ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852813 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◣ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
ARID2
CELF3
PLPP2
CCPG1
C15orf65
PTMA
TES
PIPOX
C2CD4D
NOTCH1
FAM227A
CBY1
MTF2
WFDC8
GGH
ARPIN-AP3S2
ARPIN
GRK6
CDH18
NFIB
HGS
ARL16
TMCC1
ZSCAN2
SNAPC3
VWA2
IFRD1
TARS3
ZBTB45
DCSTAMP
PLEKHG1
PLCH1
SYBU
NDUFB5
MRPL47
ZNF775
LPP
CDK5R1
FUZ
HMGB1
GSN
CCT2
HMGN1
YEATS2
ESRRA
SINHCAF
SAPCD2
KCNN2
HES5
SIX2
SRGAP1
GSTP1
VASH2
KDM2A
SEPTIN9
LTK
CCL26
MARCKS
SLCO5A1
IQCH
AAGAB
SLC12A7
SH3GL3
SNX27
KMT2B
BMPR2
AUH
ERMN
SACS
H4C15
H4C14
LTBP1
SYNCRIP
HDAC9
TIA1
KLF7
NEBL
TMPRSS7
YWHAQ
FBXL19
CFL1
TJP2
POLB
SPRY4
SYNE2
ST7
LY6G6D
KIF21B
DHX8
ARIH1
STAU2
MACROH2A1
CYTH2
VEZT
FGD6
SLC25A36
MSANTD4
CPVL
METTL11B
HOXA9
TMEM132A
DDX17
ST6GAL1
ESRP1
OAZ2
CBX1
ZDHHC5
ST3GAL4
STAG3
GPC2
TMPRSS4
CSRNP2
PHF5A
ACO2
DOCK9
PPIA
ZNF687
MAT1A
HNRNPDL
ENOPH1
PDIA4
TMUB2
SLC16A13
MKRN3
PMEPA1
NADK
SPDYE10P
HES6
TRAK2
STRADB
SRRM4
SC5D
CPSF4L
CLEC9A
DAGLB
MTDH
ZFC3H1
THAP2
JUP
USP54
HSD3B1
ETV1
PPDPF
RAB30
ZBTB8OS
RBBP4
CTTNBP2NL
TRIB1
NARF
KLHL24
SLC33A1
NUP160
BORCS6
TIAL1
ZNF304
EYA1
ZNF358
PER2
LPAR6
ARID5A
S100A2
PLEKHJ1
DDX58
CHN2
VGF
ALDH3A1
ZNF428
SYTL2
GADD45A
CHD6
GPSM3
TNRC18
UBQLN4
LAMTOR2
HEBP2
RIMBP2
IGF1
PGK1
GDF5
CEP250
MCM7
AP4M1
UBE2T
GPR1
FAM120B
HIP1R
ANP32E
PTHLH
FNBP1L
MRO
MTA3
KCNG3
SH2B2
NRCAM
FMNL3
NHSL1
CHML
OPN3
MCCC1
MANSC1
DMRTA2
GADD45G
CELSR3
LPCAT4
SPHK1
PIF1
SLC2A4
TSPAN13
NCOA4
UGT1A5
PTPRO
FMN1
AFAP1
LOC389199
MEGF9
WDFY2
SAXO1
RRAGA
PDIK1L
FGFRL1
ETV6
ERV3-1-ZNF117
ERV3-1
ZSCAN9
KIAA1671
SH3PXD2A
GTF2IRD1
H3-3B
ZNF277
DOCK4
LGR6
DLX5
MFSD6
ZNF184
ANAPC15
CNP
PCDHB8
STK32C
LRRC27
INSM1
USP6NL
PARVG
ZNF273
ZNF180
ZBTB6
EIF3E
SH3BP4
THEM4
BAZ2A
RFX5
C20orf96
HACL1
BTD
TUBB
KNTC1
IL23A
H3C6
SHF
TLX3
LDB1
ZCCHC12
ZSCAN31
THEMIS
MAP4K4
H2AZ2
ID1
YPEL1
OR4C6
TTC23L
EMSY
SRSF7
FOXO6
PTX3
TOMM40
KRT8
PSMB7
BTG1
TUFT1
RNF157
GLI2
TLN2
BAZ1B
TUT7
ZNF195
NKIRAS1
RPL15
USP22
BBS7
DPP3
CCDC88A
MAFG
ADRM1
SDHD
CITED2
ZNF106
ZBTB38
ACTB
BRINP2
SPATA12
STAT3
RNF145
RNF38
FTH1
LIMCH1
MIDN
ZNF250
CIART
LMO4
LZTS1
RRBP1
ARHGEF38
GREB1
ZNF107
SEMA6C
MGAT5B
PWWP2A
LNX1
PLEKHG4B
NFE2
RBP1
