ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407085 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◣ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NDUFB5
MRPL47
DNMBP
PHF5A
ACO2
FAM227A
CBY1
NRARP
HMGB1
PXMP4
FUZ
ZSCAN2
GRK6
CCT2
MCCC1
SLC25A36
DDX17
MTF2
NOTCH1
C3orf20
SPRY4
PTMA
OR13C2
SIX2
FBXL19
SPEF1
NDUFS5
PDIA4
CYTH2
TYMSOS
TYMS
ANKRD65
SLC16A13
PIK3R3
SINHCAF
DKK3
PIN4
FOXO6
ISL2
SAXO1
RRAGA
HGS
ARL16
UFD1
CDC45
TESK2
GOLGB1
TMUB2
ARID2
ZNF775
ALDH3A1
KLHL24
MFN1
IQCH
AAGAB
NEBL
PIK3CA
TDGF1
PPP1R15A
ARIH1
PIF1
ZFC3H1
THAP2
H4C15
H4C14
ZBTB6
KNTC1
METTL9
ST6GAL1
SH3GL3
IFRD1
TLX3
RRBP1
SNAPC3
ANKHD1-EIF4EBP3
ANKHD1
VASH2
ESRRG
WBP11
C12orf60
F11R
CNKSR3
ZNF304
TOMM40
SPAG4
YLPM1
KMT2B
PIPOX
PPME1
C2CD3
NKIRAS1
BLOC1S4
SRSF7
OGA
SDHD
FAM220A
PSMB7
PWWP2A
ADPGK
G3BP1
GADD45A
ETFB
PSMB6
MYOF
SENP2
SFPQ
H2AZ2
ELOVL5
CCL26
IFT27
DPP3
RASAL2
DDX5
ZCCHC12
ANXA11
CELSR3
ABCC5
TUBB
OAZ2
MCM7
AP4M1
OGT
RSF1
AAMDC
ZNF273
PSME3IP1
RSPRY1
TAX1BP3
EMC6
SLC25A11
RNF167
CEP63
ANAPC13
STK32C
LRRC27
YES1
ABCG1
WDR74
ZDHHC5
HACL1
BTD
KRT6A
PAX6
CHD6
ANAPC15
TIA1
EXOSC2
GET3
KMT5A
ZNF680
WDFY2
MSANTD4
SHF
RAPGEF5
ATP2C1
HDAC9
CSRNP2
ERGIC2
TOMM40L
LGALS8
NDST1
ASMTL
CDK12
ERV3-1-ZNF117
ERV3-1
RTN4
ZSCAN9
NME7
BLZF1
EMC9
PCNP
EP300
GDF5
CEP250
H3-3B
PIMREG
STAG3
GPC2
TBC1D31
BBS7
SPRING1
RNFT2
TNRC18
SLC33A1
OARD1
NFYA
CALR3
C19orf44
RAB30
FXR1
GTSE1
CAPRIN1
TCF4
PTCD2
MRPS27
UBQLN4
LAMTOR2
WASF1
CDC40
EMSY
NARF
RBMX
NONO
HES5
ZNF627
NDUFB4
DST
ANKRD54
CGB1
TUT1
CEP70
ETV5
SENP8
MYO9A
ARHGAP27
SIN3A
SLC35E2A
NUP160
ATAT1
PBLD
HNRNPH3
UMAD1
ZCCHC8
TBC1D17
AKT1S1
SAPCD2
HEBP2
VPS8
COPS7A
DMWD
EPHB3
SPHK2
SLC25A25
NAIF1
NFX1
IER5L
TIAL1
DHX8
TUBB4B
VEZT
FGD6
TSNAXIP1
RANBP10
IGBP1
GOLGA6A
TRMT2A
RANBP1
PSAP
KDM2A
CCAR1
WBP1L
RPS6KB2
ESRRA
REEP6
PCSK4
CDK5RAP2
TTF1
CFL1
MIDN
ARHGAP19
SBDS
ETV6
BAZ2A
KBTBD2
PFKM
GNA12
DUSP6
EIF1AX
ANO6
CCDC88A
IFTAP
MTHFD1
PSMD3
FZD2
HEXIM2
ACTR1A
NCOA4
ALKBH7
TGIF1
TRIM28
PELATON
CCDC116
SLX4IP
UBE2N
ITGB1
TINAGL1
EIF2B5
RSPH14
CDC37L1
TOP1
DNM2
NTMT1
PCBP2
AKR1A1
HNRNPUL1
RAB11B
GPR137
CHAF1A
TCIM
LRRC8A
KYAT1
RABL3
GTF2E1
MYCL
ADRM1
TSPAN13
CEP41
RAB5C
UBL7
PPP6R1
NWD1
SWI5
GOLGA2
WDR36
KRTAP3-1
ITGB8
OSBPL1A
CEP170
SDCCAG8
RNF26
M6PR
