ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771664 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◣ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRG1
REST
SOX6
ETV1
METTL11B
FGD4
GDF3
ZNF343
DNMT3B
HESX1
FGFR2
WFDC8
SNRPN
FLAD1
TIMP4
VENTX
AK4
TDGF1
FBP1
LIN28B
FZD2
PIPOX
PPP1R16B
PRICKLE1
CDC14B
MED12
PDCL
GEMIN7
CNGA1
CNR2
UGT1A6
SLFN12
OBI1
KLF17
ACCS
PITPNM2
DNMBP
SACS
PSMD9
HPD
DPPA4
C22orf39
RIF1
USP44
TBC1D16
MBOAT2
CER1
CCDC169-SOHLH2
CCDC169
DHX32
ST18
PRRC2B
NADK
METTL7A
SLC10A2
NDST1
PCDHGC4
PDPN
PCDHB8
PLEKHA5
OVCH1
CAAP1
GSN
LIN28A
VAPB
PWWP3A
ADAMTS16
WDR49
CFLAR
SYNPO2
FBXO40
CCL2
IER5L
KCNIP4
KIAA1522
ACSBG2
ANK2
GADD45G
DCLK1
TCHP
HDAC9
EPB41L1
ETV4
F11
RIMBP2
PMEPA1
TRPM3
PPP1R18
ZNF318
PBDC1
SPIC
RFX4
GSPT2
SASH1
TTC39B
AUH
KLHL4
CCN2
GALNT8
TMEM220
ESRP1
RGSL1
KLHL5
ZNF532
HOXB1
CNPY1
PCDHB5
SPAG9
EFCAB8
KRT8
SLC2A11
TMCC1
LIFR
ZNF202
SMAD3
JAG1
MRGPRX3
OLIG3
HLCS
LRRTM4
DDX31
CCDC92
IFIT3
LRRTM3
RAP1A
ZFYVE1
SOX15
CDH6
ADA2
LYPD1
SLC35G3
AHCYL2
MACROH2A1
CCDC167
SERPINB6
MYOM1
LPCAT4
CCDC172
BEST3
TACC2
SUCLA2
RND1
ITPRIP
PXMP4
SOX5
PCDHB13
KRTAP3-1
MTF2
CLEC9A
ADGRA1
NLGN1
RNF213
SCNN1A
LTBR
GCNT2
KMT2B
ZSCAN12
FOXP1
ERICH3
SGMS2
MAP2K5
NEBL
DACH2
FAM153B
GRAMD2B
HMGB1
TINAGL1
KCNMB2
SLCO4C1
MAN2C1
GRM4
SFT2D3
TRIM22
SPATC1L
SLC35G4
DUSP12
ACSL1
PLAC8
EIF4B
C16orf78
ODF2
IL1RAPL1
SLCO5A1
ZNF469
IFRD1
IL23A
RNF43
RHCE
CNBP
TRIM54
DERA
ERMN
ABCF3
C1R
CPN2
USP48
SKA2
PRR11
DCLRE1C
ARID5A
RASSF8
CPNE2
RIPOR3
UBE2C
AKIRIN1
DAGLB
FGF1
GOT1L1
SLC16A8
KMT5C
ANKDD1B
SRRM4
KLF5
RNASEL
RGS3
ZNF649
PBX1
SPATA12
MS4A12
DPPA2
KDELR2
HLTF
TEPSIN
NDUFAF8
KLF7
DHRS3
PACSIN2
VOPP1
LOC105372977
LEMD2
THEM4
TSGA10IP
ZNF747
GRK6
SLC2A14
PLAGL1
FAM162B
SRC
ABCB8
ADGRL2
RIMKLB
PLPP2
PCYT1B
RRBP1
MMP10
WNT5B
RBMX
ARSD
YWHAQ
EGFR
LLGL1
CCDC171
WBP1L
ZBTB45
CORO6
PTMA
ATOH1
IL20
RAB34
PLEKHG2
CTIF
MANSC1
NDUFS7
DPP4
CYTH2
CDH10
RNF19A
NSMCE4A
RAD23B
PCDH18
BABAM1
DGLUCY
NODAL
FMN1
SORBS2
TUBB
RAD54B
FSBP
NFE2
CLCN5
GRHL2
RBM47
CEP164
GET3
TESK2
EIF1AX
CTNND2
STOX2
DOLPP1
TMEM114
HSH2D
G3BP1
CD300LB
SET
EIF4G1
SERPINF1
NTNG1
ETV6
MAT2B
TAL1
ALDH7A1
ISL2
GJA1
RPS24
