ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101129 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◣ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SOX6
ZNF343
REST
SPIC
RIF1
MED12
UGT1A6
JPT1
OBI1
NRG1
MTF2
KLF5
NADK
CFLAR
PRICKLE1
PROM1
DUSP12
IER5L
MBOAT2
PALM2AKAP2
ABL2
LDAH
CNR2
FLAD1
GSN
ABCB8
FGD4
LRRTM4
SNRPN
PMEPA1
TDGF1
PDCL
ZNF318
SLC2A11
CCDC169-SOHLH2
CCDC169
SFRP2
FAM227A
CBY1
DERA
RASSF8
ZNF469
SLCO4C1
SLC25A16
PRRC2B
ZNF532
GALNT8
CNGA1
KIFBP
IFRD1
PITPNM2
WARS1
SLC7A7
MRGPRX3
TRIM22
VANGL2
C1R
SLC35G4
TRIML2
FBXO40
FOXP1
PINK1
SRRM4
GIMAP5
ST18
MS4A12
ELP6
KRT8
FASTKD1
RIMKLB
DISP3
NOTCH1
TNFSF8
DNMBP
F11
GLIPR2
CEP85L
FEZ2
SLC35G5
DAGLB
ADA2
AHCYL2
CELF3
SLC2A14
SET
CHMP7
LINGO1
GDF3
HDAC9
AK4
CAAP1
FAM169A
STMN1
SLFN12
MED15
LPCAT4
TACC2
AMOTL2
DEFB108B
CCL2
C22orf39
BEND3
DPPA2
ZSCAN2
TMEM202
AP2A1
FGFR2
SERPINB6
SRPK2
CCDC92
ZNF664-RFLNA
ZNF664
ETV1
CEP41
SLC35G3
HES2
TRIM60
DDX3X
AUH
CLEC9A
SEPHS2
BLOC1S4
GPR1
FBP1
AASDH
ZNF140
EPB41L1
NANOG
ADAMTS16
THEM4
RAPH1
VENTX
GEMIN7
SNX16
RUNX1T1
CD200
NDUFAF3
DALRD3
WDFY2
DCLK1
ARHGAP42
SELENOT
GXYLT2
USP44
DGLUCY
HEXIM1
RUFY1
GXYLT1
CAPRIN1
DLAT
ACSBG2
RBM41
HESX1
LMAN2L
FBXL19
FANK1
TUBB
ZNF37A
ITFG2
CDH10
THRA
CD300LB
SMARCB1
PLAC8
PDHB
ZNF777
CAMKV
SUCLA2
GCNT2
SACS
PLAGL1
VMO1
GADD45G
RAP1A
LIN28A
CALD1
MTA2
UBQLN1
CPSF4L
PCDHA10
TSKU
LHB
FKBP7
IGF1
LACTBL1
ANK3
GAB2
PRSS47
ESRP1
TNFAIP8L1
CCDC167
ALAD
GRK6
PHLDB2
HSPH1
PPP1R8
FIG4
AK9
ZNF114
MPPE1
C17orf98
PTHLH
PRDM1
CYTH2
LEMD2
STK38
PTPN12
TTC23L
ZNF701
LYPD1
CYB561
WDR36
RNASEH1
KIAA0895L
TSTD2
NCBP1
RAD54B
DHRS3
FSBP
KLHL12
TMCC1
TDRP
CEP78
EID3
ZNF48
DLG3
KDM4E
TJP2
ANKDD1B
IGSF9
UACA
PALB2
DCTN5
LPP
MX1
CCNDBP1
PRLHR
PPARGC1B
RNASE9
MRPS15
RCOR1
H2AC15
H2BC15
THOC5
MACROH2A1
TIMM50
FOLR3
KLF7
SIK2
ZFYVE1
ZSCAN20
LCOR
FOXO6
ANP32B
EVI2B
UFD1
CDC45
WNT5B
HOXA9
SH3BP2
NR2C2AP
NOBOX
MBNL3
SYNCRIP
H2AC16
AVEN
COX7B
CDC14B
CDK5R1
AFF1
OLIG3
IER3
MANSC1
TMEM220
FNIP2
LEKR1
PNRC1
BSND
CFL1
KIAA1671
LRRTM3
JUP
USP3
IREB2
CRLF2
MFAP5
ZNF668
WBP1L
ZCCHC14
SLAIN2
PRMT1
KMT2B
NUP160
WASF1
CDC40
INKA2
CBR3
MORF4L1
SHCBP1
DDX20
RNASE4
ANG
CRACDL
MDK
SCNN1A
LTBR
MCL1
TNPO2
TLL2
FRAT1
GYPC
UBQLN4
LAMTOR2
FILIP1L
CTBP2
ST3GAL4
FNBP1L
MCTS1
