ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11919277 | hESC derived neuromesodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◣ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

CER1
METTL11B
VENTX
MTF2
REST
VOPP1
SP5
GIMAP5
LIN28B
WBP1L
SACS
PSMD9
HPD
DAOA
MACROH2A1
SLC7A5
WNT5B
KCNIP4
PRICKLE1
CCDC169-SOHLH2
CCDC169
CCDC92
PRSS56
NRG1
LINGO1
AK4
ALDH3A2
ZNF649
MDK
GSN
PLPP2
PMEPA1
IL17RD
HESX1
ZNF343
PIPOX
DCLK1
FAM120B
FBP1
SRRM4
F11
NFE2
FBXO40
IER5L
CNPY1
LOC107986453
TACC2
ANK2
DHX32
GDF3
DNMBP
CDX1
DKK4
TDGF1
SNRPN
DDX3X
NRARP
TBC1D16
FAM153B
TLE3
DACH2
ST18
SOX6
CCN2
DDX31
CARHSP1
NADK
HAS3
PPP1R16B
C16orf78
VANGL2
FAM227A
CBY1
OBI1
KIFC3
ODF2
STRA6
GEMIN7
INSM1
MPZL2
ZNF202
MRPS15
SUCLA2
RIF1
DDX59
SLC2A14
DAGLB
LRRTM3
CAPRIN1
IFRD1
TIMP4
NANOG
TCHP
GADD45G
OCLN
HLCS
AHCYL2
FSTL5
HOXB1
YWHAQ
RIMKLB
PPP1R18
ADA2
KIFBP
HIP1
RNF43
AUH
DKK1
PCDHB8
CPVL
PKDCC
C22orf39
STMN1
PITPNM2
CFLAR
HDAC9
PES1
TCN2
FZD2
SET
PCDHGC4
MED12
TMCC1
SNAPC3
ST6GAL1
ACVR1
ZBTB45
ABCB8
TNFRSF19
GPSM3
PLAGL1
ILDR1
KDM3A
COMMD7
WDFY2
SAMD3
IGDCC3
DISP3
DST
ZCCHC14
RFFL
VASP
OCIAD2
SMAD3
RBP1
KMT2B
PHLDB2
SASH1
AKIRIN1
ZSCAN10
KIAA1522
DPPA4
ALPL
WFDC8
BRINP2
FOXP1
ZFAND3
NDUFS5
TJP2
TRPM3
LIN28A
GREB1
ETV1
WDR36
NOD1
MEIG1
GPC6
ITGB1
NODAL
CELF3
ETV4
LGR6
SPAG9
DUSP12
C6orf132
CDH6
SPIC
VRTN
SPATA12
RTBDN
KLF7
FGFR2
PDCL
CFAP20
KMT2A
ZSWIM4
RCOR1
PDE4D
ZNF335
CHN2
TRIM38
LY6G6D
GRK7
AASDH
ZNF101
SELENOP
BMPR2
GSTO1
TRIP10
NEBL
NSMCE4A
GSC
ACSL1
SNX16
PCDHB5
CLDN6
RABGAP1L
HK2
EVX1
ZNF524
FIZ1
GCNT2
HMGN1
EFNA4
CDH10
NCS1
TMEM200B
ARID5A
PTPDC1
PPM1H
CAMTA1
ZNF627
ZNF141
C20orf96
TMEFF1
ZBTB8OS
RBBP4
ESRP1
E2F7
USP53
TEAD3
CYTH2
FILIP1L
KCNN2
IL23A
LZTFL1
ALDH7A1
FBLIM1
CCNG2
PCDHB13
LRRTM4
SLC16A1
SYNCRIP
INKA2
LAMB1
KRTAP3-1
GAS2L1
ICAM3
MEF2C
RAB34
CAMKV
MGRN1
MORN3
POC1A
MAP3K12
NAP1L4
PARP8
ARSI
CEP41
DLG2
EID3
RAB5A
EFHB
MAP2K5
PDPN
ZNF426
BRWD1
UGT1A4
USP44
ZNF48
AKR1D1
PCBP4
SOX5
NOTCH1
SGMS2
CD200
GRB7
C1R
GALNT8
PBLD
HNRNPH3
TMEM123
ARID2
SLFN12
FNDC11
ISOC2
TTI2
EPB41L3
RBBP6
KLF17
CELSR1
STOX2
CDK5R1
TLL2
GLI2
TBX22
ZNF668
QPRT
PSMA1
RBM4B
HSPH1
ID1
HNRNPH1
MTA3
FGFRL1
FAM72D
CMSS1
FBN3
ARHGEF37
PRIM1
UFD1
CDC45
LYVE1
PTMA
IFIT3
TMEM132A
ADARB1
IP6K2
TGIF1
LPIN1
ZSCAN2
TNRC18
WDTC1
ZNF304
DLX5
TBC1D9
HES2
PYDC5
IFI16
OLFM2
SLC29A3
KCNJ15
ST3GAL4
SMAD2
BFSP1
ZNF630
SPRED3
KIF3C
LRP6
HELLS
ZSCAN9
WTAP
SOD2
ATF4
HEXIM1
NUP160
ABCB4
CXADR
TP53INP2
MAPKAPK3
CISH
PCDHA10
RBL1
KRTAP13-3
LYPD1
RAD54B
FSBP
MAD2L2
DRAXIN
MYO15B
SEC22C
SS18L2
DPP3
THEM4
CDC25B
AJUBA
FRAT1
HBP1
SHF
CBX2
PSMG2
CEP76
PIN4
MYO1B
EVI5
NOTCH3
MSANTD4
NDUFB5
MRPL47
HMGB1
FUZ
GRK6
FLAD1
DDX17
FGD4
PHF5A
ACO2
DNMT3B
MTRNR2L8
MTRNR2L2
IQCH
AAGAB
FBXL19
ITPRIP
HGS
ARL16
ZFC3H1
THAP2
CCT2
ZNF532
CDC14B
TUBB
ZNF775
DGLUCY
MCCC1
EEF1A1
RFX4
ARIH1
SFRP2
TES
KDM2A
GET3
PGK1
SPRY4
SINHCAF
WDR49
PLEKHG1
H3-3B
TNC
TOMM40
NDST1
UGT1A6
PDIA4
CHD6
SIX2
PXMP4
ZNF195
SRSF7
SLC33A1
OSBPL1A
SLC25A36
DICER1
FOXO6
MARCKS
CFL1
PRRC2B
NRCAM
SLC16A13
TESK2
TMUB2
VASH2
WDR74
EPB41L1
ZNF428
PIK3R3
OGA
PALM2AKAP2
ETV6
TRMT2A
RANBP1
ADAMTS16
KLF5
DACT3
UBQLN4
POLB