ZNF77
SFRP2
WBP1
SHF
AHCYL1
FUT10
CABLES2
BCAT1
DACT3
TNC
KHSRP
RBPJ
C22orf31
TNRC18
CELSR3
STMN1
PWWP2A
EIF4E3
TOM1L2
DRC3
RAC1
CNOT3
S100A2
SMARCC2
VCP
NICN1
RBP1
CDHR3
DNM2
CDKL5
API5
ZSWIM4
SP2
PAIP2B
NRARP
FAM227A
CBY1
NDUFB5
MRPL47
FUZ
NOTCH1
DDX17
CELF3
ZSCAN2
ARID2
PHF5A
ACO2
MTRNR2L8
NANOG
MTRNR2L2
IQCH
AAGAB
FBXL19
GIMAP5
KIFBP
HGS
ARL16
BFSP1
ZFC3H1
THAP2
CCT2
GPSM3
CEP41
NDUFS5
CAPRIN1
ZNF775
MCCC1
EEF1A1
ARIH1
WDFY2
TES
KDM2A
TJP2
DDX3X
CARHSP1
ZNF304
DST
PGK1
SPRY4
CAMTA1
SINHCAF
SNAPC3
PLEKHG1
H3-3B
TOMM40
FAM120B
ACVR1
C20orf96
UFD1
CDC45
RTBDN
PDIA4
CHD6
VANGL2
SIX2
SLC7A5
KDM3A
ZNF195
AASDH
SRSF7
SLC33A1
KCNN2
OSBPL1A
SLC25A36
MSANTD4
DICER1
FOXO6
MARCKS
CFL1
NUP160
NRCAM
DISP3
WDR36
ZSCAN9
SLC16A13
TMUB2
VASH2
WDR74
CFAP20
ZNF428
PIK3R3
OGA
BRINP2
PALM2AKAP2
TRMT2A
RANBP1
UBQLN4
HSPH1
POLB
SYNCRIP
DHX8
DPP3
LAMTOR2
RASAL2
CD2BP2
LINGO1
HES5
HMGN1
ANAPC15
CSRNP2
PIN4
KNTC1
SH3GL3
ESRRA
GADD45A
CP
TIAL1
PLCH1
PIF1
VEZT
FGD6
TRDMT1
CD200
CHN2
EMC9
TUT1
OAZ2
SLC25A11
RNF167
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
KLHL24
SDCCAG8
ZNF140
NEDD9
RAB30
EMSY
ST6GAL1
CTTNBP2NL
F11R
JUP
ZFAND3
SFPQ
SP5
SNX16
CEP63
ANAPC13
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
FAM181A
MEF2C
LIMCH1
ETFB
ITGB1
ZDHHC5
STK32C
LRRC27
ZBTB40
ERGIC2
YEATS2
EGR3
CLCF1
EP300
TMEFF1
PES1
KIAA0895L
HEXIM2
SAXO1
RRAGA
ADRM1
IL17RD
ATAT1
E2F7
POLDIP3
MDK
ZBTB8OS
RBBP4
HNRNPDL
CNP
NSA2
GFM2
C1orf127
CCDC88A
ADAR
TSNAXIP1
RANBP10
ENOPH1
TIA1
SMIM14
ZNF37A
MOSPD3
HSPA13
ZBTB6
TCN2
IPO11
HBP1
DTNA
NKIRAS1
ARF4
RPL27
FAT1
GXYLT2
CNN3
ZCCHC12
SENP8
MYO9A
ZNF358
PSMB7
RBBP6
CNKSR3
AFF1
ACTR1A
JPT1
PDP1
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
SPAG4
PDE4D
SYTL2
AKAP9
PIMREG
LCOR
EXOC5
AP5M1
PELI1
ADNP
ESR1
TCF4
GDF5
CEP250
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
UQCRQ
GDF9
SPHK2
IP6K2
CDK5R1
FILIP1L
ABAT
LPP
HACL1
BTD
ZNF763
AMOTL2
GFRA1
ZNF106
HIP1R
RSF1
AAMDC
VGF
TNFRSF21
PSME3IP1
INKA2
ID1
CDK12
DLG2
PKNOX2
POLR3E
SIRT4
TMPRSS7
SPHK1
RSPH14
RSPRY1
DLX5
ERBB2
CALD1
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
ASMTL
SYBU
