ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
PTMA
FAM227A
CBY1
CELF3
MTF2
NOTCH1
ARID2
NDUFB5
MRPL47
FUZ
ZSCAN2
GGH
GRK6
PIPOX
IQCH
AAGAB
TJP2
HMGB1
SLC12A7
IFRD1
SH3GL3
SNAPC3
PLEKHG1
SLCO5A1
CLEC9A
TLX3
DDX17
C2CD4D
TARS3
PLPP2
HGS
ARL16
ETV1
TMCC1
TES
ARIH1
H3C6
HOXA9
WFDC10B
KMT2B
H3-3B
PHF5A
ACO2
UGT1A5
KRTAP3-1
FBXL19
ZNF775
PPFIBP1
CCPG1
C15orf65
GLI2
NUP160
SINHCAF
H4C15
H4C14
RTBDN
YEATS2
NARF
NADK
ESRRA
MARCKS
PRDX1
C3orf20
HDAC9
WFDC8
MSANTD4
SYNE2
KDM2A
ARHGAP24
MAD2L1BP
GTPBP2
ZFC3H1
THAP2
CCT2
AUH
SLC33A1
KRT23
NRCAM
ESRP1
PLK2
SEPTIN9
C6orf132
GOLPH3L
KDM3A
CFL1
ZNF428
RFX5
MAP3K9
NDUFS5
PPME1
C2CD3
BORCS6
SPRY4
SLC20A2
ZNF195
HMGN1
ZNF687
EGFLAM
POLB
SIX2
KCNN2
HOXB9
CDH18
CAV2
SH2B2
LRP1B
IL31RA
LTBP1
NDE1
PI4KB
UBTD2
PLCH1
ZBTB6
TRIB1
ZBTB45
LTK
CLCF1
PDP1
ZNF84
DUSP12
KNTC1
PDIK1L
CYTH2
EIF4EBP1
RSF1
AAMDC
ZFP69B
PGK1
OAZ2
PSMB7
DCSTAMP
TIAL1
GOLGB1
DPP3
ST6GAL1
SYBU
SCNM1
LYSMD1
SLC25A36
ACTR2
FGF1
SRGAP1
ETV4
TRAK2
STRADB
RPS11
PIF1
CPVL
CDK5R1
GADD45G
F11R
SNX27
SNRPN
CAPRIN1
DST
TMEM132A
TMEM211
PIK3R3
LIMCH1
ZNF106
ARNT
FNBP1L
CUEDC1
IGF1
SNTB2
PDIA4
SC5D
STX6
ZNF304
SPATA12
HACL1
BTD
KANSL1L
ZBTB40
ANAPC15
PCDHB8
TLN2
JUP
CEP63
ANAPC13
MANSC1
ZNF736
TNRC18
TRMT2A
RANBP1
MRO
SEMA6C
ITPRIP
ETV6
CNIH4
PTPRO
KLF7
DLX5
TMPRSS4
TCF12
FGF3
CITED2
MCCC1
SLC25A11
RNF167
SDHD
RAET1L
GSN
VANGL2
EMSY
PMEPA1
CHMP4C
ANKRD65
RAI14
RPA3
ICOS
POC1A
TIA1
PIMREG
VGF
FMN1
ST7
ZNF184
CHD6
CEP164
CACHD1
TWIST2
SH3D19
BBS7
FGF18
EIF4A2
UBOX5
FASTKD5
EMP1
KCNH8
ZDHHC5
RPL27
ZNF292
ANP32E
H2AC19
H2AC18
FAM83A
VASH2
HCN4
ARID5A
HSPB3
SYNCRIP
ADRM1
RRBP1
MCM7
AP4M1
SST
KLHL24
SPHK1
AFAP1
LOC389199
LDB1
CHN2
MFSD6
ST8SIA1
WASF1
CDC40
LNX1
PPP1R2
PTGES2
RASAL2
NDUFS8
MINDY1
PLEKHJ1
ZNF346
PIN4
SFPQ
FILIP1L
SMC4
IFT80
LMO4
ZNF680
MYPN
CTTNBP2NL
RABGAP1L
PER2
ZNF608
PCBP1
OGA
AKAP9
TCF4
IP6K2
TBC1D31
CPSF4L
LY6G6D
MRPL42
PBXIP1
CHML
THEMIS
CSRNP2
G3BP1
NSA2
GFM2
SPRING1
RNFT2
EYA1
ZSCAN9
INSM1
LPP
HEBP2
INTS9
HMBOX1
OR13C2
MAPK14
PHF14
GFOD1
FOXO6
CNP
ZNF268
SLC3A2
SLC7A11
VPS50
HEPACAM2
DMRTA2
PIP4K2C
KNL1
GPER1
IRF4
NEBL
RTRAF
APH1A
MTHFD1
SLC45A4
TMUB2
HSD3B1
CNKSR3
TAX1BP3
EMC6
RIC8B
SOX6
ERMN
CCDC88A