KLRG1
RABGAP1L
C18orf32
YBX1
PLCH1
UBR2
VIPAS39
AHSA1
IFRD2
FTSJ1
ATG9A
ANKZF1
EIF3D
DGLUCY
UQCRQ
GDF9
IREB2
UBE2T
EGR3
POLR3E
TRIM2
OTUD3
AAR2
RAP1A
SLC2A4
CSNK2A1
GOLGA6B
ENDOG
ZNF92
FXR2
DDX3X
ZNF195
COX7B
C15orf40
HIP1R
VGF
AP3M2
RANBP3L
G3BP2
OXNAD1
DPH3
ZNF791
ZNF490
SENP3
ACTL6A
TTF2
NR6A1
AP2M1
PRRC2B
CD2BP2
HNRNPC
LRRC23
ZNF720
TMEM44
IPO11
KMT5C
TCERG1
MAP2K7
PICK1
TMCO2
TMCC1
CTTNBP2NL
PELI1
RAB5B
POLR2M
NUDCD2
HMMR
POLDIP3
TMEM52
EXPH5
SVIL
CTH
COX8A
CDK16
ZNF624
GPR158
NEMP1
PQBP1
TIMM17B
HSD17B12
DYNLT3
BORCS6
FEM1A
ZNF84
NDE1
POLR3C
RNF115
GPR108
NASP
SELENOF
HS2ST1
ZNF24
SYVN1
ETV1
PLEKHG1
DACT3
ZNF8
NFATC3
MFAP5
CCDC146
MCTS1
TRIOBP
ZNF513
DIABLO
RRAS
IP6K2
PLA2G3
BUB1B
ZNF428
KIAA0895L
HSPA13
DYRK1B
GCDH
NFIA
EDN1
DDX41
TRIM29
MORC3
KCNAB2
SOX6
C11orf58
DYNLL1
RBM22
CNPY2
ZDHHC12
KIFBP
SYNGR4
SLC20A2
OTUD5
LDHA
SMPD3
DBNL
MRPS30
FANCC
U2SURP
TCOF1
COL17A1
MAD2L1BP
GTPBP2
SLC4A2
CDK5
H2BC8
H2AC8
CD109
TCF3
DNAJB5
UROD
HECTD3
SLC3A2
EVI5
SLC25A45
TSPAN31
PSKH1
HSPH1
SCOC
MTA3
PPM1B
SIRT4
POU2F1
TBC1D10B
MYLPF
TPGS1
EOLA2
USP13
ARF4
INTS9
HMBOX1
DAAM1
TMEM33
LRRC45
CENPX
CLDN22
NCBP2AS2
NCBP2
STAT2
DDA1
ZNF286A
FBRS
PARS2
RPL15
CALCRL
SLC35B4
DKKL1
MPDU1
LOC100996842
BUB3
KRT8
MMACHC
CCDC163
HNRNPAB
TBCCD1
DNAL1
DNAJB11
ACTR2
ASPM
LPIN2
NOP53
GRN
SMC4
IFT80
ZFP36L1
PLTP
USF3
HSPA5
GSN
ZNF250
QTRT2
CCDC191
IVNS1ABP
AKIRIN2
VPS26C
EPHB1
CBX1
ARL14EP
CNOT3
JAG1
USO1
MPND
USP1
PCNX3
ABI1
ZNF107
CYCS
ACBD4
TMX2
MED19
ESYT1
EXOSC4
ZNF749
EFCAB12
RFWD3
MALSU1
ZNF37A
C12orf57
LSM10
CTXN3
UFC1
CLPP
C20orf96
PAXBP1
TPCN1
IQCD
ZSCAN20
SPTY2D1
PEMT
FAM32A
POP5
MTRNR2L8
CFAP20
TIMM10
FBXO16
IPO4
ZBTB17
NDUFS7
RIOX1
PHF14
CP
SLC7A11
RPS5
NEURL4
TMEM59
H2AX
PRMT1
RNF7
AURKAIP1
POLR1F
GHITM
DNAJC16
LSG1
ZNF500
NATD1
YWHAG
STARD3NL
DDX50
PLEKHG2
POLG
EEF1G
PMEPA1
TNFSF9
CCDC130
GABARAP
PIH1D1
SERINC3
FAM126A
NDUFS2
SELENOK
HBP1
NCLN
ZMAT2
HINT2
FZD1
TSTD2
NCBP1
ZNF443
SNRPE
SSBP1
ATG2A
CEP152
MIGA2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SZRD1
DESI2
COX14
DUS3L
NUDT19
MCM3
ETV4
LMAN2L
AGPAT1
RNF5
INTS7
DTL
MDM2
FOXP1
ARNT
ZNF687
MRFAP1L1
ZFYVE1
CMSS1
TNFAIP8
SART1
SBSPON
ZBED5
TOM1L2
DRC3
HDGFL2
UTP23
PRDM10
ZNF764
PPP2R1A
CEP20
SLC39A3
TNRC6B
ST3GAL4
ODF2
OSCAR
NDUFA3
