ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144543 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◣ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

OSGIN1
LGR6
UBE4A
WDR74
MTRNR2L1
MUC3A
PMF1-BGLAP
PMF1
TNK2
GSDMD
GP6
DUX4
RAG1
TRAF6
PPP1R18
CPXM1
TRIM48
LOXL2
FABP6
UCN3
MAMDC2
NME1
MEF2C
INKA1
TBKBP1
C3
FMNL1
TMC6
TMC8
BMS1
CRYAA2
CRYAA
ZNF718
ZNF595
LEPROTL1
AUNIP
DRC7
TOR1AIP2
TOR1AIP1
NFRKB
TACO1
TMEM275
HNF4A
NUF2
NINJ2
SUN2
ARHGAP25
CTRC
DPY19L4
PRRC2B
RPS6KA1
CSF1R
CYB561
SPAAR
OLIG1
CLIP3
NKX6-3
KCNK9
CACNG4
KLF2
FAM107B
MRPS18C
HELQ
LYL1
TMEM104
NAT9
TNFRSF1A
VAV1
CCDC149
NIBAN3
OLFML2A
MTRNR2L8
RNF166
MAPK6
CSK
ACY3
ZNF792
CLEC4E
TMIGD2
FSD1
SMIM33
NDUFS3
KBTBD4
NFE2L2
DUSP7
EVPL
GTF3C3
B4GALT7
PRAM1
ADA2
BCL3
WDR11
GNAI2
RNASET2
TLCD5
FCMR
NBEAL2
CSRP1
INAFM1
RNF220
CENPI
STX16
FRA10AC1
TEFM
SMG8
NEK6
SKIV2L
NELFE
MADCAM1
RAB37
ZNF221
ADAP1
SIGLEC5
KISS1
NDUFS7
TRIM41
SLC39A3
LIME1
CYTH4
CNPY3
PSD4
WNT7B
CLEC5A
WDR97
MAF1
SAMD11
SIPA1
STAB1
GPAA1
EXOSC4
ACBD5
RMDN1
AHDC1
LMO2
SLC24A1
PHC2
OPRL1
RGS19
GSX2
COL23A1
LYRM1
DCUN1D3
MYO1G
TGM5
EXT1
NTMT1
CBFA2T3
DCAF10
RASAL3
CLEC11A
SHANK1
POTEJ
SH3BP2
ZNF391
POTEH
SSBP1
ARPC3
RHOF
POPDC3
GFM2
STXBP4
COX11
GREB1L
TMEM72
MUC6
TOP3B
PITPNM2
UNC13D
AK1
C17orf75
ZDHHC6
VTI1A
LPIN1
ABT1
DGKZ
HBEGF
PRRG2
NOSIP
PSD
FBXL15
SHANK3
SBK2
ANKRD40
LINGO1
WNT10B
RASGRF2
S100A9
KLHL20
GRPEL2
MMEL1
GTF2H2
ZNF408
ARHGAP1
CDK9
ARL6IP4
FGGY
SH2D3C
GTF2H3
EIF2B1
TFAP2E
PPIAL4C
PPIAL4A
H4C14
LIMS1
GOLGA3
MRPL30
MITD1
GSN
TRIP4
C8orf58
CCAR2
THUMPD3
BTBD19
TCTEX1D4
WDR36
USP3
GRK2
SIRT4
IL16
RORC
IKBKE
FBXO11
LAPTM5
LRCH1
NPEPL1
CCDC77
KDM5A
CA12
MTMR9
RXRA
CRH
PYCR3
CD33
HEMK1
C3orf18
NR1H2
EMID1
ATP12A
ARAP3
CCN4
GNG14
NABP1
EMILIN1
ITGA4
CELF2
OR4K2
KBTBD2
BID
ELMO1
TXLNB
IPO4
CCM2
HHEX
ING4
NOXA1
TEAD3
TSPOAP1
PPP6R2
FOXI1
ERLIN2
PPIP5K2
CACNB1
PADI4
IREB2
RARA
LTB
LST1
STX1A
TBXA2R
EDC4
SEC14L1
ADAM10
NEDD9
ARHGDIB
SERPINB9
MPO
SNRPB
DUS1L
CARMIL1
RUNX1
RNASE2
NUP54
SLC44A1
TUT1
RASGRF1
ADRM1
DGCR6L
FASLG
LSG1
UBE2J1
RAB24
PRELID1
ZNF276
VPS9D1
MYO18A
IFIT3
TP53I11
IL17RE
C1QTNF4
CDK5RAP1
UTP3
EIF1AD
BANF1
PPP1R35
RAB3IL1
P2RX1
SYN2
TATDN3
NSL1
DMAP1
UBXN8
KIAA0513
RGS14
KCNN4
SLC18A3
CHAT
ZBTB45
ZNF565
SCAMP2
FURIN
AURKAIP1
