ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTRNR2L8
GRK6
MTRNR2L2
GET3
FOXO6
G3BP1
EMSY
DACT3
CYTH2
RBBP6
SLC25A11
RNF167
ZNF576
IRGQ
CCT2
KIFBP
SLC25A25
NAIF1
OSBPL1A
FAM102A
ZSCAN18
HGS
ARL16
ZBTB2
SPHK2
H3-3B
ETV4
CLP1
DICER1
RFX4
PLTP
IREB2
CTNND2
HMGB1
REEP6
PCSK4
PELI1
NGDN
PIH1D1
FAM227A
CBY1
WBP11
C12orf60
TESK2
TBRG4
CEP41
HEXIM2
RSPH14
BSDC1
MEA1
KLHDC3
NF2
TMX2
MED19
CHN2
H2AZ2
ASMTL
CDK16
MTF2
ETV1
PTMA
CHMP7
PSMD3
HSPH1
EPHB3
PPME1
C2CD3
PFKM
HNRNPH1
TMBIM6
CCDC169-SOHLH2
CCDC169
YLPM1
TBC1D10B
MYLPF
BTG1
TMUB2
CEP170
SDCCAG8
SENP8
MYO9A
INTS9
HMBOX1
HNRNPL
EGR3
NUP214
TPCN1
IQCD
IPO11
DCTN2
NRARP
PWWP2A
DYNLL1
RNF26
SYNGR4
TRIM28
FXR2
SHBG
TAX1BP3
EMC6
NRL
DCAF11
TOMM40
ELL
AP3M2
GTPBP1
CARM1
TRDMT1
HNRNPC
SPEM1
EHD4
TXLNG
PIK3R3
ACTR1A
CDK12
ZNF286A
MAD2L1BP
GTPBP2
UFSP2
ABHD2
TUT1
ZCWPW1
MEPCE
DDA1
ARHGAP19
RGPD2
RGPD1
PTH2R
ZNF672
KMT5C
CTTNBP2NL
ACTR2
SENP2
SPAG4
HES5
HACL1
BTD
SAXO1
RRAGA
PPP1R16B
STAG3
GPC2
ETV5
ZCCHC8
DSE
TSPYL4
OGA
ZDHHC5
RFX1
WDR81
DHX8
CNOT3
TCTN3
TENT5C
FAM181A
C1orf127
SHC1
CKS1B
MRPL45
HDGFL2
LSM10
TPGS1
ETFB
WBP1
TUBB
RBM23
ZNF775
NUBP1
TEPSIN
NDUFAF8
DCAF15
PODNL1
IFRD2
ZFC3H1
THAP2
ANKRD6
PIN4
DNM2
TOMM40L
SLC25A44
RFX2
VEZT
FGD6
HES6
ABCB4
ZSCAN20
PIF1
CDC5L
CHD6
BANP
DMWD
FBXO46
RNF169
MICOS13
HSD11B1L
MSANTD4
CRISPLD1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
UVRAG
CCDC61
SPRY4
SLC33A1
KIAA0895L
POLDIP3
GNA12
NEURL4
JOSD2
NOTCH1
NOL4
BMF
ZSCAN2
ZNF140
EVI5L
RPS13
KBTBD6
RAB5B
PC
MPRIP
RRP9
PARP3
EMC9
UCKL1
WDFY2
LRRC23
PAIP2B
NAA80
HYAL3
DDX17
TBC1D31
PRCC
SELENOF
HS2ST1
ZFYVE1
GFRA1
SESN2
EPRS1
WDR49
ZNF84
C12orf71
RPS23
ATP6AP1L
CLIP1
GCDH
SMUG1
TMEM256
SP1
KNTC1
XPC
LSM3
TMEM91
B9D2
NEMP1
ZNF195
TCF4
CLPB
NUP62
IL4I1
ATF5
CDC25A
PPP2R1A
DOHH
KHDRBS1
DUSP1
LRRC45
CENPX
HDAC9
FGD4
CELSR3
ILF3
H2AC19
H2AC18
UBE4B
SYMPK
FOXA3
ZNF358
ZNF548
H2BC8
H2AC8
NDUFB5
MRPL47
CCN2
SEL1L
ZBTB20
NDUFS8
MRPL24
ITFG2
TREX1
VPS26C
SRF
MOSPD3
IFT27
AGPAT1
RNF5
TAF13
HBP1
LUC7L2
GGPS1
ARID4B
FMC1-LUC7L2
FMC1
SLC35E2B
CDH2
MAFG
BLOC1S4
COPZ1
UBE2S
KDM2A
CFL1
ERGIC2
RPL27
PDP1
TRAPPC3
HIF1AN
KIFC1
HEXIM1
IPO4
NDUFA5
JAG1
SUFU
PPP1R2
KHSRP
WDR59
RBM15