ZFP62
TCF4
CDK5RAP2
RAB11B
TAX1BP3
EMC6
NTMT1
HNRNPAB
GOLGB1
SASH1
SLC9A2
TMEM211
HSPA13
PDP1
DUSP7
TRMT2A
RANBP1
OARD1
NFYA
PNRC1
EIF4A2
POC1A
FAM76B
CEP57
HECTD4
NAP1L4
SLC25A11
RNF167
PPME1
C2CD3
EXPH5
TAF1A
MRPS2
C9orf116
ZFP69B
DST
TOMM40L
CCNJ
AGO1
STMN1
ZSWIM4
NELFCD
FILIP1L
ARMC3
PON2
WDR36
DNMBP
NDUFS5
OSBPL1A
PLXNB2
ZCCHC14
KANSL1L
GOLIM4
PELATON
WASHC3
PARP1
SLC35E2B
YWHAG
CSRNP3
KCNMA1
GET3
TESK2
ZNF92
EGR3
ZNF84
ZBED5
FAM83A
SCNM1
LYSMD1
CAPRIN1
SFPQ
C6orf132
RAI14
ZNF736
LGALS9
EXOC5
AP5M1
RPUSD4
FAM118B
CRYAB
RSPH14
ZNF630
POLR3C
RNF115
MRPS30
NAGPA
CD2BP2
CACHD1
CTH
VANGL2
PELI1
TLE3
HOXD3
PAIP2
TMEFF1
HEXIM2
GPR137
PPP1R2
TCIM
C15orf40
HES2
ZCCHC8
TMX2
MED19
CEP170
SDCCAG8
CNKSR3
POU2F1
VPS50
HEPACAM2
LRRC8A
KYAT1
MOSPD3
NFX1
GDPD1
PTK2
ETV4
DDX3X
ACTR1A
CBX2
FZD2
HK2
FBRS
ZNF720
ZSCAN16
KMT5A
PACSIN3
SUMO2
NASP
COPS7A
ARNT
STC2
KRTAP3-1
ISL2
ZNF506
GOLPH3L
ADAR
IP6K2
PHF3
TMEM44
PRSS23
ERGIC2
WBP11
C12orf60
SRPRA
SESN2
CUEDC1
NOTUM
CHRNA1
PRKRIP1
DYRK1B
DIPK1A
SCAF4
MICAL3
NNT
PEX11G
HILPDA
DIABLO
EGFLAM
DUSP12
RTBDN
PIMREG
DDX5
PTPRK
CHD1L
PRKAB2
PPFIBP1
MMD
SNAI2
NPDC1
LPIN1
PHC2
EXOC6
GPR15
HSPH1
RTN4
SCAF11
AP3M2
RPS6KA2
ZNF680
PLXNB1
DIPK2A
PCDHB13
PHF12
GSX1
CACYBP
NR4A1
LUC7L
ACTR2
MAPKAPK3
CISH
IGSF9
CHMP4B
SVOP
RABGAP1L
FZD1
ICE1
POLR2M
CCDC88C
PRRC2B
ZFAND3
CD300LB
PRKDC
MCM4
SKIL
CYTH1
GOLGA6B
HOXB3
ITGB1
KIAA0895L
AKAP9
TRIM38
USPL1
EIF4A1
PRSS56
S100A4
ASNS
ITPRIP
YLPM1
PRR19
PAFAH1B3
GOLGA6L3
VEPH1
KDM3A
ICOS
ANO6
PDCD6
PGM2L1
COX8A
RAB5C
NEK2
ACLY
CDC14B
SMC4
IFT80
ZNF124
PI4KB
RCOR2
SUSD2
GNB1
PTP4A1
PRDM1
RGS3
ZNF608
KLF12
TNFSF9
RAB2A
FAM166C
DLX1
LLGL1
MYL12A
NBPF12
ADAM10
FGF18
SLC4A7
ST8SIA1
NBPF11
SORD
FERMT1
OGA
ARF4
RSF1
AAMDC
ZMAT2
SCD
DNM1L
DMWD
SIRT1
SPIN1
FUT4
CCNG2
ZBTB26
NUFIP2
ZNF268
RPA2
HSD17B12
ZNF524
FIZ1
TFAP2A
ZBTB10
KPNA4
ZNF292
TNPO1
CACNB3
ATOH8
HBP1
METTL9
GNA12
RAPGEF2
BACH2
TPK1
ZMIZ2
TWIST2
CSNK1E
PCBP1
AASDH
SOX5
SUN2
FSCN1
ZZEF1
CYB5D2
VPS45
SOX6
KIFBP
WASF1
CDC40
ZNF37A
C11orf58
HAGH
FAHD1
FXR2
ZNF708
GPAT4
PIN4
EEF1AKNMT
ZNF747
SH3D19
EMC3
GOLGA6D
MMACHC
CCDC163
GFPT1
MTSS2
MEF2C
CLCF1
RPS11
MAML1
SMARCE1
NCOA5
COX7A2L
ZWILCH
RPL4
ACTL6B
LDHA
SIN3A
ZNF91
TTC13
KLHL26
HCN4
