP
STK17A
ANAPC15
PRPF38A
ORC1
CTBP2
USP39
C2orf68
ACSBG1
TSKU
CDX1
NME4
QPRT
SKA2
PRR11
GSTO1
PUM2
ATPAF1
SRC
ESR1
SCOC
TDRP
FOXH1
SERPINB4
DNMT3A
ZNF3
SGK3
MFSD5
NDUFB5
MRPL47
SMARCB1
PALB2
DCTN5
TBX6
ZNF140
GALNT14
CYLD
TJP2
C1orf127
STAU1
EFHD1
SRPK2
NAALAD2
PDP1
TESK2
C2CD5
CPSF6
LPAR4
SCG3
SCGB1D2
TSTD2
NCBP1
NRK
CCDC146
SEC22C
SS18L2
IL3
ZNF304
OGT
CLCN5
NOL4
GLIPR1L2
MED23
XK
SMARCC2
PARVG
PKIB
PPP2R1B
G3BP2
KLK13
ISL2
SUN2
USP9X
CENPH
BEND5
DCDC2
FBXL19
CEP164
CDHR3
SHISA3
ARMCX5-GPRASP2
ARMCX5
ARID2
PTPN12
NOTCH3
DLG3
DNAI2
NDUFS5
WBP1
FAM3A
HTR2B
TCF7L2
HNRNPUL1
SLC4A2
CDK5
GLRX2
UMOD
CEP63
ANAPC13
S100A2
OLFM2
PTK2
PIK3R3
ETFB
CNP
RNASEH1
NCAPD2
UTRN
C2CD4A
CABLES2
G3BP1
PACSIN2
TOMM40
SPTBN1
PSMA1
MYEF2
CTXN2
FAM107B
HK2
KLHL12
ABCA1
ANP32B
GLUL
PITX2
ZNF611
GRB7
ZNF562
PHLDB2
STRA6
TCF4
IGDCC3
TBCC
BICRAL
AP3M2
KATNAL2
PIAS2
INAVA
WDR72
IL15
SLC7A11
MRO
CACHD1
WDTC1
CRYL1
MARCKS
ZFHX2
DNASE2
SLCO1C1
CAPN13
FRMD4A
LYVE1
CAPRIN1
CFAP20
ZNF37A
RBBP6
SALL2
CAMKV
RUFY1
RHOBTB2
EIF4G2
EGR2
SPATA6L
PLPP6
MRAP2
SLAIN2
LYRM2
PPARGC1A
TOM1L1
RBBP7
GET3
URGCP
URGCP-MRPS24
PLEKHG1
TNFRSF21
MAT2B
NMI
ZNF34
PRR15
JAK1
SPAG4
ATP2B4
LIMS1
HERC3
PYURF
PIGY
RAC1
PIN4
IER3
MX1
CLK4
PSORS1C2
CALD1
PTGFRN
CDKL5
RRAS2
TCF21
HIP1
COG7
ARHGEF37
CCDC171
HSPA6
DOLPP1
APOBEC2
FASTKD2
TTI2
LTA4H
H2AC16
THOC5
PRR7
EIF4A1
SLC18B1
ARHGAP18
RP9
MYNN
FAM169A
SPATC1L
ZNF250
RADIL
CENPF
NICN1
TAGLN2
GPR141
PLEKHA8
HEXIM1
ZNF85
CCDC50
ZNF737
SLC35F2
UNC5D
SPRY4
NUP153
DOT1L
LZTS2
ICAM3
MYOCOS
IL5RA
KIAA0895L
TBX22
CNN3
DYNLL2
ZNF775
KDM3A
RBFOX2
TBK1
CREB5
CBLC
CHD6
IGF1
IFNK
RXRG
H2AZ2
XAB2
ING1
IGFBP3
HNRNPL
NTNG1
MYLK3
BCL9
FASTKD1
RNF122
RAD54B
FSBP
RBM22
UBALD2
P4HB
PTPRB
ARNT
PWWP2A
ZIC1
AGO2
AADACL3
LMO1
GNAI2
ZBTB20
NRARP
DDX17
CELF3
ZSCAN2
PHF5A
ACO2
MTRNR2L8
MTRNR2L2
CYTH2
IQCH
AAGAB
HGS
ARL16
ZFC3H1
THAP2
GPSM3
MCCC1
EEF1A1
ARIH1
WDFY2
TES
KDM2A
PGK1
SINHCAF
SNAPC3
H3-3B
C20orf96
UFD1
CDC45
RTBDN
PDIA4
SIX2
SLC7A5
ZNF195
SRSF7
SLC33A1
KCNN2
OSBPL1A
SLC25A36
MSANTD4
DICER1
FOXO6
CFL1
NUP160
WDR36
ZSCAN9
SLC16A13
VASH2
WDR74
ZNF428
OGA
TRMT2A
RANBP1
UBQLN4
HSPH1
POLB
SYNCRIP
DPP3
LAMTOR2
CD2BP2
LINGO1
HMGN1
CSRNP2
KNTC1
SH3GL3
ESRRA
GADD45A
CP
TIAL1
PIF1
CHN2
EMC9
TUT1
OAZ2
SLC25A11
RNF167
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
KLHL24
SDCCAG8
NEDD9
RAB30
EMSY
F11R
JUP
ZFAND3
SFPQ
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
FAM181A
LIMCH1
ITGB1
ZDHHC5
STK32C
LRRC27
ZBTB40
ERGIC2
YEATS2
EGR3
EP300
TMEFF1
PES1
HEXIM2
SAXO1
RRAGA
ADRM1
ATAT1
E2F7
POLDIP3
ZBTB8OS
RBBP4
HNRNPDL
NSA2
GFM2
CCDC88A
ADAR
TSNAXIP1
RANBP10
ENOPH1
TIA1
SMIM14
MOSPD3
HSPA13
ZBTB6
TCN2
IPO11
HBP1
DTNA
NKIRAS1
ARF4
RPL27
FAT1
GXYLT2
SENP8
MYO9A
PSMB7
AFF1
ACTR1A
JPT1
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
AKAP9
PIMREG
LCOR
EXOC5
AP5M1
PELI1
ADNP
GDF5
CEP250
BBS7
WBP11
C12orf60
MMACHC
CCDC163
UQCRQ
GDF9
IP6K2
CDK5R1
FILIP1L
ABAT
HACL1
BTD
RRBP1
GFRA1
ZNF106
HIP1R
RSF1
AAMDC
VGF
PSME3IP1
ID1
CDK12
DLG2
PKNOX2
POLR3E
SIRT4
TMPRSS7
SPHK1
RSPH14
RSPRY1
DLX5
ERBB2
HEBP2
CCDC130
PRM3
PER2
ASMTL
SYBU
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
ZNF608
NASP
C11orf58
MAP3K9
INSM1
RCOR1
BLOC1S4
PTGS1
PYDC5
IFI16
IREB2
ELOVL5
ZNF506
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
TUT7
DDX5
DNM2
INTS9
HMBOX1
AFAP1
C6orf132
ZBTB18