ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

CYP4F11
SCML1
FAH
MTF2
SNX16
ATXN2L
SACS
GADD45G
CAMTA1
HMGB1
PPP1R15B
NRARP
SPIN1
HDAC9
STK32C
LRRC27
CAPRIN1
CSRNP2
ARID2
PDE4B
BZW2
ANKMY2
FABP7
HES5
SLC6A9
ITPK1
HNRNPDL
ENOPH1
KLF7
HMGN1
CCNG2
KRTAP4-12
CITED2
ARIH1
LOC100996750
KRTAP4-7
KDELR1
RGR
ALDH7A1
ACSL1
OAZ2
FAM181A
ZNF775
TSPAN13
RTN4
KRTAP4-11
KRTAP4-4
CDC34
RUBCNL
DNMBP
DDX17
IQCH
AAGAB
ITPRIP
HBP1
MTDH
CTAGE8
CTAGE4
OR8U8
OR8U1
LPP
PCBP4
AGO1
GADD45A
NDRG2
ZNF277
DOCK4
VANGL2
CDK5R1
FMNL3
CTAGE15
APC2
TUBA1C
NEU4
ATAT1
ZNF717
POTEH
KRTAP1-1
ADRM1
PTPRK
PNRC2
RHOJ
STX6
SIPA1L1
CDC27
PAQR6
FRG1
KRTAP2-4
KRTAP4-5
TRIB1
HES6
KRTAP4-6
ZNF358
TEAD2
KRTAP2-1
NDUFB5
MRPL47
KDM2A
RGS3
ADNP
STAU2
NCOA4
NFIB
TMPRSS5
C16orf46
LRIG1
MARCKS
KIF21A
PTMA
FUZ
UBTD2
KCNQ3
LRRN1
PIPOX
WDR74
ESRRA
ZSWIM4
ANKRD18B
NUDT19
OR2A7
KRTAP4-8
TNRC18
RIPOR3
KRTAP2-2
PTGS1
TMEM114
KRTAP2-3
OTOP1
FAM227A
CBY1
VOPP1
CCDC88A
ITGB8
EIF4A2
PHYHIPL
NREP
EHF
STAG3
GPC2
AMMECR1L
TRMT2A
RANBP1
MAP7D1
ZBTB25
ZBTB1
CTAGE9
TAS2R41
TMEM132A
KRTAP4-9
CCSER1
PLCG1
CD24
MTRNR2L2
SNAPC3
HSPH1
TRDMT1
LIMCH1
DDX5
POU2F1
TCF7L2
PLEKHG2
SRSF6
CLEC18B
MAP2K4
C21orf91
SHF
RNF44
LZTS1
GPAT4
PFKFB3
ATXN7L2
MIDN
CLEC18A
FRAT1
DYRK1B
UQCRC1
CNN3
ZNF763
CTAGE6
PLXNB1
KRTAP9-6
IRAG1
CDK2AP1
TJAP1
MEGF9
TEPP
OR56A1
SOX6
CHD6
ZNF195
SRSF7
ABAT
LTBP1
CREBZF
UBE2E3
ARNT2
KRTAP9-8
SHTN1
CASTOR2
NELFCD
ACSS1
POLR3E
FAM102A
ZSCAN2
KRTAP1-3
OR4F4
ZFC3H1
THAP2
ACVR1
PDIA4
OSBPL1A
ZSCAN9
POLB
PDP1
TCF4
PYDC5
IFI16
ST7
RBPJ
ADO
ZNF606
FSCN1
KAT6A
TNFRSF11B
COLEC10
SFXN5
USP22
PIMREG
EEF2K
LOC647264
POLDIP3
TUBB
TMEFF1
ARF4
SENP8
MYO9A
RSF1
AAMDC
TMPRSS7
ANKRD6
PTPRD
LMO4
NSUN6
ARL5B
SPATA13
LMO2
SLC16A9
KRTAP1-5
COX20
SCD
DST
FILIP1L
ZNF250
NR2F1
MAPK10
SYNRG
ANP32E
REST
METTL11B
NRG1
SRRM4
OBI1
PRICKLE1
SNRPN
GRK6
FLAD1
NOTCH1
PLPP2
IFRD1
GSN
MED12
HESX1
ETV1
TDGF1
VENTX
PMEPA1
NADK
PSMD9
HPD
WFDC8
ZNF343
CELF3
FGD4
CER1
PHF5A
ACO2
IER5L
DNMT3B
DAGLB
CNPY1
MTRNR2L8
LIN28B
NANOG
KMT2B
FBP1
PPP1R16B
ETV4
CYTH2
ESRP1
FBXL19
RIF1
GIMAP5
KIFBP
TMCC1
FBXO40
FZD2
HGS
ARL16
BFSP1
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
CCT2
USP44
GPSM3
CEP41
NDUFS5
ZNF532
SPIC
WBP1L
FGFR2
PDCL
CDC14B
DHX32
DGLUCY
MCCC1
EEF1A1
SLC2A14
GDF3
RFX4
LRRTM4
SFRP2
WDFY2
TIMP4
TES
ADA2
TJP2
DDX3X
NEBL
CARHSP1
FOXP1
ZNF304
GET3
SASH1
PGK1
AK4
SPRY4
SINHCAF
DUSP12
WDR49
PLEKHG1
AHCYL2
H3-3B
TNC
TOMM40
FAM120B
TBC1D16
NDST1
UGT1A6
C20orf96
UFD1
CDC45
MACROH2A1
WNT5B
RTBDN
ANK2
SIX2
ST18
PXMP4
SLC7A5
KDM3A
AASDH
SGMS2
AUH
SLC33A1
PITPNM2
KCNN2
SLC25A36
DPPA4
SLFN12
CCDC92
CCN2
MSANTD4
DICER1
FOXO6
CFL1
PRRC2B
NUP160
NRCAM
DISP3
WDR36
SLC16A13
TESK2
GCNT2
TMUB2
CDH10
VASH2
CFLAR
CFAP20
EPB41L1
ZNF428
PIK3R3
OGA
BRINP2
PALM2AKAP2
KRTAP3-1
ETV6
STMN1
ADAMTS16
KLF5
DACT3
UBQLN4
F11
CELSR3
SYNCRIP
CNGA1
CTNND2
DHX8
DPP3
KCNIP4
TACC2
LAMTOR2
RASAL2
CD2BP2
LINGO1
ANAPC15
ZBTB45
