ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101128 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◣ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

REST
MED12
JPT1
SPIC
MTF2
RIF1
SOX6
UGT1A6
NRG1
OBI1
ZNF343
KLF5
ABCB8
PRICKLE1
CFLAR
VANGL2
FLAD1
GSN
PROM1
DUSP12
NADK
PMEPA1
KIFBP
SLC2A11
FOXP1
TDGF1
FEZ2
ZNF318
STMN1
SNRPN
ZNF469
MBOAT2
PRRC2B
IER5L
PDCL
SLC35G4
FGD4
LRRTM4
FBXO40
SLC35G5
RASSF8
FAM227A
CBY1
MRGPRX3
NOTCH1
CNR2
DEFB108B
LINGO1
DNMBP
LDAH
CCL2
DPPA2
FASTKD1
RIMKLB
WDFY2
GLIPR2
IFRD1
C1R
DISP3
DERA
DAGLB
AK4
MS4A12
SET
TRIML2
ADA2
CNGA1
TMEM202
SLC7A7
MDK
ZNF532
ZNF37A
TUBB
WARS1
CLEC9A
SLCO4C1
PINK1
SEPHS2
FAM169A
CAAP1
CYTH2
UFD1
CDC45
CCDC169-SOHLH2
CCDC169
LIN28A
KRT8
ELP6
GCNT2
ZSCAN2
RAPH1
GDF3
SUCLA2
SLC35G3
GEMIN7
FBXL19
INKA2
DDX20
TTC23L
SLFN12
NDUFAF3
DALRD3
CHMP7
FOXO6
SRRM4
MTRNR2L2
DHRS3
AMOTL2
TRIM22
SMARCB1
CAPRIN1
SNX16
TNFAIP8L1
CEP41
DDX3X
ARHGAP42
MX1
F11
CEP85L
HDAC9
BLOC1S4
GADD45G
ZNF777
PTMA
SERPINB6
ACSBG2
MED15
RUNX1T1
LEKR1
DGLUCY
DCLK1
GPR1
CILK1
WDR11
ANKDD1B
TRIM60
GXYLT1
ARMCX5-GPRASP2
ARMCX5
ARHGAP18
IFIT3
TSTD2
NCBP1
COX7B
AASDH
PPP1R8
ZNF587
LACTBL1
CCDC92
ZNF140
FILIP1L
AUH
CSRNP2
HHIPL1
CCDC85C
WASF1
CDC40
OLIG3
PSMD9
HPD
MPPE1
C22orf39
OGT
NDUFB5
MRPL47
CELF3
SLC2A14
ZIK1
FKBP7
NUBP1
VENTX
LUC7L2
FMC1-LUC7L2
FMC1
HMGCL
PDHB
LMAN2L
API5
CEP78
ST18
THEM4
H2AC15
H2BC15
IGF1
TJP3
KLF7
ANAPC15
ALAD
NMRK2
TACC2
CAMKV
HEXIM1
GRK6
ARHGEF11
PHLDB2
KDM4E
NRARP
RUFY1
MACROH2A1
MANSC1
NUFIP2
SRPK2
CCN2
SHROOM3
GAB2
STK35
SH2D4A
LRRTM3
LPP
FBP1
CFL1
EPB41L1
FNBP1L
DLG3
ZNF775
RAD54B
FSBP
PLAGL1
NASP
NCLN
RIOX1
ESRP1
EID3
TMCC1
UFSP2
HSPH1
CCNG2
ZNF524
FIZ1
RBM41
RNASEH1
HESX1
FRAT1
LEMD2
ZNF630
YPEL2
PCDHA10
UBQLN4
LAMTOR2
IER3
KMT2B
MAD2L1BP
GTPBP2
EVI5
AMT
SACS
CD200
FANK1
ANP32B
ETV1
KLHL12
CALD1
UBQLN1
ATAD3B
AHCYL2
ANK3
DYRK1B
LMNA
PRDM1
MEX3A
EFNA1
DDX31
FIG4
AK9
CCDC90B
ST3GAL4
ZNF14
GLIPR1L2
PTHLH
PUM2
PHAX
TIMM50
USP54
NUP160
KIAA0895L
CD300LB
STK38
PALB2
DCTN5
KCNN2
CCDC167
RSPH14
NUP62
IL4I1
ATF5
PRSS47
SASH1
CLIC6
ZFYVE1
TSPAN14
CDX2
KIAA1671
FUZ
WDR74
TMEM220
TP53INP2
USP11
FAM120B
IREB2
C9orf16
TCF4
DMRTA2
TNPO2
GID4
ATPAF2
ZNF561
PTPN12
EXOSC5
BCKDHA
KHSRP
UACA
IZUMO1
LTBP1
RAP1A
PIPOX
METTL11B
HMGB1
PLPP2
DDX17
WFDC8
ARID2
CER1
PHF5A
ACO2
DNMT3B
CNPY1
MTRNR2L8
LIN28B
NANOG
PPP1R16B
ETV4
IQCH
AAGAB
GIMAP5
ITPRIP
FZD2
HGS
ARL16
BFSP1
ZFC3H1
THAP2
PDPN
CCT2
USP44
GPSM3
NDUFS5
WBP1L
FGFR2
TNRC18
CDC14B
DHX32
MCCC1
EEF1A1
RFX4
ARIH1
SFRP2
TIMP4
TES
KDM2A
TJP2
NEBL
CARHSP1
ZNF304
GET3
DST
PGK1
SPRY4
CAMTA1
SINHCAF
SNAPC3
WDR49
PLEKHG1
H3-3B
TNC
TOMM40
TBC1D16
NDST1
ACVR1
C20orf96
WNT5B
RTBDN
PDIA4
CHD6
ALDH7A1
ANK2
SIX2
PXMP4
SLC7A5
KDM3A
ZNF195
SGMS2
SRSF7
VOPP1
SLC33A1
PITPNM2
OSBPL1A
SLC25A36
DPPA4
MSANTD4
DICER1
MARCKS
NRCAM
WDR36
ZSCAN9
SLC16A13
TESK2
TMUB2
CDH10
VASH2
CFAP20
ZNF428
SHF
PIK3R3
OGA
BRINP2
PALM2AKAP2
KRTAP3-1
ETV6
TRMT2A
RANBP1
ADAMTS16
DACT3
POLB
CELSR3
SYNCRIP
CTNND2
RGS3
DHX8
DPP3
KCNIP4
ACSL1
RASAL2
CD2BP2
HES5
HMGN1
ZBTB45
PIN4
ZNF202
KNTC1
ERMN
HOXB1
SH3GL3
ESRRA
GADD45A
CP
TIAL1
SLCO5A1
PLCH1
ISL2
PIF1
SMAD3
VEZT
FGD6
TRDMT1
LLGL1
CHN2
EMC9
TUT1
OAZ2
SLC25A11
RNF167
