ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
MAMDC2
RLF
ZNF684
IPPK
ZMPSTE24
MTMR9
CAP1
EXO5
CD33
C8orf58
CCAR2
SCNM1
LYSMD1
ITGB2
GRPEL2
ZFP69B
SH3BP2
RPS19
GLRX
ALOX5AP
LAMP1
SPATC1
NFYC
NLRP12
CAB39
NCF1
CD1C
IL1B
TEAD3
NDUFS2
ADAMTS4
WDR74
RXRA
LGALS8
RAB24
PRELID1
TLE3
FCER1G
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PGK1
PGA4
GPBAR1
PNP
CSF1R
PGA3
WDFY3
CEBPD
MTF2
ZNF408
ARHGAP1
ZFP69
NCF2
HBS1L
SETDB1
PPT1
YES1
ADGB
MTPN
LUZP6
FLI1
CD244
FAF1
URM1
VPS33B
RNF149
TP53I11
ATP5MPL
TLE4
STEAP4
SMAP2
PGA5
SNRNP200
CMIP
PPP1R12C
ARHGEF12
FRG2
XRCC5
POMP
ARHGAP30
ZNF227
SUN1
MMACHC
MFSD2A
VCPIP1
C8orf44-SGK3
TIGD4
ARFIP1
IL7R
STK36
RNF25
APPL2
RUBCNL
EXOSC3
MDM4
MEFV
FCAMR
NUF2
RUNX1
FOXJ3
UXS1
CEACAM21
ITGAM
TMEM30A
TRIT1
IPCEF1
MRPS18C
HELQ
CCDC200
SREK1IP1
CWC27
PISD
VTA1
NMBR
DUSP7
TRPV4
MMP9
TTC14
FEM1A
CLIC5
RAB3IL1
MRPL24
ABT1
SASS6
CITED4
PRR5
CARD8
PPIH
PPIAL4F
PPIAL4E
PPIAL4D
SPDYE13
MSH6
SP110
NIBAN3
MIA3
KIFAP3
RASA1
MXD3
MED23
C4orf3
MED18
OAS3
IL16
HAUS6
TEP1
LCP2
OAS2
PDCD2
RNPEP
SELENOH
MTRNR2L2
MSH3
DHFR
SEMA4C
FAM207A
TEKT2
ADPRS
ARPC2
MED10
UNC45B
TRIM41
CD1A
PIKFYVE
GOLGA7
DOCK8
ZNF780A
ROPN1L
UBL7
NIP7
COG8
KLF2
FCGR2B
USF1
KBTBD7
OTUD7B
UBXN8
TNFAIP8L2-SCNM1
TNFAIP8L2
TSSC4
SCAF11
SLC12A6
RHEX
NOP10
NUTM1
NCSTN
COPA
COL9A2
SIGLEC11
TCF12
UBR7
GON7
CBWD5
CBWD3
CBWD6
RPL37A
ZNF56
BRIX1
ARID2
UCHL5
RO60
CD53
MTRNR2L8
INPP4B
C22orf34
ELOF1
B3GALNT2
TLR4
EPRS1
IFNGR1
UTP3
STK4
NECAP2
IL1RN
INAVA
ERMARD
MAP2K1
HIBCH
TMEM154
CHMP4B
GTPBP10
SDCCAG8
CEP170
DUX4
C6orf89
CCDC149
FAM227B
DTWD1
EXT1
PIGM
SERPINB13
TMEM39A
DBI
C2orf76
RMDN1
IFRD2
KBTBD6
TNFAIP1
IFT20
MPZ
EIF2D
ZNF484
ARPC3
TFB2M
CNST
RMND1
ARMT1
DCAF10
CXCL1
TUBA8
PGBD4
EMC7
METTL18
C1orf112
TMEM53
ARMH1
KCNK6
ZNF622
RASSF5
DAP
DEFA4
ARHGEF1
GPR68
RPL37
PA2G4
WDR70
SUSD6
FASLG
ZNF658
SCAMP2
ATP2B4
CTSG
INTS9
HMBOX1
AP1B1
PDLIM2
ADGRE1
ZNF410
