ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SACS
PIPOX
HMGB1
DNMBP
HDAC9
OBI1
DNMT3B
METTL11B
REST
MTF2
FAM227A
CBY1
FBXO40
SLC7A5
PLPP2
GIMAP5
SFRP2
PHF5A
ACO2
SOX6
SRRM4
DAGLB
TNC
DHX32
IFRD1
FBP1
NANOG
LIN28B
LRRTM3
TUBB
PPP1R16B
PSMD9
HPD
ACVR1
FUZ
GRK6
CER1
CNPY1
DDX17
PTMA
HESX1
FGFR2
PXMP4
ERBB2
RFX4
TOMM40
NADK
SNRPN
SLC2A14
C20orf96
ZNF304
SGMS2
ZNF608
TDGF1
LRRTM4
NDUFB5
MRPL47
CARHSP1
HGS
ARL16
ADA2
USP44
IZUMO1
ALDH7A1
RTBDN
PRICKLE1
CD2BP2
ZNF428
UFD1
CDC45
ZFC3H1
THAP2
NDUFS5
CDC14B
FAT1
CELF3
TESK2
WFDC8
NRARP
CCT2
IER5L
PDPN
GET3
CD200
KIFBP
WDR49
TLX3
GADD45G
FGD4
GPSM3
PYDC5
IFI16
GDF3
NRG1
DST
PIF1
BBS7
CTNND2
FBXL19
ANK2
HOXB1
RAB30
LLGL1
HIP1R
FAM153B
YLPM1
CEP170
SDCCAG8
TRIM22
BRINP2
ETV1
ZNF195
CPVL
ERMN
MMP10
RNF213
H3-3B
RAD54B
FSBP
ZNF763
TBC1D16
ETV4
PES1
TCN2
CELSR3
NFE2
ARHGAP42
ETFB
CCDC124
MAP3K12
AKIRIN1
QPRT
PMEPA1
KCNN2
KMT2B
CYTH2
ACCS
IL23A
BCL9
ESRP1
KCNIP4
SASH1
SMIM14
SLC16A13
ESRRA
WDR33
KNTC1
ARF4
GSN
ZSCAN2
SLC33A1
BORCS6
ZNF506
PDCL
RASAL2
TJP2
PLCH1
ZNF474
YPEL3
C1orf167
KDM2A
ARHGEF19
PLA2G3
AASDH
EGR3
MOSPD3
SRSF7
PAIP2
CHD9
DPPA4
WDR36
FZD2
ACSL1
ZNF101
ARMC3
ITPRIP
CCDC92
SMAD3
ST6GAL1
CNKSR3
ACTR1A
SUFU
TMCC1
DGLUCY
CDH10
SLC25A11
RNF167
GCNT2
ZNF202
NOTCH1
RIF1
GOLGB1
PSME3IP1
RSPRY1
PTGS1
RNF19A
BFSP1
NDST1
ARID2
RPL27
SPRY4
WASF1
CDC40
GABARAP
COX8A
TSGA10IP
AUH
TRDMT1
CDON
ADAR
PDIA4
MSANTD4
SCOC
ST18
INTS9
HMBOX1
TTF2
CAPRIN1
ZNF35
UQCRQ
GDF9
ZNF532
ARIH1
ZBTB45
MCM10
LOC107986453
ETV6
PBXIP1
TES
KDM3A
SYT12
PCDHB8
DUSP12
SAXO1
RRAGA
RGS3
GSPT2
ZNF3
IFTAP
OR51H1
SH3GL3
TRPM3
ESR1
RCAN3
SHF
SLC25A36
RSPH14
VMP1
PTRH2
RTKN
TIAL1
MMACHC
CCDC163
SYNPO2
ALPL
FOXP1
ILF2
N4BP2L2
SALL4
TIA1
AMOTL2
MAP3K9
ANAPC15
PIN4
ETFDH
C4orf46
PCYT1B
ZNF180
EIF4E3
SPHK2
TTC39B
MARCKS
DHX8
CCDC167
PWWP2A
TRIM38
WBP1L
CCN2
PALM2AKAP2
SFPQ
ATAT1
VPS35L
GADD45A
ASMTL
VOPP1
ZNF254
EMC9
DHRS3
CNN3
TIMP4
ZSCAN10
HELLS
MYMX
BAZ2A
FOXO6
PTX3
KDELR2
PKNOX2
OGA
PRKRIP1
WBP11
C12orf60
NEMF
MCCC1
ZNF682
VASH2
CALD1
RND1
ZNF737
PANK2
CCL2
WLS
USO1
IP6K2
TMEM33
ITFG2
RERE
POLB
MYO18A
NAT1
C1R
HNRNPUL1
RGSL1
SAPCD1
WNK3
DISP3
SELENOP
ZNF85
SHROOM3
HNRNPC
DDA1
ANP32B
DGKB