CWC22
GCH1
RPL27
ILF2
OXR1
DDHD1
FBXL7
PCBP4
UTP23
UBL7
MAGI1
SPRED2
SNRPN
GTF2H4
APH1A
MPND
MAPRE2
PSMD14
GTPBP3
ANO8
TUT1
RNF19A
DLG2
TTC21A
GORASP1
TMEM126B
SLTM
FXR1
PNRC2
H2AC19
H2AC18
RTRAF
ASF1A
FBXO46
SLC39A10
UBTD2
SLC25A25
NAIF1
FMNL2
MEA1
KLHDC3
SERPINI1
PDCD10
MINDY1
FAU
CEP41
POLR3E
EXOSC2
NDUFS2
DENR
RPA3
CLDN22
RBBP9
NDUFB4
KHDRBS1
UBALD2
DYNLL1
FBXL8
DNAH14
NAALADL2
UFD1
CDC45
KDM1A
PHF14
CBR4
THRA
SLC20A2
FAM221A
PLK2
AMMECR1L
COL18A1
PDE8A
CCL2
ARHGAP18
MAPK8
TMEM9
EFR3B
GPR89A
TIPARP
GPT2
PODXL
GET4
PPP1R7
PASK
TMEM18
PAG1
LRRC23
APBA2
SNX30
FICD
FGF3
FOXP1
PIK3R3
PAXBP1
PPP1R15A
ATXN7L2
SSR4
IDH3G
SLC11A2
FRAS1
PPP1R12B
HARS2
HARS1
HOXB9
DISP3
EMC9
PCCA
EFCAB12
ZNF500
TCOF1
PSD
FBXL15
MANEAL
HDGF
PRR15
ZIC4
GPBP1
CABYR
SLC7A11
ZNF197
DGCR6L
TSNAXIP1
RANBP10
BLOC1S4
RIOX1
NOTCH2
SDK1
MTHFD1
PRKRA
PJVK
EBAG9
F11R
EP300
CCNT2
STAT2
SRP9
ADH4
E2F7
TCF12
TMEM249
ELP1
ABITRAM
BAHCC1
XKR4
IPO11
PLCG1
TMEM14B
CDC37L1
TFF3
CDK12
PTCD2
MRPS27
VMP1
PTRH2
NFATC2IP
NUDT3
KIDINS220
ATG16L2
PBLD
HNRNPH3
WDR87
SIPA1L3
ZNF669
BOD1
CAVIN2
BTG4
MYCL
APLP1
HOATZ
STRIT1
RBBP6
RNF43
ZNF8
NCL
CDK5RAP3
KIAA0232
PRKCI
PPM1B
SLC45A4
NRXN3
GOLGA6L4
ZNF140
TSTD2
NCBP1
AKR1A1
SRSF6
TMEM52
TCERG1
TUBG1
RETREG3
PIP4K2C
POLR2H
EVL
SEC22A
MYO10
CADPS
ULBP2
CAMSAP1
TBC1D31
SPRING1
RNFT2
ARHGAP24
GID4
ATPAF2
PCBP2
PCNX3
GFOD1
OGDH
CFAP20
DAAM1
TIMM10
KRIT1
ANKIB1
PALMD
PRDX1
HIGD2B
BBS4
DNM3
C10orf90
WNT5B
ZCCHC18
MPRIP
ZNF724
ZNF714
EXD1
CHP1
WDR72
KLF11
CCDC146
KBTBD2
CD55
HIBADH
ATXN7L3B
ULBP3
CEP63
ANAPC13
TSPAN19
LRRIQ1
SRP14
RABL3
GTF2E1
UBE2N
FAM47E
ING3
SCARB2
PTPRM
IRF4
TIGD5
EEF1D
PDE4D
FEM1A
FGF19
MAPK14
SLC3A2
BZW2
ANKMY2
VCPIP1
C8orf44-SGK3
HES4
RPIA
SHPRH
SPATA6L
PLPP6
TLNRD1
HEY1
RUFY1
FAM174A
ZNF672
CDCA4
GPR3
TMPRSS3
GPAT3
EMP1
NBEAL1
FAM72C
DBNL
POU2F2
WTAP
SOD2
ZIC1
NELL2
KRT80
NOL6
VOPP1
RCOR1
DAD1
TBPL1
XRN2
ZNF606
VGLL4
AMIGO3
MYLK3
IL37
IER5L
SPAG9
CHD8
CCAR1
NCBP2AS2
NCBP2
CIC
CCDC50
ARID4A
TMEM71
PHF20L1
STT3B
TLL2
BRI3
MIGA2
LYPLA1
LAMB3
FAM220A
ARRDC3
ENSA
GDPD5
VSTM2A
KCNJ9
ITGB6
RASAL2
WDR33
ZNF253
RPS6KB2
ARL14EP
DNTTIP2
ZNF143
MARCHF6
CNR1
CDK13
EPHX4
WFDC10B
GOLGA6C
KRT19
STOX2
RNF44
NEMF
ATF7IP
DDAH2
MMS22L
DOK7
CPLX2
KLF5