C11orf58
CTH
ERV3-1-ZNF117
ERV3-1
ICE1
ST3GAL4
SACS
ZBTB10
RHBDL2
RAB30
SYTL2
DDX41
WBP1L
ZFAND3
KIAA0895L
SAPCD2
METTL9
RHOBTB2
GPSM3
ALDH3A1
HBP1
RNF122
SRSF7
ZNF277
DOCK4
CDK5RAP2
SEMA6A
UFD1
CDC45
EIF3F
MAB21L4
H2AZ2
PHF3
TUBG1
RETREG3
TADA1
UBQLN4
LAMTOR2
CEP170
SDCCAG8
SENP8
MYO9A
GOLIM4
BNIP2
EP300
PELI1
CCAR1
RPS6KA2
GAL3ST4
CADPS
ZSCAN31
SH3PXD2A
TOMM40
PRCC
CLDN22
MCC
NXPE2
WDR74
SHF
CD2BP2
RPL23A
WDFY2
EMC9
MYO1B
MPND
OR4C6
VEZT
FGD6
MOSPD3
COX8A
GORASP2
HSPA13
NKIRAS1
OARD1
NFYA
TMEM60
PHTF2
ZBED5
TTC23L
TSPAN13
MEGF9
INTS4
UBALD2
C2orf73
NME7
BLZF1
RDH5
ZBTB8OS
RBBP4
FBRS
PAFAH2
ZNF8
ASCL4
CDC14B
ATL1
CIART
CYTH1
NBPF11
DEDD
EEF1A1
GTF2H4
EEF1AKNMT
HNRNPA0
LSM10
MEA1
KLHDC3
SNRPC
ZNF708
NBPF12
FEM1A
NFYC
ASPM
PNRC1
BAZ2A
PCNP
RAPGEFL1
MAT1A
MIA3
TIMM10
HILPDA
SLCO1A2
RFFL
CKAP5
WBP2
OR2AE1
REST
METTL11B
DNMBP
NRG1
SRRM4
OBI1
PRICKLE1
FLAD1
MED12
HESX1
TDGF1
VENTX
PSMD9
HPD
ZNF343
FGD4
CER1
IER5L
DNMT3B
DAGLB
CNPY1
MTRNR2L8
LIN28B
NANOG
FBP1
PPP1R16B
MTRNR2L2
RIF1
GIMAP5
KIFBP
FBXO40
FZD2
BFSP1
CCDC169-SOHLH2
CCDC169
LRRTM3
PDPN
USP44
CEP41
ZNF532
SPIC
FGFR2
PDCL
TUBB
DHX32
DGLUCY
SLC2A14
GDF3
RFX4
LRRTM4
SFRP2
TIMP4
ADA2
DDX3X
CARHSP1
FOXP1
GET3
SASH1
AK4
CAMTA1
WDR49
AHCYL2
TNC
FAM120B
TBC1D16
NDST1
ACVR1
UGT1A6
C20orf96
MACROH2A1
WNT5B
ALDH7A1
ANK2
ST18
PXMP4
SLC7A5
AASDH
SGMS2
VOPP1
PITPNM2
OSBPL1A
DPPA4
SLFN12
CCDC92
CCN2
DICER1
PRRC2B
DISP3
WDR36
SLC16A13
TESK2
GCNT2
CDH10
CFLAR
CFAP20
EPB41L1
BRINP2
PALM2AKAP2
STMN1
ADAMTS16
KLF5
DACT3
F11
HSPH1
CELSR3
CNGA1
CTNND2
RGS3
DHX8
KCNIP4
TACC2
ACSL1
LINGO1
HES5
ZNF202
MBOAT2
HOXB1
GADD45A
CP
ISL2
C22orf39
SMAD3
TRDMT1
CD200
LLGL1
GEMIN7
LIN28A
TUT1
DCLK1
ARHGAP42
YLPM1
PPP1R18
FAM153B
CCL2
ZNF140
SLC10A2
NEDD9
RNF213
TCHP
CNR2
CAAP1
SP5
SNX16
RAD54B
PLAGL1
ZFYVE1
ZNF627
SET
FAM181A
ZSWIM4
MEF2C
ETFB
ITGB1
STK32C
LRRC27
KRT8
IFIT3
DHRS3
LYPD1
ERGIC2
EGR3
CCDC167
TMEFF1
PES1
PCYT1B
HEXIM2
THEM4
SAXO1
RRAGA
PWWP2A
AKIRIN1
IL17RD
ACCS
RNF19A
ATAT1
TRPM3
E2F7
POLDIP3
MDK
C1R
HNRNPDL
FSBP
C1orf127
ZNF318
ADAR
TSNAXIP1
RANBP10
JAG1
HLTF
IL23A
ENOPH1
SMIM14
ZNF37A
TCN2
IPO11
DTNA
ARF4
FAT1
ABCB8
GXYLT2
CNN3
ZCCHC12
GSPT2
SYNPO2
LPCAT4
TRIM22
ZNF358