NUBP1
S100A16
GAPVD1
NUP62
IL4I1
ATF5
CCDC116
USP11
PHAX
ARHGAP18
XRN2
EVI5
DNMT3A
UBE2R2
IFTAP
HHIPL1
CCDC85C
TMBIM1
PTMA
FAM3A
MUC20
GPSM3
FBN3
SHF
RPS24
TCL1B
SPANXA2
SPANXA1
ANK2
ZNF589
BDNF
KCNN2
CCDC146
LTBP1
PPP2R5C
SLC12A6
ADAR
FAM153B
LUC7L2
FMC1-LUC7L2
FMC1
CD53
DPPA4
MEIG1
HMOX2
SASH1
WDR11
RBMX
ZNF630
SMARCE1
ZNF649
USP54
ZNF524
FIZ1
GSTA3
PSMD9
HPD
ZCCHC12
SHROOM3
ZSCAN31
SCGB1D2
SH2D4A
GPR141
NRARP
PUM2
HMGCL
CILK1
FUZ
PIPOX
ZNF627
PCDHGC4
GABPB1
IFIT3
DSE
TSPYL4
SUN2
MSMO1
ZFC3H1
THAP2
CCNG2
PGM2L1
RUNX1
MYOM1
TMEM91
B9D2
MEF2A
SH3D21
C19orf33
SIX2
TSGA10IP
CNBP
LAMB1
NCLN
NSA2
GFM2
RERE
ARHGEF11
TJP3
RFLNA
PAXBP1
KLF17
CCDC171
NCAPD3
ZC4H2
LBX2
KLK13
BRCA1
SMTN
ZBED9
MYO7A
BIN1
YPEL2
SUSD6
SRSF7
BAZ1B
JAG1
ANKRD36B
WDR72
ADNP
SMARCA2
GID4
ATPAF2
SETD7
TBC1D9
NHSL1
CYRIB
FCSK
SYT12
MTRNR2L2
SIRT4
ZNF101
CELSR3
HLCS
ARMCX5-GPRASP2
ARMCX5
PLD2
HSH2D
TAF6
CNPY4
LMNA
LMBRD1
MEX3A
GALR1
ARSD
CERKL
ZBTB45
CCDC130
RMND1
ETV6
EIF4E3
ARL5C
SHMT2
ETV4
TSPAN14
CLIC6
PCDHB1
ESR1
TOMM40
DHX8
MANEAL
KDM3A
TTI2
EFNA4
RBBP6
SYBU
UGT2B17
TIA1
IDO2
SLCO5A1
DDX31
CABYR
ALDH7A1
SLC25A14
ERGIC2
SPTBN1
LTA4H
SPRED3
GGN
DIPK1A
FAM162B
GATAD1
WDR74
EGR3
SPHK2
METTL7A
ABCA1
SPATA7
AHCYL1
EFNA1
ARHGEF16
CCN2
RSPH14
TMEM106A
ZNF195
PPP1R18
YWHAZ
LPIN1
KLHL24
AFAP1
PHACTR1
TIAM1
SLC30A6
SLC18B1
ABLIM1
TRMO
TRAK1
TEAD2
MN1
KLF8
NEDD9
ZNF561
ZBED3
PPP2R2A
SYT2
FAM71E1
EMC10
HK2
IMMT
C7orf33
LYRM1
HTN3
C2CD2
OGT
ANKRD36
BCAT1
RBM47
SRSF3
CLCN3
DHX33
C20orf96
ZFP69B
MAPK8
PRRC1
ARHGEF10L
CLK4
WWOX
UBE2O
AANAT
ZNF879
USP48
LGALS8
ASXL1
ZNF304
ZSCAN9
HIP1R
NAP1L4
TIGD3
SOX15
ZNF14
NMRK2
SLC39A1
LMF2
CDX2
ZSCAN12
ZIK1
NAT16
STOX2
MAP3K9
SFXN1
C1GALT1C1L
GOLGA6L7
BSDC1
ZSCAN18
CD38
HOXB1
NASP
PICALM
FUT4
MUC4
NBPF6
TMEM237
FANCM
ANAPC15
KNL1
PIP4K2C
MRPS36
RIOX1
ATP5PO
RABAC1
MTRNR2L8
TNRC18
MCCC1
NUFIP2
ADGRA1
KBTBD2
MRO
HSPA6
PCBP1
TMEM141
PSMB7
C16orf78
ZCCHC18
SNAI2
KCNAB1
TAGLN2
ZNF34
AMT
FADS2
ZNF775
RNF19A
PCDHB13
AMOT
PCMTD2
DYSF
NCKAP5L
RPUSD4
FAM118B
RNF44
GJA1
RAB5A
EFHB
GLIPR1L2
NDUFS2
ZNF362
MAJIN
STAG3
GPC2
PYDC5
IFI16
WTAP
SOD2
ATF4
KCNJ15
CNP
RTL8B
KLF6
CRYBA2
LRP5
ARID5A
MAD2L1BP
GTPBP2
RPS6KA2
PMVK
SMIM30
ZNF763
MAP7D1
APELA
PCDHB8
PBX1
CMSS1
PIP5K1C
CEACAM7
NEBL
PDE4D
