ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750797 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◣ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
FAM227A
CBY1
SPATC1L
MTF2
TSPAN19
LRRIQ1
EEF1A1
CT45A10
TMEM217
TBC1D22B
RTRAF
CYP4F11
HGC6.3
SDHAF4
COX18
TMTC3
CEP290
ATP5F1E
TFB1M
WASHC4
TICAM2
PPIL1
THOC3
UBR2
NBPF1
FAM120B
RBM7
C11orf71
SRBD1
PPARD
EBAG9
SOX2
ZFAND3
CTBS
SNTB1
TSEN15
KIFAP3
MTMR2
ZNF322
ZSCAN9
E2F7
RAB18
SLC36A4
SCFD1
CNTN5
TMEM71
PHF20L1
PPP1R12A
MAST4
FRA10AC1
C6orf89
CMTR1
MOCS1
UTP23
PARPBP
NUP37
GORAB
NUDT4
RNLS
CHMP3
USP49
DYNC2H1
PHACTR2
HMGN3
MTRR
FASTKD3
E2F6
TES
SNRPB2
ZNF518A
LRRCC1
HFM1
PDGFD
TMEM14B
POLR2J3
MAPK1IP1L
ME3
FILIP1L
MBIP
BPHL
COL19A1
WDR35
PAG1
CEP126
SH3TC2
JRKL
CCDC82
BAG2
AARS2
HDDC2
STARD4
COMMD8
OARD1
NFYA
DPYD
TMED8
SAMD15
RBBP8
LMBRD1
TDP2
ACOT13
EXOG
ZHX3
CBWD5
CBWD3
CBWD6
GPAM
TMEM260
WDHD1
SOCS4
TDRD7
ZNF451
C2orf73
CCDC59
UTP20
CD83
HEATR5B
GPATCH11
SSH2
EFCAB5
SRPK1
DYNLRB2
HLA-DRB1
GLRA3
BTBD9
PELO
ITGA1
SMIM14
MYL12A
NBN
ZNF330
FZD6
HLA-A
PTCD2
MRPS27
PHLDA1
DYNC2I1
VAPB
ANKRD36B
RIOK1
CAGE1
CXCL2
EFHC1
PRKG2
LAMC2
MRE11
ANKRD49
OR1F12
TOMM34
EIF2AK3
ZNF76
INTS7
DTL
CGRRF1
TNFRSF11B
COLEC10
SAYSD1
DR1
HPS5
GTF2H1
SLC44A3
ARL14EP
RAD21
CAP2
POLN
HAUS3
VRK2
COQ2
CCDC34
MCL1
SRP9
CTNNB1
KRTAP2-4
PIK3R1
CCDC15
HTR7
PGBD1
ZC2HC1C
ACYP1
RNF150
HDGFL1
MRPS18A
TP53RK
PIGC
CEP55
IP6K2
SESN3
DDX10
PIP4P2
TAF7
CAST
DPH6
TMX1
LYPLAL1
RAD51AP2
KRTAP9-7
KRTAP4-3
ABCD3
NUP133
ACTR8
SEL1L
MAP3K13
ATG14
RALGAPB
FER
PRELID3B
DEDD
NOL8
CENPP
UBE2N
DDX60
PELI2
DSCC1
WBP1L
TUT7
PTPRK
EHBP1
ZNF583
YTHDC2
MSANTD4
SCO1
ADPRM
ZNF326
ZNF337
RFESD
FBXO4
TBCA
ZNF557
ARHGAP24
RIC8B
CCDC50
FBXO34
FAM122A
EIF5A2
LSM6
MOCS2
UTS2B
STIMATE-MUSTN1
STIMATE
CFAP299
SYS1
OXNAD1
DPH3
CD55
KIAA1586
CXCL3
DNAJC9
MTCH1
ETAA1
SECISBP2L
KRCC1
FAM135A
ARG2
DAAM2
ANKRD20A1
ZBTB40
ZSCAN16
TCAIM
LRRC37A3
L3HYPDH
JKAMP
CNTRL
ZNF438
PAQR3
EDEM2
ZC3H12C
CARMIL1
ADRB2
C5
TRIM68
BANK1
WIPI1
C1orf53
MPHOSPH6
ZNF397
SLC25A3
FAM76B
CEP57
PDXDC1
ADGRB3
SCAND1
RBM19
SPATA4
UTP15
ANKRA2
C4orf3
LSM4
RGS2
ERO1A
RBM12
CPNE1
NIPSNAP3A
GABRB3
HSD17B7
FOXP1
SMC3
NUF2
APC
CCDC66
ECT2
SLC25A32
DCAF13
GCH1
PRICKLE2
NAALAD2
IMMP1L
ELP4
PTGS2
TCTE3
ERMARD
CFAP58
PRPF38B
