ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532164 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◣ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SRRM4
DNMBP
MTF2
EEF1A1
NANOG
SACS
PIPOX
PLPP2
PRICKLE1
REST
FAM227A
CBY1
SOX6
NADK
FBXO40
HMGB1
CARHSP1
PTMA
CDC14B
TMEFF1
CYTH2
TES
CNPY1
FAM120B
WNT5B
SNRPN
OBI1
DDX17
ESRP1
GIMAP5
ZNF775
IER5L
RIF1
MEX3D
NDUFB5
MRPL47
PMEPA1
IQCH
AAGAB
ZNF532
KCNN2
DDX3X
CDH10
LIN28B
HGS
ARL16
LRRTM3
C20orf96
METTL11B
LIN28A
GPSM3
ZBTB45
FBP1
CER1
ARID2
HMGN1
SMIM14
PHF5A
ACO2
GADD45G
FBXL19
GCNT2
HDAC9
USP44
IL17RD
SNAPC3
SINHCAF
SGMS2
ZFC3H1
THAP2
PODXL
FAT1
FGD4
VANGL2
GDF3
PCDHB5
CELF3
KMT2B
AHCYL2
TACC2
LINGO1
PSMD9
HPD
STOX2
PRDM14
TJP2
NOTCH1
IGDCC3
FGFR2
SLC2A14
BORCS6
CEP41
ZNF304
CCDC169-SOHLH2
CCDC169
DPPA4
ZNF506
GRK6
SLFN12
ZNF202
MARCKS
ERBB2
PGAP3
RNF213
ETV4
RTBDN
HSPA13
CCDC92
AFF1
NRG1
SLCO5A1
SLC25A36
ARIH1
TDGF1
RFX4
SRSF7
ISL2
MDK
DISP3
ARHGEF19
TRAK2
STRADB
BRINP2
UBQLN4
LAMTOR2
KLF7
E2F7
F11
PDPN
ADA2
ZBTB8OS
RBBP4
HESX1
DAGLB
CCN2
CDH6
CAPRIN1
KBTBD2
VASH2
TUBB
FUZ
SH2D3C
PDP1
ALDH7A1
SLC16A13
ADD2
C6orf132
PTPN9
FOXO6
PLCG1
PDIA4
POLB
PAG1
CFL1
ACVR1
ETV1
KIFBP
PDCL
SPRY4
CCT2
AFAP1
LOC389199
AASDH
OAZ2
EP300
GRIN3A
CD200
HEBP2
TMUB2
HBP1
SMAD3
ZSCAN10
TSNAXIP1
RANBP10
ZSCAN2
FAM153B
TNRC18
TESK2
ARID5A
HES6
ZNF428
ZNF627
SFRP2
CSRNP2
SNX27
SYNCRIP
ZNF140
ANAPC15
ESR1
PPP1R16B
SIX2
TUT7
COX20
IFRD1
AMOTL2
ASMTL
TRMT2A
RANBP1
SET
HNRNPDL
ENOPH1
NUP160
CTTNBP2NL
TBC1D16
MSANTD4
CFAP20
TIAL1
ZDHHC5
H3-3B
RBP1
VENTX
KANSL1L
PBX1
IGSF9
ADRM1
ANK2
DPP3
CDK5R1
ZNF576
IRGQ
TRIM38
BBS7
TRIB1
YEATS2
TCHP
CCDC124
SALL4
ZFAND6
WBP11
C12orf60
KXD1
CEP170
SDCCAG8
SMARCB1
EPHA2
ADAMTS16
RAPGEF2
GPBP1
CHD6
TAX1BP3
EMC6
PPP1R18
VGF
SASH1
ZFAND3
PTPRK
GET3
RGS3
DHX32
RAD54B
FSBP
PER2
CTH
GID4
ATPAF2
NELFCD
LDB1
PACSIN3
SH3GL3
ESRRA
LRRTM4
PLCH1
PES1
TCN2
DLX5
LGR6
IP6K2
BCL9
GPT2
PPME1
C2CD3
NASP
ZBTB6
PTX3
OGA
RRBP1
ZIC1
WDFY2
N4BP2L2
POLR3E
GADD45A
USP53
HK2
FZD2
DAAM1
WASF1
CDC40
ZNF763
TIMP4
CAMKV
ETV6
ZSWIM4
ITGB1
CYP4F11
OLFM2
CELSR3
MMACHC
CCDC163
NIN
ZNF195
HOXB1
EXOC5
AP5M1
MIDN
FAM76B
CEP57
NARF
PEX11G
FZD10
MACROH2A1
TCF7L2
FOXN3
NEUROG1
STRA6
INKA2
TRPM3
YWHAQ
RSF1