DENND4B
NDFIP2
HIGD2B
BBS4
XRN2
TIPRL
RAPGEF1
UBAP1
NR3C1
CMTR1
MEF2C
TCTEX1D1
CCND3
TRIAP1
CHCHD5
RGL1
ARPC5
ZP3
FRG2C
THYN1
ACAD8
MTMR14
TATDN3
NSL1
LRFN3
TBPL1
GPAA1
EXOSC4
MAPKAPK2
APOL6
MARCO
FBXO38
IPP
LILRA2
SKP2
LMBRD2
ALDOA
COL8A2
NUDCD1
ZNF226
MAP1S
HMGB1
USPL1
TMEM59
TCEANC2
SNAPC3
AOPEP
HK3
ZNF718
ZNF595
STAU1
S100A8
ITGA4
EIF3D
TPRKB
CFAP298-TCP10L
CFAP298
SLC22A16
MS4A3
NOTCH2
DISC1
NOL11
CPNE5
ADAM10
SNRPC
PPIAL4H
PPIAL4G
TOMM20
MIDEAS
RGS12
LILRB4
PHIP
GALK2
COPS2
HARS2
HARS1
LRRC29
TOR1AIP2
TOR1AIP1
ERLIN2
KCTD5
TAF11
ANKS1A
SRSF11
LRRC40
MRPS23
ATG16L1
TMEM104
NAT9
TLE1
RNGTT
SDHAF3
PDF
FUCA1
AK2
SDHAF2
CPSF7
FCRL4
ALG10
NME7
BLZF1
IL6R
TBRG4
PRRG2
NOSIP
NSUN5
C1orf198
TPM3
CUL7
TLE6
PTK2B
TRIM35
VIRMA
LRRC46
DPY19L3
CYB5R1
EIF2B3
TMIGD3
ADORA3
FCAR
PPP4R3A
PRPF3
ISY1-RAB43
ISY1
SNX3
THOC5
PKN2
DNAJC10
KIF2C
MAGEF1
EXOC3L1
E2F4
USP3
SMARCA4
PLEC
PRAM1
TRIP4
GGPS1
ARID4B
FKBP1A
FAM200B
TACC1
FIGNL2
IRAK1BP1
RTF2
CCL22
SCAF1
RRAS
TPT1
LYPLA2
TBL3
TMEM33
TPK1
JOSD2
ASPDH
WDR61
LMO2
IKBKE
NDUFS3
KBTBD4
NCOA3
MOB4
DR1
PDPR
ZNF197
SAMHD1
TTC13
ARV1
SNAPC5
KLHL20
LTB
LST1
OSCAR
NDUFA3
BOD1L1
RTCA
XRRA1
SPCS2
GADD45B
SRP9
MRPL3
ZNF614
VPS25
PHB
BOLA1
TATDN1
NDUFB9
MFSD10
GHRL
MTRNR2L1
SNX19
SLC8A1
PEX3
ADAT2
ZC3H3
DDX18
MTERF1
CAVIN2
RPS20
NAT10
CMPK2
NUS1
INTS12
GSTCD
ERI1
NUP133
MAP3K7CL
MYBL1
CCT8
ZNF668
ZNF646
SLC35F6
PTTG1IP
SCML1
FBXO28
ATG5
MAML2
FBF1
GPANK1
CSNK2B
LY6G5B
LAMTOR5
SEC31A
NDUFA12
P3H1
TOR1A
PPIL4
WASHC5
NSMCE2
HEATR1
ASXL2
CERS2
ANXA9
MICOS13
HSD11B1L
TMEM43
CHCHD4
TMX3
CCDC102B
NCF4
BID
DNAJC5B
MRPS35
RAB1A
FCGRT
ZNF398
HSPA13
ZNF425
TRIP11
DUSP6
LRRFIP1
TBC1D8B
TMEM222
ZFYVE1
GTF2H2
GNA15
RAB44
CHMP7
PHACTR4
ZNF221
ZNF142
BCS1L
PPIE
DHDDS
ZNF350
ORMDL3
CBWD1
BIN2
SUCNR1
RGS18
ARHGAP18
GTF2H3
EIF2B1
ZNF224
PEX12
TRAPPC8
PRKCSH
CCDC151
AKR1A1
MYL5
PHC2
ATP5ME
DECR1
FPR1
TMEM127
CIAO1
SLC35B4
MMUT
CENPQ
