ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277131 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◣ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
NDUFB5
MRPL47
FAM227A
CBY1
DNMBP
FUZ
NOTCH1
OR13C2
IFRD1
ARIH1
ZSCAN2
IQCH
AAGAB
TNRC18
PXMP4
ARID2
HMGB1
ISL2
CAPRIN1
CYTH2
SNAPC3
MTF2
PHF5A
ACO2
HDAC9
GRK6
PDIA4
DDX17
CFL1
SLC16A13
ZNF775
RTBDN
CSRNP2
OAZ2
PTMA
YEATS2
TES
CELF3
UFD1
CDC45
UBTD2
KLHL24
SH3GL3
MSANTD4
SLC25A36
POLB
MCCC1
KRT8
ANXA11
TCIM
ESRRA
ST6GAL1
SOX6
ATAT1
C11orf58
NUP160
ANKRD65
TBC1D17
AKT1S1
TGIF1
OGA
BORCS6
FMNL3
CEP41
RSF1
AAMDC
FBXL19
DDX3X
TESK2
YES1
CHD6
ZFC3H1
THAP2
CEP63
ANAPC13
ITGB1
CCDC116
ERV3-1-ZNF117
ERV3-1
DST
TSNAXIP1
RANBP10
KDM2A
DISP3
PIF1
PIK3CA
ELOVL5
CCT2
RBBP9
KMT2B
ZBTB6
SAPCD2
SPRY4
C3orf20
FOXO6
SAXO1
RRAGA
NKIRAS1
SYNCRIP
YWHAG
RNF44
PMEPA1
PIK3R3
DHX8
HMGN1
EP300
HES5
HSPA13
PIPOX
HSPH1
ETV1
TIAL1
ZNF92
GSN
POLR3E
SINHCAF
NCOA4
ACTB
SIX2
YLPM1
FZD2
MAML1
GET3
HGS
ARL16
GADD45A
EMSY
DKK3
TUBB
HACL1
BTD
MCTS1
ANAPC15
NDUFS5
WDR36
RAPGEF5
PRDM2
PGK1
GOLGB1
PTCD2
MRPS27
CBX1
RAB11B
PPP1R2
ZNF627
MARCKS
PLCH1
TINAGL1
FBRS
ALDH3A1
PIMREG
MEX3D
MRPS30
PDIK1L
CCDC88A
FRAT1
ZNF697
MIDN
KMT5A
TDGF1
KDM3A
FEM1A
NEBL
SLX4IP
F11R
STK32C
LRRC27
TRAK2
STRADB
ZNF524
FIZ1
ZNF195
DAGLB
SDHD
CNPY2
MMACHC
CCDC163
FZD1
RABL3
GTF2E1
GPR158
NASP
LDB1
CBX2
ZFAND3
ZNF335
ADPGK
PELATON
UBQLN4
LAMTOR2
TLX3
HEXIM2
NSA2
GFM2
FXR1
GOLIM4
S100A4
RAB30
CDK5RAP2
ATP2C1
ZSCAN9
TRMT2A
RANBP1
ZDHHC5
PELI1
RTRAF
EIF4A2
MTRNR2L8
SHF
KIAA0895L
TCF12
ETV6
PPIA
WBP1L
ZNF304
SFPQ
SLC25A11
RNF167
TUT7
ADRM1
ZCCHC14
MLEC
CUEDC1
H3-3B
HLTF
OARD1
NFYA
RPL15
FAM76B
CEP57
TUBB4B
TUT1
ETFB
ZBED5
FTSJ1
ZCCHC12
POU2F1
ZNF250
DYNLT3
AGPAT1
RNF5
TMEM249
ABCG1
G3BP1
EXOC5
AP5M1
ID1
ZBTB26
PROSER1
NHLRC3
ICAM4
VASH2
DPP3
PER2
CREM
EOLA1
ADAR
ENOSF1
ASMTL
ZNF84
SRSF6
VEZT
FGD6
HCN4
WDFY2
CD2BP2
SLC2A4
OGDH
CCDC171
MXD1
DMRTA2
NATD1
PIN4
ZBTB40
VGF
MFN1
WDR74
DAAM1
CBR4
TLN2
H2AZ2
TOMM40
CDK16
NDE1
TTF1
H4C15
H4C14
HNRNPDL
ENOPH1
WBP11
C12orf60
NDUFB4
SC5D
C1orf158
WDPCP
MDH1
CDC37L1
ZSWIM4
HBP1
STAG3
GPC2
MTHFD1
OTUD5
RRBP1
GET4
ACTR1A
SRPRA
LPIN1
SSR4
IDH3G
PPME1
C2CD3
IREB2
CALR3
C19orf44
UCHL5
RO60
CBLB
EPHB3
IP6K2
SLC4A2
CDK5
NFATC3
PGM2L1
LZTS1
RFX1
UMAD1
NDUFS2
SLC35B4
PCM1
ACTR2
STK35
HNRNPUL1
EIF1AX
RPUSD4
FAM118B
ESRRG
DUSP4
HNRNPA0
SCAF4
REST
SACS
METTL11B
NRG1
SRRM4
OBI1
PRICKLE1
SNRPN
FLAD1
PLPP2
MED12
HESX1
VENTX
NADK
PSMD9
HPD
WFDC8
ZNF343
FGD4
CER1
GADD45G
IER5L
DNMT3B
CNPY1
LIN28B
NANOG
FBP1
PPP1R16B
ETV4
MTRNR2L2
ESRP1
RIF1
GIMAP5
KIFBP
TMCC1
FBXO40
ITPRIP
BFSP1
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
USP44
GPSM3
ZNF532
SPIC
FGFR2
PDCL
CDC14B
DHX32
DGLUCY
EEF1A1
SLC2A14
GDF3
RFX4
LRRTM4
SFRP2
TIMP4
ADA2
TJP2
CARHSP1
FOXP1
SASH1
AK4
CAMTA1
DUSP12
WDR49
PLEKHG1
AHCYL2
TNC
FAM120B
TBC1D16
NDST1
ACVR1
UGT1A6
C20orf96
MACROH2A1
WNT5B
ALDH7A1
ANK2
VANGL2
ST18
SLC7A5
AASDH
SGMS2
AUH
SRSF7
VOPP1
SLC33A1
PITPNM2
KCNN2
OSBPL1A
DPPA4
SLFN12