BABAM1
NSUN3
DHFR2
SRRM1
SPAST
PHF23
ELK1
IER5L
RPUSD4
FAM118B
TAGLN3
BRCA1
SMARCAL1
FAM219A
DNAI1
TICRR
LIN52
ALDH6A1
NAA40
CNIH4
RPS11
TRIOBP
TRMT1L
SWT1
ZNF823
MPV17L2
EHBP1
CD2BP2
RAB5C
FAM185A
ATF4
TOR2A
TRAF7
SF1
ELP5
CTDNEP1
CDK4
SINHCAF
TSNAXIP1
RANBP10
EXOSC5
BCKDHA
WBP1L
NNMT
E2F1
PI4K2A
PYCR3
POLRMT
NASP
MMRN1
ZMAT2
NFATC2IP
EPC2
MEGF8
IQCG
RPL35A
MMACHC
CCDC163
PPP1R15A
C1orf189
USP1
ADAT1
SIX2
ITGB1
CCDC146
GID4
ATPAF2
SLC35B4
PPP6R3
ZSWIM4
IFTAP
RND1
NCLN
LPIN2
PIP4P1
DISP3
IP6K2
DNM1L
PHF12
KBTBD3
AASDHPPT
ZNF653
FLAD1
DGLUCY
BBS7
SMARCB1
GHITM
PHB2
ERCC6L2
RLF
PCF11
RPS6KA5
NUMB
UBXN4
SPC24
SPRING1
RNFT2
H2AX
CIC
CCNT1
ZNF547
TRAPPC2B
CDC6
BFSP1
ARIH1
COX8A
CX3CL1
PRPF38A
ORC1
PPP1R35
RPL29
CALR3
C19orf44
PRKRIP1
ING4
TMEM109
CAMTA1
VGF
GBF1
NUMA1
LRTOMT
WDR19
GNB2
PKNOX1
ZBTB38
FRAT1
DTD2
KATNB1
TUBA1A
DAD1
ZNF189
MRPL50
TSPYL1
GADD45A
SCOC
PANK2
STRADA
ESYT1
MTCH2
TCERG1
EMC3
CDK5RAP3
FOS
PDXP
SRPRA
GOLGA5
INTS4
TENT5B
POLK
CERT1
C16orf91
PTBP1
SAC3D1
TRAK2
STRADB
ATG2A
DGAT1
UBQLN4
LAMTOR2
ADAR
TLE3
UBR2
PTP4A1
EEF1AKNMT
MXD1
WDR87
SIPA1L3
UBE2F
GADD45B
MAGI1
PUM3
HIBADH
RACGAP1
POLR3H
BBS12
HSPA1B
FBXL19
CFAP20
CNN3
MPND
SRP14
PCNX3
ZNF513
MAP2K7
RAB8A
PPM1E
C10orf120
ZBTB37
ORAI3
ANKRD54
SIDT2
PAIP2
PDE4B
LMAN2L
CDK5RAP2
VMP1
PTRH2
ZFP36L1
CAMK2D
RNF10
MTMR12
ZSWIM1
ANK2
RRBP1
KANSL1L
EIF3F
TCIM
ANKHD1-EIF4EBP3
ANKHD1
FABP7
L3MBTL2
LARS1
MECP2
EGLN2
TTF2
KMT5A
FANCC
MRPL2
KLC4
FOSB
SCHIP1
NUCB1
SNRPD2
QPCTL
RPL21
ABAT
PCBP2
PRPF19
OSBP
PCM1
RPS26
PSMC4
E4F1
CEMP1
RC3H2
U2SURP
PMM1
NAA35
ARFGAP2
PGM1
TAB1
PCYT1B
PGM2L1
GPBP1
KIF3C
MTRNR2L10
DDX49
COPE
MORF4L2
ZSWIM8
LIN37
FBXL12
TSPAN17
ALK
NEBL
CALCOCO1
ZBTB5
WBP2
DDX39A
CENPC
EFCAB6
PGP
ERCC1
SLC4A2
CDK5
CIAO2A
UBL7
RPS24
BUB3
EFR3B
METTL16
EFHC1
PDK3
CUL3
SASH1
HNRNPUL1
TSPAN19
LRRIQ1
CCAR1
DUSP7
STAU1
MAP3K13
DDX27
PGAP2
WIPI1
RALGAPA2
ACTN4
FUZ
ADNP
NR2F1
ABCA5
TBC1D23
SREBF2
LRRTM3
ZNF254
USP30
C2orf80
CCNG1
ZNF138
GPR180
PPP4R3B
SACS
BORCS6
ILF2
ERICH6B
DAZAP1
TRAPPC6A
BLOC1S3
HNRNPA1
CBX5
KBTBD7
UPF3B
ZNF417
GPR3
MRPL17
MFN2
EP300
RSF1
AAMDC
FEM1A
TCF7L2
DUSP6
EIF4A1
SZRD1
CCNT2
KIF27
RPL9
LIAS
SDE2
STX12
PKD1
NARF
NBPF1
FH
ARL13B
