ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407083 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◣ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SINHCAF
NDUFB5
MRPL47
MTF2
FUZ
FAM227A
CBY1
PTMA
PLPP2
CLCF1
TGIF1
HMGB1
FBXL19
NOTCH1
ZSCAN2
NDST1
IQCH
AAGAB
DST
PTPRH
VAMP5
GLI2
PUS10
KMT2B
ERGIC2
LYPD1
CEP63
ANAPC13
DNM1L
F11R
MYL12A
VOPP1
DDX17
GPR39
CPNE2
SRI
WDFY2
H4C15
H4C14
CHD6
HGS
ARL16
SYBU
DPP3
GRK6
ITPRIP
KRT6A
NEBL
CNP
CFL1
OGA
ISL2
SPRY4
MCM7
AP4M1
FGF19
FAM220A
ST8SIA1
PHF5A
ACO2
ANKRD65
IFRD1
ARIH1
SLC33A1
RHOBTB2
HIPK1
MCCC1
HSD17B3
ZFC3H1
THAP2
KRT15
PSME3IP1
RSPRY1
NDUFS5
TNFRSF21
NDE1
ITGB1
NSA2
GFM2
SPHK1
CCDC88A
AMN1
MEF2C
PIF1
DAPP1
ZNF428
DCLRE1B
AP4B1
ALDH7A1
MTRNR2L8
OGT
H3-3B
SLC12A7
DNAH5
DCTN1
NTMT1
G3BP1
TPRKB
TMCC1
MRPL21
IGHMBP2
SLC25A11
RNF167
ZNF37A
ACP3
RTBDN
CCL26
TINAGL1
TNFAIP8
TLX3
IPO4
PTCHD4
CDK12
EGFR
HDAC9
VASH2
NPIPB12
MYL12B
WBP11
C12orf60
CUEDC1
SPINT1
COPS7A
CAPRIN1
TJP2
MAP3K9
TSNAXIP1
RANBP10
FZD1
OARD1
NFYA
ACTR1A
NR1D1
KDM2A
GET3
MUS81
RASA3
ESRP1
SMC4
IFT80
GDF5
CEP250
KDM3A
RAB5C
PIK3C2G
SIX2
HNRNPC
NCBP2AS2
NCBP2
SLC25A45
OAZ2
TOMM40L
SVIL
OLFML3
JUP
SLC39A12
TIA1
NUP160
SLC16A13
SPATA12
CNIH4
RAPGEFL1
TMUB2
KNTC1
NDUFS2
TBC1D17
AKT1S1
TTF2
EMC9
HNRNPDL
ENOPH1
RPS6KB2
SH3GL3
RBBP8NL
AADAC
PDIA4
KPNA4
ZSCAN9
KLHL24
CD2BP2
POLDIP3
VGF
SLC4A7
EXPH5
SLC22A23
SPRED2
G3BP2
C2CD5
POLG
ZNF195
EIF1AD
BANF1
CFAP20
KRTAP3-1
PLEKHG1
SOX6
C11orf58
CYTH2
BORCS6
BCAS2
SPAG4
ZNF785
ING4
LGALS8
ZBTB6
NCOA4
H4C12
CTXN3
LDHB
CSDE1
ETV1
NEK10
CCDC30
SUN1
DHX8
YLPM1
FAM83B
PSMD3
WDR36
SHF
EP300
SFPQ
RNF43
ZNF106
SIRT4
INTS9
HMBOX1
UBR2
KSR1
KLK6
MSANTD4
ZCCHC14
LNX1
YARS2
NDUFS8
TUBB8
EIF3E
TBC1D31
CEP170
SDCCAG8
LRRC23
MTRNR2L2
TOMM40
H4C9
GBA
IL31RA
FGF1
ATG2A
NCEH1
WBP1L
WDR33
RPL27
ZNF268
PCCA
HSPA13
SART1
AHNAK2
CWC22
PGM2L1
DIABLO
NPIPB6
MIA3
UFD1
CDC45
NFE2L2
ANKRD36
CCDC146
NUDT19
COMMD2
HSPH1
UQCRQ
GDF9
ADGRF4
PHB2
SRP54
VWA5B2
NPDC1
ZCCHC8
TRIP4
TUT1
PRORP
PPP2R3C
CCT2
PIK3R3
KIAA0895L
ATAD2
MAP3K7
SLC25A32
DCAF13
PARP2
EGR3
HEXIM2
YWHAG
PRMT5
CLCN3
GSN
H2BC8
H2AC8
KBTBD6
MRPS23
DAD1
TIMM10
GOLGB1
DDX5
NDUFS7
SRSF6
EMP1
RFFL
PUS7L
IRAK4
TRDMT1
COX7B
FOXA1
SMPD3
COX8A
BAZ1B
PLK3
MTA3
KCNG3
C11orf65
SNRNP35
H4C3
ETV4
C12orf57
NKIRAS1
CREBL2
REST
SACS
PIPOX
METTL11B
DNMBP
NRG1
SRRM4
OBI1
PRICKLE1
SNRPN
FLAD1
MED12
HESX1
TDGF1
VENTX
PMEPA1
NADK
PSMD9
HPD
WFDC8
ZNF343
CELF3
FGD4
ARID2
CER1
GADD45G
IER5L
DNMT3B
DAGLB
CNPY1
LIN28B
NANOG
FBP1
PPP1R16B
RIF1
GIMAP5
KIFBP
FBXO40
FZD2
BFSP1
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
USP44
GPSM3
CEP41
ZNF532
SPIC
FGFR2
TNRC18
PDCL
CDC14B
TUBB
DHX32
ZNF775
DGLUCY
EEF1A1
SLC2A14
GDF3
RFX4
LRRTM4
SFRP2
TIMP4
TES
ADA2
DDX3X
CARHSP1
FOXP1
ZNF304
SASH1
PGK1
AK4
CAMTA1
SNAPC3
DUSP12
WDR49
AHCYL2
TNC
FAM120B
TBC1D16
ACVR1
UGT1A6
C20orf96
MACROH2A1
WNT5B
ANK2
VANGL2
ST18
PXMP4
SLC7A5
AASDH
SGMS2
AUH
SRSF7
PITPNM2
KCNN2
OSBPL1A
SLC25A36
DPPA4
SLFN12
CCDC92
CCN2
DICER1
FOXO6
MARCKS
KLF7
PRRC2B
NRCAM
DISP3
TESK2
GCNT2
CDH10