NET1
SNAPC1
ZSCAN31
WDPCP
MDH1
TDG
FDXACB1
C11orf1
MTHFD2L
RGL1
GNPTAB
EEF1E1
NT5E
CA2
AKIRIN1
APPL2
GSTA4
MANBAL
SMG5
C5orf51
TTC12
ANKRD36C
FANCE
GRPEL2
TOMM20L
POLE4
NDFIP1
SPTLC2
SUMF2
ARIH1
VEZT
FGD6
NTPCR
SELENOK
WDR77
ATP5PB
CETN3
IL6ST
RNF8
CPOX
CCDC6
SLC3A2
SECISBP2
DENR
USP6NL
IFT57
BBS10
DTNB
CLGN
ERO1B
BRAP
ACAD10
NELFCD
TBC1D19
MAP9
ACTA2
XRCC4
TMEM167A
MCM3
TIMM23
TEX10
RALGAPA2
SLC35B3
ISOC1
MAL2
LONRF2
ZNF333
UROS
BCCIP
MED13L
CDC5L
SYNE2
OXR1
FAM204A
CEP120
SH3RF2
SAV1
MND1
EREG
ACAT1
LIMA1
PTP4A1
H2AC15
H2BC15
FANK1
MFAP3
FAM114A2
ZNF25
RAD54B
TNFRSF21
ARHGAP19
CSDE1
CSRP2
CLIP4
CREBZF
CEP295
KCTD20
FAM8A1
SLC17A5
MSRB2
FDX1
NEDD1
PXT1
MYLIP
ZFPM2
CXCL1
PDRG1
EFCAB13
TFIP11
KDM3A
RBBP9
ACOX3
HMGCS1
CLTC
ZNF215
CUL5
TMED7-TICAM2
TMED7
ANKRD46
MAPKAP1
METTL15
KIF18A
PIGF
CRIPT
STAC
PRKD3
TTI1
RPRD1B
ZNF302
CHD6
RFX1
MED17
LUZP1
SDE2
GNPNAT1
EXT1
KIF3B
AARD
RAB33B
EIF3C
H2BC4
H2AC6
CFL2
ZNF772
SAMD13
RASGRF2
C12orf66
EIF3CL
CDC7
C6orf226
ARL4A
MAD2L1
RABEP1
CPE
BIRC2
UGGT2
RTCA
SMIM12
TNC
DERA
PACRGL
NME7
BLZF1
NUDT4B
SERINC3
HELB
SEMA3C
RPP30
GMFB
CCDC39
TTC29
RPF1
HYDIN
TBC1D7-LOC100130357
TBC1D7
RABGGTB
MAML2
CCNH
LPCAT3
C5orf63
CHIC2
ATOH7
SPATA17
GPATCH2
MTPN
LUZP6
MTX2
PTMA
AUH
TNPO1
CLASP2
RPL5
ZBTB17
ZNFX1
PCNX4
TMEM242
OTUD7B
MRPL33
ANXA4
AAK1
CDK17
NME6
ATP6V1C1
CRYBG3
CIBAR1
ISCA1
STK38
HSP90AB1
CTR9
NOTCH2
ARL6
CLDND1
PIGM
FBXO43
TAF9
RAD17
AK6
MALT1
RAB32
CR1L
H3C1
CDC42BPA
HEATR5A
SUCLG1
NOTCH2NLB
UBE3B
C4orf19
UQCRFS1
H4C1
ARMC4
TMEM17
RIPK2
TANC2
ATP6V0A1
TAP1
PSMB9
ZNF543
RNF19A
DNAJC25-GNG10
DNAJC25
VPS8
PPIP5K2
GIN1
MYEF2
CTXN2
MED20
BYSL
PTTG1
ANAPC10
ABCE1
ARFGEF2
RBMXL1
KYAT3
MOV10
UBA6
SLC35D1
RAB23
ENDOD1
PPFIA2
CTNNBL1
PRICKLE4
FRS3
TUT4
TMEM38B
RNF217
GXYLT2
FRMD6
VAMP4
MRPL17
ILVBL
GLTP
CHST10
NT5DC3
CCDC112
ERGIC3
PRR16
CHD1
SF1
FAM13C
SUCO
TRPC4AP
WDR27
CPD
C6orf120
PRPF39
EIF2AK2
COG6
ATRN
TGDS
MRFAP1
PDP1
LYSMD3
GOLIM4
ZNF124
TTC13
ATL1
CYRIB
ALS2
NCOA5
RFX3
BIRC3
MTRF1L
SHOC2
VSNL1
SGPL1
BBIP1
MAP4K5
DERL1
VPS37C
ABCF1
DYNLRB1
STK17B
LPAR1
TMEM229B
PLEKHH1
NCOA3
NAXE
KNTC1
RPUSD4
FAM118B
DYNLL1
EXPH5
KAT7
FANCF
CACHD1
MSMO1
RNF182
TMEM170B
RDH14
CUL7
TTC17
SMPDL3A
STAMBPL1
MCOLN3
ANKRD42
NHLRC1
C12orf45
KDM3B
SLC25A51
GRIA4
TNFAIP8