AP3D1
FAM98A
KDM4B
DDTL
DDT
YIF1A
ITGB8
RMND1
VTA1
NMBR
SLC39A9
ERH
GPAT4
SCAF11
ARMT1
SPATA24
EFTUD2
CCDC103
RNF40
CCDC189
BRD3OS
ZSCAN9
ANK3
SSR4
IDH3G
DNAJC12
SARNP
ORMDL2
TM9SF4
DHX16
HP1BP3
ZNF862
DOT1L
EPB41
ATG5
DPP3
ZNF593
C1orf232
C9orf85
ABHD17B
NPAT
ATM
PPP1R21
CCDC181
MCM10
DNTTIP2
TUBB4B
PMVK
YPEL1
PRRG2
NOSIP
NAPA
CXXC1
SNAPC3
ESRRA
CHD8
ZSCAN31
XAB2
ZIK1
SPTBN1
ANKRD36
ABI2
PIK3C2B
TADA1
WASHC3
PSMC5
FTSJ3
PARS2
ZBTB48
SAP30BP
RECQL5
NEDD9
TMEFF1
ACTL6A
UBE2C
DMXL1
FAM200B
KAZALD1
DTNA
PEX11G
RBM22
MRPS14
CEP128
USF3
EPHB1
NME1-NME2
NME1
STARD4
CCDC12
RFC2
CASTOR2
RPUSD1
CHTF18
ETFDH
C4orf46
USP54
MAPK14
CREM
ENSA
PGLS
P3H1
GPN3
FAM216A
CDCA4
EIF2S3
AKTIP
LMBR1L
CAPZA2
FZD2
AKAP9
LDB1
COX7B
CTNNA1
ZNF764
TPRKB
FBXO34
LRRTM2
TMEM115
LYPLA1
DNAAF3
USPL1
TNRC6B
HNRNPR
COG3
ZNF416
DRG2
NATD1
PWP1
NDUFAF5
ESF1
CACUL1
SUCLG1
UBA52
DNAJB5
THRAP3
SMPD2
PPP2R3B
PPIL6
PDIA4
EIF1AX
ALG8
EBNA1BP2
CFAP57
UBL5
CEP63
ANAPC13
INTS12
GSTCD
ANP32E
ZNF709
NUDT2
KIF24
SLX4
FICD
SPSB2
EIF3D
UFD1
CDC45
CCDC130
SAPCD2
ACYP2
ASF1A
CRADD
PSME4
ZNF738
BAG6
FTSJ1
DENR
GTF2H2C_2
FZR1
GTF2H2
ISY1-RAB43
ISY1
CHMP5
BAG1
WDR62
THAP8
PCBP3
TM2D2
RBX1
DPYSL5
ADAM9
PDPN
ZNF304
SYNCRIP
ZBTB40
ARF4
TUBG1
RETREG3
PAK1IP1
C6orf52
TMEM258
FEN1
CNNM2
SERTAD3
SMG7
ALDH7A1
SLC25A36
PES1
ADRM1
ZNF106
COPS7A
MEGF9
C17orf77
DDX10
JAM2
RFWD3
IFI6
TXNDC16
GPR137C
FARP2
BSN
SRGAP2
FAM72A
CLIC4
POLR2E
SMARCD1
UVSSA
GOLGB1
HIP1R
ST7
CACYBP
SALL4
YPEL5
PABPN1
RWDD1
PRR14
XPO7
HSPBP1
FAM86B1
GDF5
CEP250
PNN
PPP6R1
ALAD
PHB
DCLRE1B
AP4B1
PRPF4
CDC26
CEP152
AVPI1
NABP2
IPO9
WFDC8
AFAP1
LOC389199
SYNRG
SASS6
TIMM10
ING2
TEPP
AP2S1
CREB3L2
C1orf21
NUDCD3
SMIM13
PDAP1
BUD31
LONP1
CATSPERD
PSMD2
SETX
ANAPC15
TIAL1
CLIC1
CENPA
LMO4
KNL1
PRMT5
SPEF1
NCL
GOT1
ATP5F1B
TIMM10B
ARFIP2
FKBPL
MST1
RBMX
G3BP2
ZWINT
NAA38
CYB5D1
CBX8
SETD3
CCNK
SCLY
MXD4
PHF5A
ACO2
PER2
MTUS1
SVOP
RRAS
UTP3
DNAJC21
SLC36A1
DENND4A
MBD4
IFT122
RSU1
TMEM170A
OTUD3
ACOX3
TRMT44
ALS2
MRPS31
RPL23A
SSBP2
GRWD1
FAM3C
SHOC2
ZNF782
MTOR
BBIP1
POLA1
LENG1
SARS2
MRPS12
GGCT
ITPRIP
SRSF7
SFPQ
PNRC1
ENOX2
NTPCR
TMF1
HNRNPD
RPIA
SLC35A5
ATG3
ZNRF1
RNF7
RNF20
GUK1
ZNF875
ERMN
ZNF506