WDR74
CFLAR
EPB41L1
BRINP2
PALM2AKAP2
ETV6
STMN1
TRMT2A
RANBP1
ADAMTS16
KLF5
DACT3
UBQLN4
F11
POLB
CELSR3
SYNCRIP
CNGA1
CTNND2
RGS3
KCNIP4
TACC2
ACSL1
LAMTOR2
RASAL2
LINGO1
HES5
HMGN1
ANAPC15
ZBTB45
CSRNP2
PIN4
ZNF202
ERMN
MBOAT2
HOXB1
ESRRA
GADD45A
CP
TIAL1
SLCO5A1
PLCH1
C22orf39
SMAD3
VEZT
FGD6
CD200
LLGL1
CHN2
GEMIN7
LIN28A
DCLK1
ARHGAP42
PPME1
C2CD3
WASF1
CDC40
PPP1R18
FAM153B
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
CNR2
CAAP1
ST6GAL1
CTTNBP2NL
ZFAND3
SP5
SNX16
RAD54B
PLAGL1
ZFYVE1
ZNF627
SET
FAM181A
ZSWIM4
LIMCH1
ETFB
ZDHHC5
STK32C
LRRC27
KRT8
IFIT3
ZBTB40
DHRS3
YEATS2
CCDC167
TMEFF1
PES1
PCYT1B
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
ADRM1
IL17RD
ACCS
RNF19A
ATAT1
TRPM3
PCDHB8
E2F7
MDK
ZBTB8OS
RBBP4
C1R
FSBP
C1orf127
ZNF318
ADAR
JAG1
HLTF
IL23A
SMIM14
MOSPD3
MANSC1
TCN2
IPO11
HBP1
DTNA
ARF4
FAT1
ABCB8
GXYLT2
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
JPT1
SLC2A11
PDP1
SPAG9
ZNF469
RGPD2
RGPD1
TRAK2
STRADB
PCDHB5
PDE4D
STOX2
SYTL2
AKAP9
PIMREG
LCOR
EXOC5
AP5M1
PELI1
ADNP
ESR1
TCF4
NFE2
BBS7
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
SPHK2
IP6K2
CDK5R1
FILIP1L
ABAT
LPP
GALNT8
CLEC9A
HACL1
BTD
ZNF763
RRBP1
AMOTL2
GFRA1
HIP1R
RSF1
AAMDC
INKA2
ID1
DLG2
SLCO4C1
PKNOX2
KLHL4
POLR3E
TMPRSS7
MMP10
RSPH14
DLX5
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
ASMTL
RASSF8
ZNF649
PTCD2
MRPS27
STAG3
GPC2
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
NASP
MAP2K5
PCDHGC4
INSM1
PBLD
HNRNPH3
RCOR1
PCDHB13
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
KLHL5
KLF17
IREB2
ELOVL5
ZNF506
TLE3
DPPA2
PRR5L
SDHD
PROM1
TUT7
DNM2
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
CCNG2
ZBTB26
SNX27
RBMX
PAG1
HNRNPUL1
PDE4B
KIF21A
LOC389199
RPL15
IFTAP
MS4A12
HEXIM1
LTBP1
RAP1A
MIDN
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
RBBP9
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
UBTD2
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
RAPGEF5
FAM76B
CEP57
MAP1B
MRGPRX3
PTX3
TMX2
RTRAF
MED19
TRIB1
HES6
SERPINB6
OR13C2
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
ERV3-1-ZNF117
ERV3-1
MAST4
GTF2H4
NUP214
ETFDH
C4orf46
ZSCAN10
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
TMEM132A
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
DPP4
KANSL1L
TSPAN13
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
GRIN3A
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
IGF1
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
CCDC171
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
ACTR2
GRAMD2B
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
HIP1
TTC39B
DOCK9
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NODAL
ZSCAN18
WTAP
SOD2
UBE2T
SUFU
PTPRD
MTHFD1
ERICH6B
SMC3
MTDH
METTL9
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
RBM47
VMP1
PTRH2
CENPA
KDELR2
ZNF548
FRRS1L
PIK3CA
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
HLCS
RIPOR3
MYO1B
TTI2
TMEM220
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
UFSP2
INTS12