ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
PAMR1
CP
NDUFB5
MRPL47
GRK6
MTF2
F11R
TES
GADD45G
TNRC18
ZNF775
PTMA
VIT
HMGB1
FUZ
NWD1
FAM227A
CBY1
MANSC1
KMT2B
ANXA11
SLC20A2
HGS
ARL16
EPB41L1
PLPP2
IFTAP
ARID2
CNP
MEOX1
NOTCH1
DDX17
ETV1
CEP41
DST
TRMT2A
RANBP1
WDFY2
CYP21A2
PHF5A
ACO2
PXMP4
JUP
ZBTB34
IQCH
AAGAB
NDE1
ZSCAN2
UBTD2
TMEM132A
SMC4
IFT80
NFIB
IFRD1
SEM1
MARCKS
KCNN2
AADAC
SIX2
PPDPF
CLDN4
SNRPE
EHF
TUT7
SLC7A5
HDAC9
DDX5
ZFAND3
CCT2
DHX8
LPP
GALNT11
NRCAM
YEATS2
NKIRAS1
CSTA
MTRNR2L8
MCCC1
OGA
ALG9
PTCHD4
DAGLB
ZNF608
BFSP1
TMUB2
CAPRIN1
KRTAP3-1
SMARCAD1
NPIPB12
GPR87
H3-3B
CFL1
VGF
C20orf96
RPL27
GGH
SPIN1
WDR74
ATAT1
EIF4A2
GET3
HMGN1
C3orf20
PLEKHG1
CCL26
NELFCD
SYNCRIP
NACC1
TMX2
MED19
TJP2
VEZT
FGD6
CTTNBP2NL
LDLRAD3
CHD6
CDK5R1
EGFR
RAPGEFL1
ETFB
PMEPA1
GDF5
CEP250
KIF21B
MSANTD4
MUC20
ZFC3H1
THAP2
ID1
ACTR2
POLB
ISL2
CTXN3
DLX5
ESRRA
KDM2A
ADRM1
RAPGEF5
TNFAIP8
DGLUCY
ERV3-1-ZNF117
ERV3-1
CHMP4B
NPIPB8
SLC4A7
FNIP2
DMRTA2
KRT15
KRT13
PIN4
TCF12
ITPKB
ARHGEF19
SNAPC3
GSN
MEF2C
ZNF277
DOCK4
ZBTB40
ALDH3A1
LNX1
MCM7
AP4M1
RBBP9
TP63
RNF43
SPRY4
POLR3E
UFD1
CDC45
DSC2
KMT5A
RBM47
ESRP1
HNRNPUL1
IL1A
PDIA4
BCO1
TIA1
HLTF
HBP1
EHD4
CCDC43
ARSG
PROSER1
NHLRC3
KIAA1549
RTP1
TUT1
REST
SACS
SOX6
PIPOX
METTL11B
DNMBP
NRG1
SRRM4
OBI1
PRICKLE1
SNRPN
FLAD1
MED12
HESX1
TDGF1
VENTX
NADK
PSMD9
HPD
WFDC8
ZNF343
CELF3
FGD4
CER1
IER5L
DNMT3B
CNPY1
LIN28B
NANOG
FBP1
PPP1R16B
ETV4
MTRNR2L2
CYTH2
FBXL19
RIF1
GIMAP5
KIFBP
TMCC1
FBXO40
ITPRIP
FZD2
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
USP44
GPSM3
NDUFS5
ZNF532
SPIC
WBP1L
FGFR2
PDCL
CDC14B
TUBB
DHX32
EEF1A1
SLC2A14
GDF3
RFX4
LRRTM4
ARIH1
SFRP2
TIMP4
ADA2
DDX3X
NEBL
CARHSP1
FOXP1
ZNF304
SASH1
PGK1
AK4
CAMTA1
SINHCAF
DUSP12
WDR49
AHCYL2
TNC
TOMM40
FAM120B
TBC1D16
NDST1
ACVR1
UGT1A6
MACROH2A1
WNT5B
RTBDN
ALDH7A1
ANK2
VANGL2
ST18
KDM3A
ZNF195
AASDH
SGMS2
AUH
SRSF7
VOPP1
SLC33A1
PITPNM2
OSBPL1A
SLC25A36
DPPA4
SLFN12
CCDC92
CCN2
DICER1
FOXO6
KLF7
PRRC2B
NUP160
DISP3
WDR36
ZSCAN9
SLC16A13
TESK2
GCNT2
CDH10
VASH2
CFLAR
CFAP20
ZNF428
SHF
PIK3R3
BRINP2
PALM2AKAP2
ETV6
STMN1
ADAMTS16
KLF5
DACT3
UBQLN4
F11
HSPH1
CELSR3
CNGA1
CTNND2
RGS3
DPP3
KCNIP4
TACC2
ACSL1
LAMTOR2
RASAL2
CD2BP2
LINGO1
HES5
ANAPC15
ZBTB45
CSRNP2
ZNF202
KNTC1
ERMN
MBOAT2
HOXB1
SH3GL3
GADD45A
TIAL1
SLCO5A1
PLCH1
PIF1
C22orf39
SMAD3
TRDMT1
CD200
LLGL1
CHN2
GEMIN7
LIN28A
EMC9
OAZ2
SLC25A11
RNF167
DCLK1
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
PPP1R18
KLHL24
SDCCAG8
FAM153B
G3BP1
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
CNR2
CAAP1
ST6GAL1
SFPQ
SP5
SNX16
CEP63
ANAPC13
RAD54B
PLAGL1
ZFYVE1
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