FAM207A
TARS2
NT5C2
MN1
MMRN1
CLTC
PSMF1
PHB2
PEX12
RMND1
ARMT1
ZNF165
SNUPN
STXBP5
SUCNR1
SIGLEC9
HPN
LAMP1
MTRNR2L2
MSH3
DHFR
SEPTIN9
ANAPC5
CCL3L3
CCL3L1
GMCL2
PVALEF
AATK
GPX4
MGAT4A
PTGR1
MRPL40
HIRA
NDST2
ANKRD13D
MNAT1
GNG2
NR2F1
FGF7
SDE2
ARSG
SLC16A6
LILRA2
ACOT11
DCP1A
C10orf88
WDR55
PIGV
AKNA
CSNK1G2
ADORA2A
PSCA
SIRPB2
LHX6
LSM4
LMBR1
RCSD1
STAP1
MFNG
GTF2H2C_2
GTF2H2C
TSNAX
FBXW7
MC1R
ARAP1
HPCAL1
CD300A
AGRN
INTS12
GSTCD
SLC16A3
CD82
PLEC
PLEKHO1
SLC22A16
FCER1G
CD7
TUBGCP3
TMA16
PROSER1
NHLRC3
NFE2
ASS1
SEC14L5
LY86
CRHR2
TTLL8
LINC01638
BAZ1A
PPIAL4F
PPIAL4E
PPIAL4D
ALG10
GRB2
ARHGAP30
COLGALT1
FLI1
CSF3R
CNPY1
NFKB2
DCAF12
MMP9
ANPEP
CXCL2
S1PR4
MAP1LC3B2
TCIM
CFAP410
RGL2
RAG2
IFTAP
ALG10B
PALD1
TMIE
ALS2CL
PTPN6
C12orf57
KLF5
PPP1R15B
MRPL1
SLC26A11
SLC39A4
CPSF1
RPS14
GLRX
IPCEF1
GYPC
PRLH
FARSA
CALR
CYREN
FERMT3
SIGLEC15
SH3TC1
TM6SF1
TFF3
ETV6
TNFSF9
TSPAN10
NPLOC4
TRAF3IP3
PLEKHN1
ZNF384
BBS1
PDLIM2
C3orf86
CPTP
MREG
COL8A2
CAMP
SELENBP1
TAS1R3
ATP6V1G2
NFKBIL1
GALK2
COPS2
TMEM154
TNFSF8
HDC
AIF1
PRRC2A
COX16
CRACR2A
GIMAP1-GIMAP5
GIMAP1
RUVBL1
ITGB3BP
EFCAB7
TRIB1
RASSF2
TTYH2
ST3GAL1
SELENOH
TSFM
MLXIP
TMPRSS9
TSSC4
RPS7
PCNX3
MAP3K11
TBX2
DUSP6
ZFHX3
NAPRT
OSM
MROH6
ARHGEF18
PPIL3
NIF3L1
ARHGEF2
CXCL1
SLC43A3
AZU1
PLPPR3
PLD1
NFKBID
HCST
PXK
LKAAEAR1
TYROBP
ARHGAP45
DUSP22
RAC2
KCNQ5
IPPK
MYL12A
SYNJ2
RPL29
AGK
PPP1R16B
LPCAT1
CLDN19
MRPL21
IGHMBP2
SELENON
MRPS16
NDUFC2-KCTD14
NDUFC2
PODNL1
BMF
MAPKAPK3
IFITM10
DR1
TM7SF3
BPI
TAGAP
ATG16L2
TNFAIP8L2-SCNM1
TNFAIP8L2
NR1H3
ACP2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DDX23
MTF2
IFRD2
H3-3B
HEXIM2
KMT5B
CCNL1
CTNNB1
RNF151
ZC3H6
FEM1A
TBL3
FRG2C
DSTYK
UNK
PDE6D
COPS7B
CDCA3
EIF2D
CALR3
C19orf44
TMEM41A
STX18
BRWD1
TIMM21
FBXO15
UBC
NCBP2AS2
NCBP2
ABCF2-H2BE1
ABCF2
ATAD2
NOTCH2
PPP5D1
CALM3
TSNAXIP1
RANBP10
PPRC1
CHPF2
PAFAH2
GSPT1
POLR2J3
TMEM11
SOD2
HMGB1
WTAP
TMEM199
POLDIP2
WDR53
FBXO45
TMEM222
SPATC1L
CALM1
GATB
FOXJ3
CLPB
OPA1
SSNA1
ANAPC2
RBL1
CCDC88A
TSN
TOMM22
SPNS1
CALM2
SEC13
MRM3
LRP6
GLOD4
CYCS
ZSCAN22
MRTO4
EMC1
SCGB1C2
SCGB1C1
ORMDL3
TCF3
RPL8
COPS8
KBTBD7
NMNAT1
LZIC
TIMM22
UBB
NUP214
KMT2D
SMN2
SMN1
ZNF34
BTRC
CNOT1
PEMT
TMEM115
MED23
DOHH
SLC39A1
C16orf91
POMZP3
ZNF337
SCAF1
RRAS
KPNB1
SYMPK