PRRC2A
PRPF38A
ORC1
AAR2
CELF1
TAF13
TAF7
NMI
C3orf84
CCDC50
TP53INP2
FASTKD2
ALOXE3
NKX2-1
ISLR2
CCT2
RNF213
CDH6
USP37
CNOT9
MOSPD3
BCL9
MEGF9
HIP1
UFSP2
LPAR2
MIEN1
GRB10
ARIH1
LLGL1
DNASE1
HHAT
ZNF559-ZNF177
ZNF559
COL4A6
COL4A5
ZNF567
FOLR1
DDX17
ZBTB8OS
RBBP4
SMIM14
VCPKMT
ZNF426
TLR4
PLCH1
SLC7A11
KIF3C
SLC35E2B
FN1
SESN3
G6PC3
POU2F1
TP53I11
MYCN
XRCC5
PDZK1
FAM131C
TMPRSS4
ZKSCAN5
ST6GAL1
RAB4B
FOXA1
SEMA6C
ZNF583
PEX5
TTC6
SLC22A7
LOXL2
NDUFS5
SFPQ
SMC3
IGBP1
PSAP
ZNF135
MEST
HMCN1
DDX39B
NECAP2
PNKD
EPRS1
SLC29A3
IL17RD
ZNF587
RIOK3
GAS7
MRPL58
EIF1AX
NSUN3
DHFR2
DUSP1
ZNF611
KATNBL1
KIAA1109
YLPM1
ADD2
ZFHX2
HNRNPF
IRAK1BP1
GPKOW
TAF7L
MED17
SETMAR
PANX1
BTF3L4
TXNDC12
MARCKS
DPP3
CD2BP2
PPP1R15A
ENOX2
C12orf57
KATNAL2
PIAS2
CCND1
ARHGDIB
FREM2
C1QTNF2
ATAT1
YIPF3
POLR1C
NDE1
PPP1R12C
FOCAD
FZD10
SLC9A9
TRIP11
SNX12
MARF1
TRAF4
ZBED5
GREB1
ATF7IP
MSH6
FOXH1
ZNF33A
ZNF284
NTNG1
MOGAT3
ZFAND3
TMEFF1
VMAC
NDUFA11
HIPK3
PRDX4
ST6GALNAC1
HMGB1
MCM7
AP4M1
ANKRD28
ZNF440
ARHGAP39
GJB7
SINHCAF
SLC25A11
RNF167
GBA
CIAO2A
HECTD4
ZNF24
ABCF2
ING1
PAFAH2
ZBTB14
SYCP1
PIN4
AK7
TMEM63A
IGDCC4
ACVR1
E2F7
ERCC6L2
CDON
TSPAN15
NCOA1
MYBL2
FAM120B
CSRNP2
ZNF254
NELFCD
MYL12A
GLUL
DNAJC12
RNF220
VASP
ST8SIA4
FAM160B1
SMIM10L2A
POLB
VEZT
FGD6
HES6
GABARAP
FOSB
HMGB2
RNF31
PSME2
C10orf120
CCDC28B
VN1R5
TRIM56
MKRN2OS
LOC389199
ZNF84
PTPRK
DDX59
ZNF35
IPMK
ATAD3B
RNF125
IP6K2
USP30
WDR87
SIPA1L3
VPS4B
C2CD5
TFAP2A
KMT2A
PIFO
LDHD
MAP2K6
CRIP1
EGFR
CBX1
PDXDC1
MAP7
LRG1
ERVW-1
ITPRIP
C12orf73
DSG2
CCDC126
CCNB1
FKBP9
OSBPL9
TBL1X
ZSCAN5A
SSR3
ZNF280D
CFAP36
NGEF
GRIN3A
CCDC77
DGCR8
IL23A
GDF5
CEP250
TTC39B
CACNB3
ZAR1L
BRCA2
TRIOBP
PCDHA11
GRWD1
FBLIM1
SPEG
FAM161B
COQ6
SPDYE12P
MYO1G
CRIP3
API5
RBCK1
RTL8C
C11orf95
DEFB121
USHBP1
ATOH1
EPC1
SLC45A4
HINT2
NMNAT2
TLX3
RNF43
PLEKHA5
SLC35F2
TNFSF9
HERC3
PYURF
PIGY
GPBP1L1
SQSTM1
MGAT4B
FAM220A
ATP2C1
PDCD2
NOL8
CENPP
NDUFAF5
ESF1
MAD2L2
TXNRD1
FUT8
ARID5B
EFS
CRMP1
DMRTA2
TIMM44
GLRX2
AHCY
OR8A1
PLEKHG1
DACT3
NODAL
OLFML3
DNA2
SLC44A2
TUBB3
SLC43A2
TNNT1
GUCA2A
MTUS1
SLC25A24
WNK3
TACC1
PRR15
GATA6
AACS
LRRC2
CFAP20
ATAD2
ZNF253
E2F3
TMEM258
FEN1
CCDC90B
ABL1
ZNF546
SULT1A4
SULT1A3
RASD1
NUTM1
NOP10
TCF4
MAST4
NEMF
ZNF85
DYRK1B