YWHAQ
RBBP6
AFF1
ACTR1A
JPT1
SLC2A11
SPAG9
ZNF469
RGPD2
RGPD1
PCDHB5
SPAG4
PDE4D
STOX2
LCOR
RNF43
EXOC5
AP5M1
ADNP
ESR1
GDF5
CEP250
NFE2
WBP11
C12orf60
MMACHC
CCDC163
TSGA10IP
UQCRQ
GDF9
SPHK2
ABAT
GALNT8
ZNF763
AMOTL2
GFRA1
HIP1R
TNFRSF21
PSME3IP1
INKA2
ID1
CDK12
DLG2
SLCO4C1
PKNOX2
KLHL4
POLR3E
SIRT4
TMPRSS7
MMP10
RSPH14
RSPRY1
ERBB2
CALD1
CCDC130
TFDP2
PRM3
SCOC
ZNF254
ASMTL
RASSF8
ZNF649
PTCD2
MRPS27
ZCCHC8
ZCCHC14
STAG3
GPC2
METTL7A
RIMBP2
SMARCB1
SOX5
NASP
MAP2K5
PCDHGC4
PBLD
HNRNPH3
TINAGL1
RCOR1
PCDHB13
PAIP2
BLOC1S4
ARHGEF37
DERA
SUCLA2
GRHL2
PTGS1
PYDC5
IFI16
EGFR
KLHL5
KLF17
IREB2
ELOVL5
ZNF506
TLE3
DPPA2
PRR5L
DNM1L
TBC1D17
AKT1S1
PROM1
TUT7
DDX5
ATAD2
DNM2
RIMKLB
ZBTB18
BCL9
CCNG2
ZBTB26
RBMX
PAG1
HNRNPUL1
YWHAG
PDE4B
G3BP2
CCDC146
TTF2
FAM220A
KIF21A
RPL15
IFTAP
MS4A12
HEXIM1
COPS7A
RAP1A
MIDN
POU2F1
USP53
TSPAN19
LRRIQ1
SLC2A4
BTBD3
ZNF180
SHROOM3
NUFIP2
PACRGL
ZNF250
RAB34
PWWP3A
CHD8
BCAT1
CDH6
RBBP9
CHMP7
RAB4B
PAXBP1
CALR3
C19orf44
KMT5C
SMARCA2
PHLDB2
MRPS30
HNRNPC
FZD1
EIF1AX
ADGRA1
SALL2
RGS12
RAPGEF5
FAM76B
CEP57
H4C9
MAP1B
MRGPRX3
PTX3
TMX2
MED19
UBR2
HES6
IPO4
SERPINB6
GBA
TBC1D10B
OLIG3
MYLPF
PEX11G
PLEKHA5
KIAA1522
PGM2L1
MAST4
NUP214
ETFDH
C4orf46
ZSCAN10
OGT
IGFBP2
YIPF3
POLR1C
CYP4F11
KCNMB2
TSTD2
NCBP1
ARHGEF19
ZNF474
ACSBG2
GAS2L3
DDX31
TPCN1
IQCD
RPUSD4
FAM118B
PBX1
CRISPLD1
XAB2
DPP4
GID4
ATPAF2
FMNL3
MTUS1
ZNF3
ZNF101
MEIG1
PQBP1
TIMM17B
NELFCD
VAPB
TCF20
TAL1
SLAIN1
KXD1
KCTD6
ITGB8
IFT27
BTG1
CCL26
GRIN3A
SLC4A2
NR2F1
CDK5
ANKRD6
MCTS1
EXOSC2
FAM102A
CLIP1
RNF44
LIFR
SLC35G4
TCF7L2
FGF19
ZNF273
PPP1R15A
RBP1
MMRN1
RFX1
IGSF9
RND1
SRPRA
HNRNPL
FOXN3
PLEKHG2
PTPRZ1
CHMP4B
CCDC171
TBC1D9
NEMF
LYSMD3
USP54
CDK16
PRTFDC1
SEL1L
GPBP1
MAP2
NLGN1
QPRT
BPNT2
ZNF335
CPA5
CD300LB
ZNF593
C1orf232
STAU2
GRAMD2B
NDUFS7
CCDC172
BSDC1
ILF2
RGSL1
CBX1
PRDM14
BMPR2
SCNN1A
ZBTB20
PRKRIP1
KMT5A
ZNF85
ZSCAN12
ABCB4
SPEM1
CLPB
ADD2
RBPJ
ZNF576
IRGQ
RAB5C
HIP1
TTC39B
DOCK9
NCOA4
APPL2
ZHX3
PTPN12
ZIK1
SPTBN1
LMAN2L
DDX20
OXNAD1
DPH3
NTMT1
NODAL
ZSCAN18
WTAP
SOD2
SLC4A7
UBE2T
SUFU
PTPRD
TOMM40L
TGIF1
ERICH6B
SMC3
MTDH
WDR33
DSE
CIAO2A
ABLIM1
TSPYL4
LRRC23
NEK2
INSYN2B
ZBTB38
REEP6
PCSK4
LDAH