SFXN1
TMEM123
NSRP1
LOC389831
PPP1CC
BTF3L4
RPIA
UNC13B
CHMP4C
CDC73
ETS1
GBE1
HARBI1
ATG13
MRS2
RBM17
PSTK
LGALS3
ATXN1
ANKRD31
F13A1
DELE1
STX12
ELMOD2
CENPE
C12orf29
FERMT2
VAMP3
CEP135
OGFRL1
ZNF596
UQCC2
NFYB
ACSS3
YAP1
SEC24D
PAPSS1
SMAD5
NAA20
SLC8B1
EXOC5
AP5M1
CCDC130
PHF3
PRDM2
YTHDC1
XRN2
GTF2IRD2B
NUCKS1
SACM1L
SRSF11
ATP6V1G1
H3C3
SNX19
EXOC2
ENTPD7
CCN3
SUCLG2
HMGCLL1
PAWR
TRIM32
ASTN2
AGL
TXNIP
ZNF266
ZNF445
SHQ1
AKT3
TSHR
TRDMT1
PPME1
C2CD3
MEF2C
MRPS30
INTS12
GSTCD
ACYP2
PRDM1
CRB1
GDAP1
TTC14
LOC100996750
KRTAP4-7
ARHGAP5
RNF13
USP38
SNRPF
POFUT1
PLAGL2
HSPA5
ZNF32
FBXW2
GMDS
FANCL
MMUT
CENPQ
MPZL3
CYB5R4
LYRM4
FARS2
KIF5B
NDUFAF2
ERCC8
SPIN4
ZSCAN26
ASCC3
RAD18
MAK
THUMPD2
NPFFR2
CFAP70
C14orf28
STAM2
C7orf25
COL8A1
PPIC
ISCU
RASSF6
LRRK2
PPP1CB
MICU2
HECTD1
ROCK2
LSM11
VWDE
PLCXD3
AGBL4
MTRNR2L8
CCDC88A
ARF4
NUDCD1
PEX3
ADAT2
BOD1
PIH1D2
NKAPD1
EXOC6B
SEC31A
TRIQK
TRPS1
CSNK1G3
RORB
H2BC17
H2AC17
ZCCHC4
SVBP
ERMAP
CTSC
TM9SF3
TET2
IKBIP
APAF1
AK2
FAM149A
BMT2
DNMBP
CGGBP1
BRINP3
FAM83B
DNAH14
EIF2B2
EIF2D
ZBTB12
ZNF700
RNF180
TDP1
CMTM6
ZFYVE9
UHMK1
RAB11FIP2
ZNF654
WWP1
PHF20
TAF11
DEPTOR
OR2L13
PTPN2
USP2
CLK4
ZNF391
RWDD1
KRBA2
ZNF706
RAB38
H2AC11
DDX46
SESN1
CEP57L1
GAGE2C
GAGE2B
GAGE2A
LAMTOR3
TFAM
MIPOL1
LRRFIP2
DHRS4
KTN1
ANKEF1
ZDHHC13
RIOX2
GPCPD1
TMEM19
NKIRAS1
HNRNPUL1
RPL15
DUSP6
RERE
COPS3
PPP1R11
CNIH1
DDX1
H2BC11
CRY2
CCDC38
AMDHD1
IKZF3
NDUFV2
NEK7
ZKSCAN4
GABRB1
HIF1A
SPCS3
DTWD2
SERPINB1
ILKAP
PCED1B
AMIGO2
ARHGEF37
LDAH
WLS
SYNRG
NUDCD2
HMMR
CILK1
CHML
MYL12B
OPN3
PKN2
HECTD2
FBXO48
APLF
C18orf21
RIOK3
PRDM4
ZNF704
DENND1B
PAQR8
TRIM39
SPANXB1
SSX2IP
MRPS5
TIFA
FANCD2
BTBD3
NEMF
ACIN1
DNA2
C14orf119
RNF38
ZNF521
SLC9B1
MTERF2
POLR3B
ZNF432
ZNF346
ATP1B1
FNIP1
SCARB1
ZSWIM7
YWHAB
TTC19
USP45
THBS4
MTX3
ROBO2
IER5
MTCP1
CMC4
BRCC3
TMEM251
MOAP1
SRSF9
ZNF343
C20orf96
HSP90B1
TMX4
SIK2
PANX1
DEK
LRP12
SLC36A1
RNF20
ZNF136
TAP2
TSG101
GCFC2
CCDC150
OTUD1
MCUR1
MLLT10
XKR9
SREK1
LACTB2
RNF144B
ZFAND4
ARSJ
INPP4A
ETV7
IFI27L1
DDX24
ZFP69
CHPT1
THOC1
ZNF468
PLCL2
GTF2E2
ELOF1
OSBP
CAV2
TBC1D23
DCAF10
FNTB
TTLL5
ERG28
PRKN
PACRG
ATR
PTPN13
STXBP3
SENP6
ANGEL1
SGO1
XPO5
POLH
ADD1
RUFY2
ELOVL7
CCDC92
PALM2AKAP2
ZNF202
NEDD9
ZNF335
XPC
LSM3
SPATA7
SP2