AAMDC
AK4
ATAT1
SPAG4
CCNG2
RAB5C
CHRNA5
SBK1
DHX8
TNFRSF21
CBX1
ADNP
MCCC1
SYNPO2
ST18
AUH
EIF1AX
USP37
CNOT9
LLGL1
ARF4
RBBP6
RPUSD4
FAM118B
KIF3C
SCD
TNPO1
TMEM44
ZBTB26
CCDC146
KNTC1
UQCRQ
GDF9
RAB30
CCDC88A
ZNF3
CABYR
HNRNPAB
VRTN
ZNF606
HLTF
CPVL
SALL2
SERPINH1
GSPT2
ACTR1A
THBS2
DGLUCY
DCLK1
RAB34
TBC1D17
AKT1S1
ZFHX2
WBP1L
WDR49
ACSL1
INSM1
ZNF43
KCNN1
VEZT
FGD6
ZNF197
PRDM2
MAP7D1
SEC22C
TRAPPC3
SS18L2
EMSY
SPRING1
RNFT2
FLAD1
ADGRA1
QPRT
SESN2
TMEM132A
KDM1A
YWHAZ
SPINDOC
IREB2
SHROOM3
ZNF85
NCL
RPL27
ELOVL5
ZNF101
NR2F1
RUNX1T1
PIM1
ZNF358
OTUD5
NKIRAS1
RPL15
SLC2A4
PLEKHG2
SRSF6
PDCD2
LMNA
MEX3A
LPIN1
PAXBP1
ATOH1
ZNF135
TTC13
CDH9
CELSR1
TOMM40
LPCAT4
METTL7A
TAL1
LZTS1
EMC9
MOSPD3
NOL4
TDRP
PLA2G3
CBX2
MMD
ARHGAP42
CD2BP2
MRPS23
SC5D
JADE1
ESR2
STK32C
LRRC27
DAZAP1
FILIP1L
CALD1
SLC4A2
CDK5
ZNF589
FN1
DNAH2
ZNF469
DPPA2
MIA3
ACTL6B
ACAA1
PIMREG
GPR137
ABI2
SOGA1
ERGIC2
GEMIN7
TLX3
EGR3
RAB4B
NOTCH3
ZNF528
IPO11
FBXO46
PGM2L1
C18orf32
DHRS3
PNRC1
UBE2T
HAS3
ZSCAN9
PJA2
RAD23B
TSGA10IP
DNM1L
PTP4A1
GSK3A
ZNRF1
DACT3
KCNIP4
TUT1
SRPRA
HELLS
H2AZ2
SAPCD2
HECTD4
CSRP2
KLHL24
ST6GAL1
PSME3IP1
RSPRY1
REEP6
PCSK4
MXD1
ZNF708
DDHD1
TP53BP2
CDH7
ZNF300
JAG1
ZNF649
PTCD2
MRPS27
KLHL5
SLX4IP
RBMS2
C1orf100
H4C15
H4C14
PWWP2A
SCOC
ASF1A
VOPP1
KMT5A
ZNF8
PSKH2
E2F1
MYH2
PHC2
CENPF
ANKRD9
XAB2
CHMP4B
SLC35B4
TP53I11
TOX2
SLC33A1
STAU2
DDX20
RIOX1
GJC1
TEX19
CRNDE
DYNLL1
TEAD2
RBM6
EMC3
PROSER1
NHLRC3
CCDC88C
KDM2A
GOLGB1
HNRNPUL1
TSPAN13
OXNAD1
DPH3
ACYP2
BAZ1B
PSME4
ZBTB8B
ZNF180
ZIK1
ZNF697
MAPK8
GAS1
GTF2IRD1
STMN1
TCF4
YWHAG
RPA2
UCHL5
RO60
PHLPP1
FBLIM1
ZNF273
TBC1D9
CDR2
FMNL2
ZBTB40
ZNF608
RBBP9
NEK2
HCN4
PIK3R3
PIF1
SLC10A2
PELI1
ZNF624
ZNF764
SNX2
SPATA12
RNF157
HOXC10
FMNL3
CCDC172
ZNF71
PPP1CC
LRRN1
SPIN1
G3BP1
INTS9
HMBOX1
FEM1A
BAMBI
PHF12
ATAD2
ZNF124
CDK4
CLDN6
SLCO4C1
PYDC5
IFI16
SLC25A25
NAIF1
ZNF670
ZNF37A
G3BP2
COPS7A
SMARCA2
SMC4
IFT80
SEL1L
MYO1B
CCDC174
RCAN1
CCNA2
STRADA
ARID4A
OARD1
NFYA
TBC1D31
EXOSC5
BCKDHA
GLUL
SNRPD3
GUCD1
THEM4
ZCCHC14
H4C9
CITED2
BSDC1
HIP1
AP3M2
CREM
SPRY2
NELL2
ENAH
KCNJ10
PSMB7
TBC1D10B
MYLPF
BEND5
SLC15A2
HEXIM2
MPRIP
PHB2
PRR12
GGPS1
ARID4B
PPP1R12C
STAT2
IFT27
LRRC8A
KYAT1
HES2
CCDC152