TTC16
PTRH1
MDC1
GOLIM4
NSUN4
NRCAM
DEDD
TLE4
ING4
FBXO46
AP3D1
GSK3B
ZMYND8
HOGA1
PRCC
PC
PI4KB
DNM1L
FBXO34
XAB2
ELL
KDM4A
HNRNPA2B1
CBX3
PHKG2
SSR4
IDH3G
TBC1D25
RALY
RUVBL2
GYS1
PTBP1
TBC1D23
DOHH
ZCCHC3
MTMR14
REST
SACS
METTL11B
NRG1
SRRM4
OBI1
PRICKLE1
SNRPN
FLAD1
PLPP2
MED12
HESX1
VENTX
NADK
PSMD9
HPD
WFDC8
ZNF343
CELF3
FGD4
CER1
GADD45G
DNMT3B
DAGLB
CNPY1
LIN28B
NANOG
FBP1
PPP1R16B
MTRNR2L2
ESRP1
RIF1
GIMAP5
FBXO40
ITPRIP
BFSP1
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
USP44
GPSM3
ZNF532
SPIC
FGFR2
PDCL
CDC14B
DHX32
EEF1A1
SLC2A14
GDF3
RFX4
LRRTM4
SFRP2
TIMP4
TES
ADA2
TJP2
CARHSP1
SASH1
PGK1
AK4
CAMTA1
DUSP12
WDR49
AHCYL2
TNC
FAM120B
TBC1D16
ACVR1
UGT1A6
MACROH2A1
WNT5B
RTBDN
ALDH7A1
ANK2
VANGL2
ST18
SLC7A5
KDM3A
AASDH
SGMS2
AUH
VOPP1
PITPNM2
KCNN2
DPPA4
SLFN12
CCDC92
CCN2
DICER1
MARCKS
KLF7
DISP3
GCNT2
CDH10
CFLAR
EPB41L1
BRINP2
PALM2AKAP2
STMN1
ADAMTS16
KLF5
F11
POLB
SYNCRIP
CNGA1
CTNND2
RGS3
KCNIP4
TACC2
ACSL1
LINGO1
HMGN1
ZBTB45
ZNF202
ERMN
MBOAT2
HOXB1
SLCO5A1
C22orf39
SMAD3
TRDMT1
CD200
LLGL1
CHN2
GEMIN7
LIN28A
DCLK1
ARHGAP42
PPP1R18
FAM153B
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
TCHP
ARID5A
CNR2
CAAP1
JUP
ZFAND3
SP5
SNX16
RAD54B
PLAGL1
SET
FAM181A
ZSWIM4
MEF2C
LIMCH1
IFIT3
ZBTB40
DHRS3
LYPD1
YEATS2
SPATA12
CLCF1
CCDC167
TMEFF1
PES1
PCYT1B
THEM4
AKIRIN1
IL17RD
ACCS
RNF19A
TRPM3
PCDHB8
E2F7
MDK
ZBTB8OS
RBBP4
C1R
HNRNPDL
FSBP
CNP
NSA2
GFM2
C1orf127
ZNF318
ADAR
HLTF
IL23A
ENOPH1
SMIM14
MOSPD3
MANSC1
TCN2
DTNA
RPL27
FAT1
ABCB8
GXYLT2
CNN3
GSPT2
SYNPO2
LPCAT4
TRIM22
ZNF358
YWHAQ
RBBP6
AFF1
JPT1
SLC2A11
PDP1
SPAG9
ZNF469
RGPD2
RGPD1
TRAK2
STRADB
PCDHB5
PDE4D
STOX2
SYTL2
AKAP9
LCOR
RNF43
EXOC5
AP5M1
ADNP
ESR1
NFE2
CPVL
TSGA10IP
CDK5R1
FILIP1L
ABAT
LPP
GALNT8
CLEC9A
ZNF763
AMOTL2
GFRA1
ZNF106
TNFRSF21
INKA2
ID1
DLG2
SLCO4C1
PKNOX2
KLHL4
TMPRSS7
SPHK1
MMP10
DLX5
ERBB2
CALD1
TFDP2
PRM3
ZNF254
PER2
RASSF8
SYBU
ZNF649
ZCCHC14
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
MAP2K5
MAP3K9
PCDHGC4
INSM1
RCOR1
PCDHB13
RFFL
PAIP2
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
ZNF506
TLE3
DPPA2
PRR5L
PROM1
TUT7
ATAD2
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
CCNG2
ZBTB26
SNX27
PAG1
PDE4B
KIF21A
LOC389199
MS4A12
HEXIM1
LTBP1
USP53