SLC25A18
PTCD2
MRPS27
HMGN1
ZCCHC14
EFCAB8
ZNF486
RAB4B
ERICH6B
CAMTA1
TSNAXIP1
RANBP10
PQBP1
TIMM17B
SNAPC3
EIF3F
GGPS1
ARID4B
PACSIN3
FAM185A
CCNB1IP1
FAM13A
INSYN2B
ZMAT2
CDHR3
BAMBI
TMEM114
CFAP20
CDK16
CBR4
LOC390877
GTF2F1
HSPA13
SLX4IP
SPEF1
OSR2
ERGIC2
BTBD3
VCP
PEX5L
POU2F1
WTAP
SOD2
PUM1
TMEM237
PTPRZ1
DACT3
TP53AIP1
KIAA0895L
PAG1
ZNF43
DISP1
TMUB2
USP54
ACYP2
PSME4
ZNF677
ZNF627
PER2
BLOC1S4
ZNF561
KATNAL2
NONO
ABLIM1
LCK
ENOX2
LIMCH1
ZCCHC12
CCDC77
MACROH2A1
GRIN3A
REC8
TSPAN19
LRRIQ1
SPAG9
KXD1
LRRC23
RGS12
FAM76B
CEP57
OSGEP
APEX1
SUGP2
ARMC6
PGAP2
ISL2
HNRNPDL
ENOPH1
ADNP
ZBTB26
ZNF268
PGAM1
OARD1
NFYA
H4C9
RNASE9
SIX2
SLCO5A1
PPME1
C2CD3
HEXIM2
GTF2H4
PRRC2A
LMBRD1
MRPS30
TCF20
EXOSC2
UBA1
G3BP1
GDF5
CEP250
PEX11G
EMSY
DPP4
ZNF253
SELENOF
HS2ST1
CTTNBP2NL
IPO11
PELI1
KLHL4
CCDC130
GOLPH3L
CEP164
ANKHD1-EIF4EBP3
ANKHD1
SPEG
ZSCAN9
PDE4B
ZBED5
CDC7
ZNF630
FBXL8
ZNF589
VRTN
KLHL5
ZBTB40
TFDP2
PBLD
HNRNPH3
ZSCAN31
APH1A
XPC
LSM3
SHC1
CKS1B
ATAD2
ZNF548
PPP1R12C
ZNF775
SYTL2
SMARCA2
DACH2
CNP
HIP1
FRRS1L
PIAS2
MUSK
FLAD1
ZCCHC8
SPAG4
CLCN5
ITLN2
ZNF91
MED12
ESYT1
MS4A6E
SALL2
SORBS2
ARHGAP27
PACRGL
ZNF8
INKA2
BSDC1
ACSBG1
VPS37A
CNOT7
ZBTB6
TPGS1
FAM120B
ELOVL5
BMPR2
PSMB7
MIDN
MTUS1
CHD6
HSPH1
CDK5R1
COX7B
ALPK3
AHCYL2
NFIA
INAVA
RSF1
AAMDC
PCDHB13
CLIC1
DNAH2
TCTEX1D4
BTBD19
C1RL
GPR55
HNRNPL
SLC25A25
ZBED3
RABAC1
CEP41
ZNF469
PPP1R15A
SPART
SLFN12
PIK3R3
ORAI3
FTL
ZIK1
MRPL42
NUP62
IL4I1
ATF5
PCDHA11
MAP2K5
MCTS1
RBM22
THBS2
TREX1
CCDC152
OLFML3
ZNF611
CSRNP2
STRADA
OSBPL1A
SPATA12
USP53
ZNF358
CCDC146
TPCN1
IQCD
CIAO2A
MAPK14
PAXBP1
GJC1
TSPAN14
NUDT4B
E2F7
REEP6
PCSK4
EHD4
MAT2B
GPC6
ZNF285
HS6ST2
VEZT
FGD6
GALNT8
ZNF273
ILF3
TCAIM
BCL11B
STK32C
LRRC27
ADRM1
DNAJC12
ZNF675
JAG1
C11orf58
DUSP7
IGBP1
DELE1
IQCH
AAGAB
ZSWIM4
KLF17
CRISPLD1
ZNF92
RPA2
EPHA2
PHOX2B
SLC2A4
GBA
ZNF720
TENM2
NARF
DDX59
PRKRA
PJVK
TUT1
TBC1D31
TBC1D10B
MYLPF
PTPN12
ZNF668
NAIF1
PIP4P1
WDFY2
DPP3
ZBTB8OS
RBBP4
DPPA2
RPS6KA2
G3BP2
NSUN3
DHFR2
FKBP3
MGST1
VIPAS39
AHSA1
CLDN4
SP2
HES5
CHD8
ADGRA1
YIPF3
POLR1C
SPPL2B
LSM7
CMSS1
PTGFRN
PNN
OIP5
NUSAP1
NPDC1
INPP5K
NSA2
GFM2
GRHL2
CLPB
RBM23
PRRX1
NRL
DCAF11
TOM1L2
DRC3