TMEM39B
TIMP2
NSA2
GFM2
STAG3
GPC2
CDK16
ZNF100
CCDC130
NODAL
ZNF143
KIAA0754
MAP3K9
PTPN12
PCCA
H2AC20
H2BC21
MYMX
EEF1AKNMT
DUSP7
OR51H1
WBP2
RAB2A
CTIF
GTF2H4
RABL3
GTF2E1
ACSBG1
GPAT4
MEGF9
CCNJ
ANKRD50
FNBP1L
FAM185A
DKKL1
REC8
LCK
LARGE2
RND1
SCNN1A
ZNF277
DOCK4
LTBR
PSD
FBXL15
SYTL2
SLC66A2
ARMC3
ZNF738
IZUMO1
KIFC3
PIN4
SPHK2
ICE1
CLP1
ING2
ELP3
SLTM
ZNF714
FGF19
VPS50
HEPACAM2
CSDE1
PBRM1
GNL3
ADAMTS10
KDM3A
KIAA0895L
CD300LB
HNRNPA0
ZFP64
ABCC5
HNRNPR
NBEAL1
KLK13
TUBB2B
FBXO11
ERV3-1-ZNF117
ERV3-1
TXLNG
THAP1
DUSP4
ZNF250
RBM47
SF1
TMX2
MED19
YPEL5
L3MBTL4
SND1
DST
CNN3
ZNF106
ARSD
OSBPL9
RAB5A
EFHB
NF2
SPSB2
TTF2
CIAO2A
INSYN2B
BMF
CCND1
NECTIN3
TMEM249
CACYBP
USP1
AGO2
SREBF2
HP1BP3
APH1A
DUSP10
CKB
PFKFB3
PHLDB2
CYCS
ZFP62
NHSL1
F2RL1
ELL
PNRC2
ATP5MC1
RIC8B
CDC25A
HNRNPL
ILF3
ZNF548
ZNF56
H2AX
LRRC45
CENPX
TMEM256
NEMF
HDGFL3
ZBTB2
DUSP12
HHIPL1
CCDC85C
SERTAD3
GRAMD2B
STMN2
TRMT1L
SWT1
HNRNPD
RTN4
NUFIP2
AGPAT1
RNF5
GSN
MED12
WFDC8
ZNF343
DNMT3B
MTRNR2L8
MTRNR2L2
TMCC1
ITPRIP
BFSP1
NDUFS5
SPIC
NEBL
FOXP1
PGK1
CAMTA1
PLEKHG1
TNC
NDST1
UGT1A6
UFD1
CDC45
PXMP4
SLC7A5
PITPNM2
OSBPL1A
DICER1
PRRC2B
NRCAM
WDR36
WDR74
CFLAR
EPB41L1
SHF
PALM2AKAP2
KRTAP3-1
KLF5
HSPH1
CNGA1
CTNND2
RASAL2
HES5
ERMN
MBOAT2
CP
C22orf39
TRDMT1
CHN2
SLC25A11
RNF167
YLPM1
CCL2
NEDD9
CNR2
CAAP1
F11R
JUP
SFPQ
SP5
SNX16
CEP63
ANAPC13
PLAGL1
ZFYVE1
FAM181A
MEF2C
LIMCH1
ETFB
KRT8
IFIT3
LYPD1
CLCF1
CCDC167
PCYT1B
SAXO1
RRAGA
AKIRIN1
ACCS
RNF19A
PCDHB8
POLDIP3
C1R
CNP
C1orf127
ZNF318
ADAR
IL23A
TIA1
MANSC1
DTNA
ABCB8
GXYLT2
ZCCHC12
SENP8
MYO9A
TRIM22
CNKSR3
JPT1
SLC2A11
SPAG9
RGPD2
RGPD1
PDE4D
AKAP9
LCOR
RNF43
GDF5
CEP250
NFE2
ABAT
LPP
GALNT8
CLEC9A
HACL1
BTD
GFRA1
HIP1R
ID1
CDK12
DLG2
PKNOX2
KLHL4
SIRT4
TMPRSS7
SPHK1
MMP10
RSPH14
TFDP2
PRM3
ZNF254
RASSF8
SYBU
ZCCHC8
RIMBP2
SOX5
MAP2K5
C11orf58
PCDHGC4
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
RFFL
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
EGFR
KLF17
TLE3
PRR5L
SDHD
PROM1
DDX5
DNM2
RIMKLB
ZBTB18
RBMX
PDE4B
FAM220A
KIF21A
IFTAP
MS4A12
HEXIM1
LTBP1
RAP1A
POU2F1
TSPAN19
LRRIQ1
BTBD3
PACRGL
PWWP3A
CHD8
BCAT1
CHMP7
RABGAP1L
CALR3
C19orf44
HOXA9
KMT5C
ZSCAN31
MRPS30
ARHGAP24
HNRNPC
FZD1