ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130061 | BJ
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◣ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTRNR2L2
RGPD2
RGPD1
EEF1A1
MTRNR2L8
MTRNR2L10
MTRNR2L9
MTRNR2L6
HK1
FIGNL1
DIPK1A
FNDC3B
FRMD5
OTUD7B
CSPP1
DACT3
MTRNR2L1
ASXL2
OR13C2
CCDC171
KIF4B
RHOB
CHAMP1
YWHAZ
NPFFR1
SLAIN1
RBFOX2
TNFRSF19
MYOT
KRTAP2-3
ZNF337
LIG4
CCDC9B
NRG1
RRAS2
CSAD
GJA9
WDR26
AGAP5
PDIA5
NCOA6
SCG2
BTN3A2
SOX6
ABL2
CALCRL
PHF3
PPP1R8
ZNF852
PARP2
TRAPPC13
SHLD3
OR4F6
SIAE
UBAP1L
DDX46
KLF5
ZNF624
PTPRO
KIAA0895
ANLN
PIGL
MED23
ALPK1
TMCC1
ITGAV
TIAM2
MFF
GLYATL2
FABP9
GPATCH8
TRPM6
GET1
ZFY
ESPNL
DTNA
SMARCA2
PTK2
KIAA1217
TRAF3IP2
CAPZA1
UEVLD
ARCN1
ANO3
GATB
JMY
TJP1
ZNF136
LRIG3
POLR3C
FAM222B
HCLS1
SLC36A1
KRTAP4-12
DOCK9
NUFIP2
FREM1
IGF1
CCDC68
TMEM117
TNFAIP6
PPARG
THEMIS
SEC16B
ZNF583
NRBF2
TTC8
SGK1
COX7A2L
LRRC66
AKNAD1
KRTAP3-1
TBC1D19
FAM210B
HIPK3
YOD1
EMC1
SHISAL2B
OR6C4
HSD3B1
ZNF814
GASK1B
GPR1
ZNF565
ZNF146
SHOC2
ABCD3
NUBPL
EPHB6
EIF4E
TMEM258
FEN1
PGM5
ADH4
TUBA1A
MINPP1
BLM
RACGAP1
RNF14
CRTAM
ZNF821
TFDP2
CPS1
SET
WTAP
SOD2
PTCHD4
CDC27
OR4F4
RIOK1
CAGE1
FAM200A
RNF4
SERPINB4
GBP3
NRARP
MTF2
REST
FAM227A
CBY1
SACS
PIPOX
METTL11B
DNMBP
NDUFB5
MRPL47
HMGB1
PTMA
HDAC9
SRRM4
OBI1
PRICKLE1
FUZ
SNRPN
GRK6
FLAD1
NOTCH1
PLPP2
IFRD1
DDX17
GSN
MED12
HESX1
ETV1
TDGF1
VENTX
PMEPA1
NADK
PSMD9
HPD
WFDC8
ZNF343
CELF3
FGD4
ZSCAN2
ARID2
CER1
PHF5A
ACO2
GADD45G
IER5L
DNMT3B
DAGLB
CNPY1
LIN28B
NANOG
KMT2B
FBP1
PPP1R16B
ETV4
CYTH2
IQCH
AAGAB
ESRP1
FBXL19
RIF1
GIMAP5
KIFBP
FBXO40
ITPRIP
FZD2
HGS
ARL16
BFSP1
ZFC3H1
CCDC169-SOHLH2
CCDC169
THAP2
LRRTM3
PDPN
CCT2
USP44
GPSM3
CEP41
NDUFS5
ZNF532
SPIC
WBP1L
CAPRIN1
FGFR2
TNRC18
PDCL
CDC14B
TUBB
DHX32
ZNF775
DGLUCY
MCCC1
SLC2A14
GDF3
RFX4
LRRTM4
ARIH1
SFRP2
WDFY2
TIMP4
TES
KDM2A
ADA2
TJP2
DDX3X
NEBL
CARHSP1
FOXP1
ZNF304
GET3
DST
SASH1
PGK1
AK4
SPRY4
CAMTA1
SINHCAF
SNAPC3
DUSP12
WDR49
PLEKHG1
AHCYL2
H3-3B
TNC
TOMM40
FAM120B
TBC1D16
NDST1
ACVR1
UGT1A6
C20orf96
UFD1
CDC45
MACROH2A1
WNT5B
RTBDN
PDIA4
CHD6
ALDH7A1
ANK2
VANGL2
SIX2
ST18
PXMP4
SLC7A5
KDM3A
ZNF195
AASDH
SGMS2
AUH
SRSF7
VOPP1
SLC33A1
PITPNM2
KCNN2
OSBPL1A
SLC25A36
DPPA4
SLFN12
CCDC92
CCN2
MSANTD4