ZNF681
SELENBP1
NUP160
SPTBN1
PRMT1
ZNF493
TENT5B
CLEC3A
PRRC2B
UBQLN4
LAMTOR2
CDK12
RABGAP1L
TMX2
MED19
PALLD
TCF4
CCNG2
YWHAG
GALM
PLTP
AP1S1
H3C1
PAX6
NR2E1
SLCO4C1
OLIG3
CCDC171
L3MBTL4
SDHD
PCBP2
C1orf100
PIMREG
IFT27
ARSD
ZNF66
KLHL24
FAM220A
FXR1
PLEKHG1
TRMT2A
RANBP1
SP5
NCLN
ATOH1
ZFP64
RABL3
GTF2E1
ACTL6B
TXLNG
IFRD2
ADAMTSL1
SERPINB3
PSKH1
TMPRSS3
C7orf65
EEF1A1
WNT5B
ZNF140
DNM2
C6orf132
NDUFB4
PHF12
CSRNP3
SERPINH1
EPHB6
DPAGT1
MEX3B
NFKBIL1
ATP6V1G2
NASP
AFAP1
LOC389199
FRMD4A
DDX3X
PNRC1
RBBP9
NR2F1
ADD2
TTI2
RNF26
ANKRD28
CSNK1A1
TSNAX
CLCF1
NSMCE4A
KCNN3
NGDN
MED17
EMC4
EP300
MPND
GSK3A
TM9SF4
FAM221A
WDTC1
TNNT1
SEC63
ZNF343
TBC1D17
AKT1S1
SP1
NUDCD2
HMMR
PSMB6
AMACR
MTMR4
UBXN4
TAS2R7
CHN2
RRBP1
APC2
TRIM54
ZNF724
LRRC34
AMOT
ATF6B
WDR86
CAPNS1
EPB41L1
HBP1
PRTFDC1
ANK3
KNL1
NF2
HDGFL2
H2AX
TMBIM6
ZMAT1
IL1A
RBBP6
LCOR
HACL1
BTD
FEM1A
METTL9
CABYR
UBALD2
ELP5
CTDNEP1
CDX4
PAX9
WDR74
KHSRP
GDPD2
DMD
SLC39A9
ERH
H4C15
H4C14
MEF2C
UBR2
CACYBP
RPS6KB2
TPP2
CLIC6
ARID5A
SET
TNFRSF21
POLR3E
UBOX5
FASTKD5
TMEM91
B9D2
BAG6
TLCD3B
PACS2
STOX2
FEZ2
ZNF738
NDUFA2
IK
DCLK1
ATF7IP
TRIOBP
ZNF100
DPYSL2
LMO4
SLX1B
SLX1A
BOLA2B
BOLA2
KAT7
POLR3A
RFFL
COPS7A
CD300LB
ZNF430
TP53BP1
HMG20B
JADE1
SENP8
MYO9A
GLIPR1L2
CCDC30
SUMO2
HYI
MDK
SIRT4
ERV3-1-ZNF117
ERV3-1
GBF1
GATB
NUDT2
KIF24
PAM
ZBTB11
ACTR3
MED24
INTS4
ZNF714
ZNF433
VPS52
RPS18
MAGED1
XAB2
FGF19
SYNGR4
FXR2
ARL14EP
NKAIN4
TNRC6B
SHBG
NDUFA5
RAD21
PCDHA10
PAIP1
TMCC2
CENPV
RBAK-RBAKDN
RBAK
GRAMD2B
PGLS
RFPL3
ING4
CCDC174
EIF3E
MAPK10
WBP1
KIAA0319
RND3
AFF3
LTBP4
ZNF106
UCHL5
RO60
AKIRIN2
FBXO16
C1orf94
STAG3
GPC2
NEK2
RHOJ
POC1A
NSRP1
TNNT2
RAD23B
ABHD2
DKKL1
ACAA1
FH
MAD2L1BP
GTPBP2
OXA1L
FABP7
C1GALT1
H4C3
TMF1
CLK4
AP2S1
DUS3L
SRA1
SLC13A4
ACTR2
EVI5
UQCRC2
NEDD9
THEM4
WDPCP
CALCRL
MDH1
NFYC
HSP90B1
ABCF2
WDR89
HDAC11
SLC7A11
MRPL3
KBTBD6
ANKRD36B
RDH11
KRTAP13-3
BSND
VENTX
IGFBP2
CITED2
ZNF277
DOCK4
EXOSC5
BCKDHA
GCDH
FNDC11
RNF122
S100A4
H2AC16
SNX15
TRAPPC6A
BLOC1S3
ADK
AP3M1
FLYWCH2
NBR1
SLC39A14
ZNF586
H2BC5
EVC
KCNA1
ADAMTS16
CALR3
C19orf44
ZNF292
NODAL
PRCC
CIC
PAK2
MAP9
UBP1
ZNF587B
GAL3ST4
ADAMTS10
GABRG2
NKIRAS1
RPL15
RAB34
PHLDB2