SET
FAM181A
ZSWIM4
LIMCH1
ITGB1
ZDHHC5
STK32C
LRRC27
KRT8
IFIT3
DHRS3
LYPD1
ERGIC2
SPATA12
EGR3
CLCF1
EP300
CCDC167
TMEFF1
PES1
PCYT1B
KIAA0895L
HEXIM2
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
IL17RD
ACCS
RNF19A
TRPM3
PCDHB8
E2F7
POLDIP3
MDK
ZBTB8OS
RBBP4
C1R
HNRNPDL
FSBP
NSA2
GFM2
C1orf127
ZNF318
CCDC88A
ADAR
TSNAXIP1
RANBP10
JAG1
IL23A
ENOPH1
SMIM14
ZNF37A
MOSPD3
HSPA13
ZBTB6
TCN2
IPO11
DTNA
ARF4
FAT1
ABCB8
GXYLT2
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
ACTR1A
JPT1
SLC2A11
PDP1
SPAG9
ZNF469
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
PCDHB5
SPAG4
PDE4D
STOX2
SYTL2
AKAP9
PIMREG
LCOR
EXOC5
AP5M1
PELI1
ADNP
ESR1
TCF4
NFE2
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
IP6K2
FILIP1L
ABAT
GALNT8
CLEC9A
HACL1
BTD
ZNF763
RRBP1
AMOTL2
GFRA1
ZNF106
HIP1R
RSF1
AAMDC
TNFRSF21
PSME3IP1
INKA2
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
SIRT4
TMPRSS7
SPHK1
MMP10
RSPH14
RSPRY1
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
ASMTL
RASSF8
SYBU
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
METTL7A
RIMBP2
SMARCB1
SOX5
NASP
MAP2K5
C11orf58
MAP3K9
PCDHGC4
INSM1
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
KLHL5
KLF17
IREB2
ELOVL5
ZNF506
TLE3
DPPA2
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
PROM1
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
CCNG2
ZBTB26
SNX27
RBMX
PAG1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
RPL15
MS4A12
HEXIM1
LTBP1
COPS7A
RAP1A
MIDN
TBC1D31
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
RTRAF
TRIB1
UBR2
HES6
IPO4
SERPINB6
OR13C2
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
DPP4
KANSL1L
TSPAN13
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
GRIN3A
ANKRD65
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
IGF1
FGF19
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CCDC171
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
NCOA4
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
TGIF1
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
FRRS1L
PIK3CA
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
HLCS
RIPOR3
MYO1B
TTI2
TMEM220
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
UFSP2
INTS12
GSTCD
RAB11B
NUBP1
ING4
ZNF286A
WLS
GNA12
DAOA
CHD7
SLC25A25
CABYR
SLC7A11
ARHGAP18
RRAGD
GREB1
LTBR
MCM10
BEST3
TAGLN3
PTPRK
NSMCE4A
MLEC
CCDC124
TRIM38
ODF2
AP3M2
ZFAND6
NRL
DCAF11
PBDC1
MFSD6
ACYP2
NIN
ZNF92
GJA1
NSUN6
ARL5B
PRCC
CNIH4
RAD23B
GPR137
EMID1
EVI5L
SYNGR4
GLI2
ARMC3
ZFHX2
DAAM1
HAS3
ABCA1
CLCN5
BAZ1B
VPS50
HEPACAM2
KHDRBS1
FRAT1
RBM22
ZMAT2
ADPGK
ZNF668
GHITM
KIF3C
BAMBI
SLC6A9
HNRNPAB
PTP4A1
C12orf57
AGPAT1
ZNF197
NAIF1
MRPS15
HK2
PANK2