PIN4
ZNF202
KNTC1
ERMN
MBOAT2
HOXB1
SH3GL3
CP
TIAL1
SLCO5A1
PLCH1
ISL2
PIF1
C22orf39
SMAD3
VEZT
FGD6
CD200
LLGL1
CHN2
GEMIN7
LIN28A
EMC9
TUT1
SLC25A11
RNF167
DCLK1
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
PPP1R18
KLHL24
SDCCAG8
FAM153B
G3BP1
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
CNR2
CAAP1
ST6GAL1
CTTNBP2NL
F11R
JUP
ZFAND3
SFPQ
SP5
CEP63
ANAPC13
RAD54B
PLAGL1
ZFYVE1
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
SET
MEF2C
ETFB
ITGB1
ZDHHC5
KRT8
IFIT3
ZBTB40
DHRS3
LYPD1
ERGIC2
YEATS2
SPATA12
EGR3
CLCF1
EP300
CCDC167
PES1
PCYT1B
KIAA0895L
HEXIM2
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
IL17RD
ACCS
RNF19A
TRPM3
PCDHB8
E2F7
MDK
ZBTB8OS
RBBP4
C1R
FSBP
CNP
NSA2
GFM2
C1orf127
ZNF318
ADAR
TSNAXIP1
RANBP10
JAG1
HLTF
IL23A
TIA1
SMIM14
ZNF37A
MOSPD3
HSPA13
ZBTB6
MANSC1
TCN2
IPO11
DTNA
NKIRAS1
RPL27
FAT1
ABCB8
GXYLT2
ZCCHC12
GSPT2
SYNPO2
LPCAT4
TRIM22
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
ACTR1A
JPT1
SLC2A11
SPAG9
ZNF469
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
PCDHB5
SPAG4
PDE4D
STOX2
SYTL2
AKAP9
LCOR
RNF43
EXOC5
AP5M1
PELI1
ESR1
GDF5
CEP250
NFE2
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
IP6K2
GALNT8
CLEC9A
HACL1
BTD
RRBP1
AMOTL2
GFRA1
ZNF106
HIP1R
VGF
TNFRSF21
PSME3IP1
INKA2
ID1
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
SIRT4
SPHK1
MMP10
RSPH14
RSPRY1
DLX5
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
ASMTL
RASSF8
SYBU
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
NASP
MAP2K5
C11orf58
MAP3K9
PCDHGC4
INSM1
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
EGFR
KLHL5
KLF17
IREB2
ELOVL5
ZNF506
TLE3
DPPA2
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
PROM1
TUT7
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
ZBTB26
SNX27
RBMX
PAG1
HNRNPUL1
YWHAG
G3BP2
CCDC146
TTF2
FAM220A
LOC389199
RPL15
IFTAP
MS4A12
HEXIM1
COPS7A
RAP1A
TBC1D31
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
RBBP9
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
RTRAF
MED19
UBR2
IPO4
SERPINB6
OR13C2
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
IGFBP2
YIPF3
POLR1C
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
ZBED5
SMC4
IFT80
DPP4
KANSL1L
GID4
ATPAF2
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
ANKRD65
SLC4A2
CDK5
MCTS1
EXOSC2
CLIP1
LIFR
SLC35G4
IGF1
FGF19
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PTPRZ1
CHMP4B
CCDC171
TBC1D9
NEMF
LYSMD3
USP54
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
ACTR2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
SLC4A7
UBE2T
SUFU
MTHFD1
TOMM40L
TGIF1
ERICH6B
SMC3
METTL9
WDR33
DSE
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
RBM47
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
FRRS1L
PIK3CA
NDE1
NFASC
CX3CL1
ZNF737
FEZ2
ANK3
HLCS
MYO1B
TTI2
TMEM220
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
UFSP2