DICER1
FOXO6
MARCKS
CFL1
KLF7
PRRC2B
NUP160
NRCAM
DISP3
WDR36
ZSCAN9
SLC16A13
TESK2
GCNT2
TMUB2
CDH10
VASH2
WDR74
CFLAR
CFAP20
EPB41L1
ZNF428
SHF
PIK3R3
OGA
BRINP2
PALM2AKAP2
ETV6
STMN1
TRMT2A
RANBP1
ADAMTS16
UBQLN4
F11
HSPH1
POLB
CELSR3
SYNCRIP
CNGA1
CTNND2
RGS3
DHX8
DPP3
KCNIP4
TACC2
ACSL1
LAMTOR2
RASAL2
CD2BP2
LINGO1
HES5
HMGN1
ANAPC15
ZBTB45
CSRNP2
PIN4
ZNF202
KNTC1
ERMN
MBOAT2
HOXB1
SH3GL3
ESRRA
GADD45A
CP
TIAL1
SLCO5A1
PLCH1
ISL2
PIF1
C22orf39
SMAD3
VEZT
FGD6
TRDMT1
CD200
LLGL1
CHN2
GEMIN7
LIN28A
EMC9
TUT1
OAZ2
SLC25A11
RNF167
DCLK1
ARHGAP42
YLPM1
PPME1
C2CD3
WASF1
CDC40
CEP170
PPP1R18
KLHL24
SDCCAG8
FAM153B
G3BP1
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
RAB30
TCHP
ARID5A
EMSY
CNR2
CAAP1
ST6GAL1
CTTNBP2NL
F11R
JUP
ZFAND3
SFPQ
SP5
SNX16
CEP63
ANAPC13
RAD54B
PLAGL1
ZFYVE1
GOLGB1
ZNF627
TLX3
BORCS6
H4C15
H4C14
FAM181A
ZSWIM4
MEF2C
LIMCH1
ETFB
ITGB1
ZDHHC5
STK32C
LRRC27
KRT8
IFIT3
ZBTB40
DHRS3
LYPD1
ERGIC2
YEATS2
SPATA12
EGR3
CLCF1
EP300
CCDC167
TMEFF1
PES1
PCYT1B
KIAA0895L
HEXIM2
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
ADRM1
IL17RD
ACCS
RNF19A
ATAT1
TRPM3
PCDHB8
E2F7
POLDIP3
MDK
ZBTB8OS
RBBP4
C1R
HNRNPDL
FSBP
CNP
NSA2
GFM2
C1orf127
ZNF318
CCDC88A
ADAR
TSNAXIP1
RANBP10
JAG1
HLTF
IL23A
ENOPH1
TIA1
SMIM14
ZNF37A
MOSPD3
HSPA13
ZBTB6
MANSC1
TCN2
IPO11
HBP1
NKIRAS1
ARF4
RPL27
FAT1
ABCB8
GXYLT2
CNN3
ZCCHC12
GSPT2
SENP8
MYO9A
SYNPO2
LPCAT4
TRIM22
ZNF358
PSMB7
YWHAQ
RBBP6
CNKSR3
AFF1
ACTR1A
JPT1
SLC2A11
PDP1
SPAG9
ZNF469
OARD1
NFYA
TRAK2
STRADB
PCDHB5
SPAG4
PDE4D
STOX2
SYTL2
AKAP9
PIMREG
LCOR
RNF43
EXOC5
AP5M1
PELI1
ADNP
ESR1
TCF4
GDF5
CEP250
NFE2
BBS7
WBP11
C12orf60
MMACHC
H2AZ2
CCDC163
CPVL
TSGA10IP
UQCRQ
GDF9
SPHK2
IP6K2
CDK5R1
FILIP1L
ABAT
LPP
GALNT8
CLEC9A
HACL1
BTD
ZNF763
RRBP1
AMOTL2
GFRA1
ZNF106
HIP1R
RSF1
AAMDC
VGF
TNFRSF21
PSME3IP1
INKA2
ID1
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
POLR3E
SIRT4
TMPRSS7
SPHK1
MMP10
RSPH14
RSPRY1
DLX5
ERBB2
CALD1
HEBP2
CCDC130
PRM3
SCOC
ZNF254
PER2
ASMTL
RASSF8
SYBU
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
METTL7A
RIMBP2
ZNF608
SMARCB1
SOX5
NASP
MAP2K5
C11orf58
MAP3K9
PCDHGC4
INSM1
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
IREB2
ELOVL5
ZNF506