FOXA3
CHMP4B
ST3GAL2
CTDP1
RPS3
MTERF4
BOD1
AP2S1
IST1
WASHC2C
GSTA4
PSMD3
PEX3
ADAT2
TOB2
PRCC
PNKD
UBE2B
CDKL3
RPS20
AHCYL2
AAMP
SNX17
EIF2B4
ING3
PHIP
TSC1
GFI1B
TCEA2
CRTC2
HTRA2
DQX1
PA2G4
CLEC16A
DEXI
ADPGK
CKS2
HEXA
ZNF212
WASHC2A
SMPD3
PEX26
NAGPA
THRAP3
KCTD9
CDCA2
DDIT4
USP30
MRPL24
KBTBD6
RPL22
ZFAND2A
NUDCD1
TTC13
ARV1
TRIAP1
ZCCHC4
UBE2D3
PPP1R12B
ZKSCAN2
MED15
ZNF721
PIGG
NXF1
PKM
PARL
ATP5MF-PTCD1
ATP5MF
MCM7
AP4M1
RPS6KB2
RPL18A
RPS28
NDUFA7
ATG14
OSCAR
NDUFA3
OAZ3
USPL1
SLC9A1
H2BC21
H2AC21
H2AC20
MAD2L1BP
SCNM1
LYSMD1
INVS
ERP44
IPO11
TMEM127
CIAO1
KCTD5
MICOS13
HSD11B1L
SCRIB
C8orf33
RPIA
PANK4
HES5
CDC25C
ZNF444
GTPBP2
NPRL2
CYB561D2
WDPCP
NOP14
MDH1
GRK4
FUS
GPAM
MAIP1
PPP1R12C
DNAJC11
RPS26
EIF4A2
DIP2A
DUS2
DDX28
FAM53C
PHB
TMTC3
CEP290
TRAPPC3
ZW10
TMEM79
SMG5
CYP51A1
TNFAIP1
IFT20
BRIX1
SLC35B4
MAPKAPK5
RANGAP1
ATXN2L
UBR2
ALKBH3
MXD4
RBM42
C1orf159
SRSF11
ZC3H10
RPL41
ADNP
UBQLN1
LRRC29
MRPS15
TBRG4
NUP153
PCID2
CUL4A
ZNF56
BANP
RLF
PGBD4
EMC7
KAT7
CHD2
PEX14
DFFA
COMMD1
PINX1
MFN2
INTS9
HMBOX1
BOD1L1
C19orf53
PSMD11
FBXW11
MRPS35
WBP1
INO80B
CCT4
KDM4B
DNAJA3
UBE2Q1
NKIRAS1
SLC25A19
DCAKD
UBQLN4
LAMTOR2
NSFL1C
TAF5
HMGCL
GHITM
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZFYVE1
TRIP12
FBXO36
PBLD
HNRNPH3
GID4
ATPAF2
CCDC146
MMACHC
SPRYD4
LRRC40
TMEM70
ELOC
STK25
DPP9
VPS37A
CNOT7
RIC8B
LUC7L
AP2M1
NOC4L
DDX51
NMT1
TTC33
DOLPP1
ENDOV
RPL15
PHF23
GABARAP
CIC
SPTLC1
SP2
MRPL20
SLC33A1
ARHGEF12
ZNF420
MDM4
ZGPAT
ARFRP1
PIGU
ZFYVE19
DNAJC17
AHCTF1
HNRNPAB
ACOX3
NTAN1
COMMD9
FBF1
UCHL5
RO60
TEPSIN
NDUFAF8
TCF12
MRPL58
CSRNP2
EIF3F
RCL1
IDH3B
LETM1
CANT1
RBM6
MTMR2
BIRC5
DNAJB12
STAU1
ABRAXAS2
GDE1
CCP110
PHF12
LONP1
CATSPERD
SECISBP2
SUFU
ACTR1A
TFPT
PRPF31
ARF4
RALBP1
TRMT44
SUPV3L1
SNAPC3
HSPA5
SMARCAL1
H2BC5
H1-4
GTF3C5
HSP90AB1
GFUS
HSP90B1
DDX1
SART1
COQ9
CIAPIN1
ZSWIM8
CHCHD1
RPL12
LRSAM1
ZFPL1
CDCA5
UBL7
H2AX
DDX49
COPE
GTF2I
PHF13
RCOR1
SNRNP70
DNM1L
FDPS
JOSD2
ASPDH
PIK3R3
GTF2H4
CTU1
ARHGAP9
COG2
ZNF749
DCAF8
RAB5C
MRPL39
TSC2
NTHL1
WASHC5
NSMCE2
SNX1
CIAO2A
GABPB1
DESI2
TMEM262
BOLA1
DCAF1
U2AF1L5
U2AF1
TRAF7
WAPL
MARS1
TMEM59
TCEANC2
NDUFV1
CAND1
IP6K2
CBWD5
TNFRSF12A
THOC6
HCFC1R1
PNRC1
TRAK2
STRADB
CHCHD3
RWDD1
CRBN
SOX6
C11orf58
ODF3L2
B3GALNT2