YLPM1
PPME1
C2CD3
CEP170
PPP1R18
KLHL24
SDCCAG8
FAM153B
G3BP1
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
ST6GAL1
CTTNBP2NL
F11R
JUP
ZFAND3
SFPQ
SP5
CEP63
ANAPC13
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
FAM181A
ZSWIM4
MEF2C
LIMCH1
ETFB
ITGB1
ZDHHC5
STK32C
LRRC27
ZBTB40
LYPD1
ERGIC2
YEATS2
SPATA12
EGR3
CLCF1
EP300
TMEFF1
PES1
PCYT1B
HEXIM2
SAXO1
RRAGA
PWWP2A
AKIRIN1
ADRM1
IL17RD
ACCS
RNF19A
ATAT1
TRPM3
PCDHB8
E2F7
POLDIP3
ZBTB8OS
RBBP4
HNRNPDL
CNP
NSA2
GFM2
C1orf127
CCDC88A
ADAR
TSNAXIP1
RANBP10
JAG1
HLTF
IL23A
ENOPH1
TIA1
SMIM14
MOSPD3
HSPA13
ZBTB6
TCN2
IPO11
HBP1
DTNA
NKIRAS1
ARF4
RPL27
FAT1
GXYLT2
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
ZNF358
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
ACTR1A
PDP1
SPAG9
RGPD2
RGPD1
OARD1
NFYA
TRAK2
STRADB
PCDHB5
SPAG4
PDE4D
STOX2
SYTL2
AKAP9
PIMREG
LCOR
RNF43
EXOC5
AP5M1
PELI1
ADNP
ESR1
GDF5
CEP250
NFE2
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
IP6K2
CDK5R1
ABAT
GALNT8
HACL1
BTD
ZNF763
RRBP1
GFRA1
ZNF106
HIP1R
RSF1
AAMDC
VGF
TNFRSF21
PSME3IP1
ID1
CDK12
DLG2
PKNOX2
KLHL4
POLR3E
SIRT4
TMPRSS7
SPHK1
MMP10
RSPRY1
DLX5
ERBB2
HEBP2
CCDC130
TFDP2
PRM3
SCOC
ZNF254
PER2
ASMTL
SYBU
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
METTL7A
RIMBP2
ZNF608
SOX5
MAP2K5
C11orf58
MAP3K9
PCDHGC4
INSM1
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
RFFL
PAIP2
ARHGEF37
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
ELOVL5
ZNF506
TLE3
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
TUT7
DDX5
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
C6orf132
ZBTB18
BCL9
ZBTB26
SNX27
RBMX
PAG1
HNRNPUL1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
RPL15
IFTAP
COPS7A
MIDN
TBC1D31
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
PACRGL
ZNF250
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
RBBP9
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
SMARCA2
ZSCAN31
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
UBTD2
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
PTX3
TMX2
RTRAF
MED19
TRIB1
UBR2
HES6
IPO4
OR13C2
GBA
TBC1D10B
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
BAZ2A
ZNF84
TMEM132A
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
CCPG1
C15orf65
ARHGEF19
ZNF474
GAS2L3
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
SMC4
IFT80
DPP4
KANSL1L
TSPAN13
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
ANKRD65
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
TCF7L2
FGF19
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
CCDC171
TBC1D9
NEMF
LYSMD3
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
CPA5
ZNF593
C1orf232
STAU2
ACTR2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
NCOA4
APPL2
ZHX3
ZNF8
SPTBN1
ZNF268
RAI14
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
SLC4A7
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
TGIF1
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
CLIC1
RBM47
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
FRRS1L
PIK3CA
NDE1
NFASC
CX3CL1
LMO4
ZNF737
HLCS
RIPOR3
MYO1B
TTI2
EFCAB8
DCLRE1C
C16orf78
DDA1
MEA1
KLHDC3
INTS12
GSTCD
RAB11B
ING4
ZNF286A
WLS
GNA12
DAOA