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
ZNF608
SMARCB1
NASP
C11orf58
MAP3K9
INSM1
PBLD
HNRNPH3
RCOR1
RFFL
PAIP2
BLOC1S4
ARHGEF37
PTGS1
PYDC5
IFI16
IREB2
ELOVL5
ZNF506
TLE3
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
PROM1
TUT7
DDX5
ATAD2
INTS9
HMBOX1
AFAP1
C6orf132
ZBTB18
BCL9
CCNG2
ZBTB26
SNX27
PAG1
HNRNPUL1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
RPL15
IFTAP
HEXIM1
LTBP1
COPS7A
MIDN
TBC1D31
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
PNRC1
CHD8
CTH
SPRING1
RNFT2
RBBP9
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
SMARCA2
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
UBTD2
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
PTX3
TMX2
RTRAF
MED19
TRIB1
UBR2
HES6
IPO4
OR13C2
GBA
TBC1D10B
NARF
MYLPF
PEX11G
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
TMEM132A
IGFBP2
YIPF3
POLR1C
CYP4F11
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
GAS2L3
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
CRISPLD1
XAB2
CITED2
ZBED5
SMC4
IFT80
KANSL1L
TSPAN13
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
TCF20
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
ANKRD65
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
TCF7L2
IGF1
FGF19
APH1A
ZNF273
PPP1R15A
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
SRPRA
HNRNPL
FOXN3
PTPRZ1
CHMP4B
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
ZNF593
C1orf232
STAU2
ACTR2
BSDC1
ILF2
ZNF292
GGH
CBX1
PRDM14
BMPR2
ST7
ZBTB20
PRKRIP1
KMT5A
ZNF85
ABCB4
SPEM1
CLPB
ADD2
ZNF576
IRGQ
RAB5C
HIP1
DOCK9
NCOA4
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
ZSCAN18
WTAP
SOD2
SLC4A7
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
TGIF1
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
VMP1
PTRH2
CENPA
ZNF548
FRRS1L
PIK3CA
NDE1
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
MYO1B
TTI2
DDA1
MEA1
KLHDC3
UFSP2
INTS12
GSTCD
RAB11B
NUBP1
ING4
ZNF286A
WLS
GNA12
DAOA
CHD7
SLC25A25
CABYR
SLC7A11
ARHGAP18
RRAGD
GREB1
EIF4A2
MCM10
ANXA11
TAGLN3
PTPRK
MLEC
CCDC124
TRIM38
AP3M2
ZFAND6
NRL
DCAF11
MFSD6
ACYP2
NIN
ZNF92
NSUN6
ARL5B
PRCC
CNIH4
GPR137
EMID1
EVI5L
SYNGR4
GLI2
ARMC3
ZFHX2