CELSR3
CNGA1
CTNND2
RGS3
DHX8
LAMTOR2
RASAL2
CD2BP2
HES5
ANAPC15
CSRNP2
KNTC1
ERMN
MBOAT2
SH3GL3
ESRRA
GADD45A
CP
TIAL1
SLCO5A1
PLCH1
ISL2
PIF1
VEZT
FGD6
TRDMT1
LLGL1
EMC9
TUT1
OAZ2
SLC25A11
RNF167
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
KLHL24
SDCCAG8
G3BP1
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
RAB30
EMSY
CNR2
CAAP1
CTTNBP2NL
F11R
JUP
SFPQ
CEP63
ANAPC13
ZFYVE1
GOLGB1
TLX3
BORCS6
H4C15
H4C14
FAM181A
LIMCH1
ETFB
ZDHHC5
STK32C
LRRC27
KRT8
ZBTB40
DHRS3
ERGIC2
YEATS2
EGR3
CLCF1
EP300
CCDC167
PCYT1B
KIAA0895L
HEXIM2
SAXO1
RRAGA
PWWP2A
ADRM1
ACCS
RNF19A
ATAT1
POLDIP3
HNRNPDL
CNP
NSA2
GFM2
C1orf127
ZNF318
CCDC88A
ADAR
TSNAXIP1
RANBP10
JAG1
HLTF
ENOPH1
TIA1
SMIM14
ZNF37A
MOSPD3
HSPA13
ZBTB6
MANSC1
IPO11
DTNA
NKIRAS1
ARF4
RPL27
FAT1
GXYLT2
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
PSMB7
CNKSR3
AFF1
ACTR1A
JPT1
SLC2A11
PDP1
ZNF469
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
SPAG4
SYTL2
AKAP9
PIMREG
LCOR
EXOC5
AP5M1
PELI1
ADNP
ESR1
TCF4
GDF5
CEP250
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
TSGA10IP
UQCRQ
GDF9
SPHK2
ABAT
LPP
CLEC9A
HACL1
BTD
ZNF763
RRBP1
AMOTL2
GFRA1
ZNF106
HIP1R
RSF1
AAMDC
VGF
TNFRSF21
PSME3IP1
CDK12
SLCO4C1
PKNOX2
KLHL4
POLR3E
SIRT4
TMPRSS7
SPHK1
MMP10
RSPH14
RSPRY1
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
ASMTL
RASSF8
SYBU
PTCD2
MRPS27
ZCCHC8
STAG3
GPC2
METTL7A
RIMBP2
ZNF608
SMARCB1
NASP
C11orf58
MAP3K9
TINAGL1
PAIP2
BLOC1S4
DERA
GRHL2
PTGS1
EGFR
KLHL5
IREB2
ELOVL5
ZNF506
DPPA2
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
PROM1
TUT7
DDX5
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
ZBTB18
BCL9
ZBTB26
SNX27
RBMX
PAG1
HNRNPUL1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
RPL15
IFTAP
MS4A12
LTBP1
COPS7A
RAP1A
MIDN
TBC1D31
POU2F1
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
PWWP3A
PNRC1
CHD8
BCAT1
CTH
SPRING1
RNFT2
RBBP9
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
UBTD2
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
RTRAF
MED19
TRIB1
UBR2
HES6
IPO4
SERPINB6
OR13C2
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
OGT
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
GAS2L3
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
SMC4
IFT80
DPP4
KANSL1L
TSPAN13
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
ANKRD65
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
IGF1
FGF19
APH1A
ZNF273
PPP1R15A
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
CCDC171
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
BPNT2
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
ACTR2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
SCNN1A
ST7
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
TTC39B
DOCK9
NCOA4
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
ZSCAN18
SLC4A7
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
XPC
LSM3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
RBM47
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
FRRS1L
PIK3CA
NDE1
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
RIPOR3
TMEM220
EFCAB8
DCLRE1C
DDA1
MEA1
KLHDC3