CCDC92
CCN2
DICER1
KLF7
PRRC2B
NRCAM
GCNT2
TMUB2
CDH10
CFLAR
CFAP20
EPB41L1
ZNF428
BRINP2
PALM2AKAP2
KRTAP3-1
STMN1
ADAMTS16
KLF5
DACT3
F11
CELSR3
CNGA1
CTNND2
RGS3
KCNIP4
TACC2
ACSL1
RASAL2
LINGO1
ZBTB45
ZNF202
KNTC1
ERMN
MBOAT2
HOXB1
CP
SLCO5A1
C22orf39
SMAD3
TRDMT1
CD200
LLGL1
CHN2
GEMIN7
LIN28A
EMC9
DCLK1
ARHGAP42
WASF1
CDC40
CEP170
PPP1R18
SDCCAG8
FAM153B
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
TCHP
ARID5A
CNR2
CAAP1
CTTNBP2NL
JUP
SP5
SNX16
RAD54B
PLAGL1
ZFYVE1
SET
FAM181A
MEF2C
LIMCH1
IFIT3
DHRS3
LYPD1
ERGIC2
SPATA12
EGR3
CLCF1
CCDC167
TMEFF1
PES1
PCYT1B
THEM4
PWWP2A
AKIRIN1
IL17RD
ACCS
RNF19A
TRPM3
PCDHB8
E2F7
POLDIP3
MDK
ZBTB8OS
RBBP4
C1R
FSBP
CNP
C1orf127
ZNF318
JAG1
IL23A
TIA1
SMIM14
ZNF37A
MOSPD3
MANSC1
TCN2
IPO11
DTNA
ARF4
RPL27
FAT1
ABCB8
GXYLT2
CNN3
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
JPT1
SLC2A11
PDP1
SPAG9
ZNF469
RGPD2
RGPD1
PCDHB5
SPAG4
PDE4D
STOX2
SYTL2
AKAP9
LCOR
RNF43
ADNP
ESR1
TCF4
GDF5
CEP250
NFE2
BBS7
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
CDK5R1
FILIP1L
ABAT
LPP
GALNT8
CLEC9A
ZNF763
AMOTL2
GFRA1
ZNF106
HIP1R
TNFRSF21
PSME3IP1
INKA2
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
SIRT4
TMPRSS7
SPHK1
MMP10
RSPH14
RSPRY1
DLX5
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
RASSF8
SYBU
ZNF649
ZCCHC8
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
MAP2K5
MAP3K9
PCDHGC4
INSM1
PBLD
HNRNPH3
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
ZNF506
TLE3
DPPA2
PRR5L
DNM1L
PROM1
DDX5
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
CCNG2
SNX27
RBMX
PAG1
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
IFTAP
MS4A12
HEXIM1
LTBP1
COPS7A
RAP1A
TBC1D31
USP53
TSPAN19
LRRIQ1
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
CHMP7
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
HOXA9
KMT5C
SMARCA2
ZSCAN31
PHLDB2
ARHGAP24
HNRNPC
ADGRA1
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
MED19
TRIB1
UBR2
HES6
IPO4
SERPINB6
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
MAD2L1BP
GTPBP2
TMEM132A
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
PBX1
CRISPLD1
XAB2
CITED2
SMC4
IFT80
DPP4
KANSL1L
TSPAN13
GID4
ATPAF2
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
NR2F1
ANKRD6
EXOSC2
FAM102A
CLIP1
LIFR
SLC35G4
TCF7L2
IGF1
FGF19
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
IGSF9
RND1
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
SLC4A7
UBE2T
SUFU
PTPRD
TOMM40L
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
RBM47
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
FRRS1L
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
HLCS
RIPOR3
MYO1B
TTI2
TMEM220
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
UFSP2
INTS12
GSTCD
NUBP1
ING4
ZNF286A
WLS
GNA12
DAOA
CHD7
SLC25A25
CABYR
SLC7A11
ARHGAP18
RRAGD
GREB1
LTBR
MCM10
BEST3
TAGLN3
PTPRK
NSMCE4A
CCDC124
TRIM38
ODF2
AP3M2
ZFAND6
NRL
DCAF11
PBDC1
MFSD6
ACYP2
NIN
GJA1
NSUN6
ARL5B
PRCC
CNIH4
RAD23B
GPR137
EMID1