TLE3
DPPA2
PRR5L
DNM1L
SDHD
TBC1D17
AKT1S1
PROM1
TUT7
DDX5
ATAD2
DNM2
INTS9
HMBOX1
AFAP1
RIMKLB
C6orf132
ZBTB18
BCL9
CCNG2
ZBTB26
SNX27
RBMX
PAG1
HNRNPUL1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
LOC389199
RPL15
IFTAP
MS4A12
HEXIM1
LTBP1
COPS7A
RAP1A
MIDN
TBC1D31
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
PACRGL
ZNF250
RAB34
PWWP3A
PNRC1
CHD8
BCAT1
CTH
CDH6
SPRING1
RNFT2
RBBP9
CHMP7
LDB1
RAB4B
TAX1BP3
PAXBP1
EMC6
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
ZSCAN31
PHLDB2
MRPS30
FEM1A
ARHGAP24
HNRNPC
FZD1
UBTD2
EIF1AX
ADGRA1
SALL2
RGS12
C2CD4D
LNX1
MCM7
AP4M1
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
RTRAF
MED19
TRIB1
UBR2
HES6
IPO4
SERPINB6
GBA
TBC1D10B
OLIG3
NARF
MYLPF
PEX11G
PLEKHA5
KIAA1522
ERV3-1-ZNF117
ERV3-1
PGM2L1
MAST4
GTF2H4
NUP214
COX8A
ETFDH
C4orf46
ZSCAN10
OGT
BAZ2A
ZNF84
MAD2L1BP
GTPBP2
TMEM132A
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
CCPG1
C15orf65
ARHGEF19
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
SAPCD2
PBX1
CRISPLD1
XAB2
CITED2
ZBED5
SMC4
IFT80
DPP4
KANSL1L
TSPAN13
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
KXD1
KCTD6
ITGB8
IFT27
BTG1
GOLPH3L
CCL26
GRIN3A
ANKRD65
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
FGF19
APH1A
ZNF273
PPP1R15A
RBP1
CPSF4L
MMRN1
CCAR1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
TBC1D9
NEMF
LYSMD3
USP54
MEGF9
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
FNBP1L
CPA5
CD300LB
ZNF593
C1orf232
STAU2
ACTR2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
ZNF292
GGH
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ST7
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
NCOA4
APPL2
ZHX3
ZNF8
PTPN12
ZIK1
SPTBN1
ZNF268
LMAN2L
RAI14
DDX20
SEPTIN9
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
SLC4A7
UBE2T
SUFU
PTPRD
MTHFD1
TOMM40L
TGIF1
ERICH6B
SMC3
MTDH
METTL9
WDR33
DSE
ZNF277
DOCK4
CIAO2A
ABLIM1
TSPYL4
EIF3F
LRRC23
NEK2
INSYN2B
MAPK14
ZBTB38
REEP6
PCSK4
LDAH
DACH2
ICE1
ENOX2
NDUFB4
CDK5RAP2
FXR1
LGR6
IGDCC3
XPC
LSM3
EID3
NCLN
KBTBD2
DYNLL1
NME7
BLZF1
SLC3A2
RIOX1
CLIC1
RBM47
VMP1
PTRH2
CENPA
CPNE2
KDELR2
ZNF548
FRRS1L
PIK3CA
NDE1
NFASC
CX3CL1
LMO4
ZNF737
FEZ2
ANK3
HLCS
RIPOR3
MYO1B
TTI2
TMEM220