PIGF
CRIPT
AOAH
A2M
H3-3B
UNK
ABRAXAS2
GTF2H2C_2
GTF2H2C
SCAND1
SNUPN
WDR55
MFSD4B
RCSD1
TRIM25
CHMP5
BAG1
PSMD3
TAGAP
RPIA
ALG10B
UBE4A
RNF139
MAPKBP1
RPAP3
MTIF2
TAF1B
UBAP2L
C1orf43
RBM45
PDE11A
LMBR1
AHI1
SF3B1
TIMM10
TCHP
MINDY3
CBFA2T3
RWDD1
SRPRA
NR1D1
BAZ1A
STK25
CCDC86
PPP1R8
RPL5
SRFBP1
HMOX1
RAB27B
WNT2B
S100A9
ABCF2-H2BE1
ABCF2
RAD50
GNPAT
C1orf131
IBA57
WIPF2
COX7A2
MAD2L1BP
GTPBP2
PSMD7
PDSS2
CEACAM4
WBP1
INO80B
ATG7
EPN1
LARS2
SPG11
MRPS14
FAM120B
TMEM121B
CD5L
NTAN1
SYK
CSF2RB
EDEM3
CIITA
TNFSF10
SYMPK
FOXA3
PPP6C
DUS3L
CHMP1B
TERF2
TNPO1
ARL4A
MS4A7
TMTC3
CEP290
SEMA4B
PARP10
GRINA
RPS6KB2
PTPN4
PPME1
C2CD3
KIZ
CAPG
TLN1
CREB3
PUM1
ZNF697
VPS26C
MDN1
CLK2
SLC24A1
SNAP47
JMJD4
COX5B
CCDC182
TIMM21
FBXO15
CLPP
LATS1
SLC30A5
DCP1A
SESN1
TPR
ODR4
CEP57L1
WDR7
NCKAP1L
THEM4
ICAM1
GIMAP6
ZNF337
PRCC
MAGOH
GET4
RPL38
CDCA8
C1orf109
ATP6V1C1
TBC1D23
CCDC30
ZMYND12
PPCS
KPNA5
OTUD6B
NKIRAS1
RPL15
ZNF225
ATP6V1G2
NFKBIL1
YTHDF2
C1orf74
SUCLA2
CYB5B
RASA3
IL10RB
ERCC6L2
ZNF3
COX6A1
TMEM115
WDR43
TOMM40
ADAR
PHLPP1
PIGBOS1
PIGB
DBN1
TIFAB
OR4D9
AGGF1
HLA-DMB
ARID3B
N4BP2L2
LYRM1
DCUN1D3
WDR27
C6orf120
PEX19
NCALD
ACRBP
SDSL
BATF
ZNF444
DMAC1
TAF12
UBLCP1
RAB10
ATP13A2
HAX1
ZNF318
SNX17
EIF2B4
RANBP3
SRSF4
TADA1
TBL2
VSIR
GYPC
PAFAH2
TSN
BOD1
ETNK1
GNAI2
ANXA2R
SLC33A1
RPL27
PICALM
CLASP1
NMNAT1
LZIC
ZNF212
AHCTF1
FRG1
SECISBP2L
MUC3A
CTNNB1
ZNF547
TRAPPC2B
WASF1
CDC40
DCLRE1B
AP4B1
MLKL
CALHM6
ADSS2
RNF14
TMEM39B
MTHFD2L
COX16
MPEG1
DESI2
PLPBP
NUP58
RAC2
BCL2A1
ETFDH
C4orf46
SRBD1
GRAP2
RIC8B
TRAK2
STRADB
MCPH1
CYP4V2
KIAA0513
ACSL1
DAPP1
VKORC1
RRM1
NOXA1
NUDT16
RARA
TCTEX1D2
TIRAP
TNFRSF1B
GPR137
RPS12
GUK1
RAPGEF2
GIMAP8
FRA10AC1
TMEM70
ELOC
NUP42
NFE2L2
DNAJC16
CASP9
RAG2
IFTAP
CD48
OR52K1
BRF2
TTLL4
SMIM20
MIER1
DNAI4
RAB43
METTL9
THAP1
SLC25A32
DCAF13
ZNF268
CLEC11A
SHANK1
SOD2
WTAP
RPL29
NDUFAB1
PACC1
THAP12
GVQW3
TMCO1
ZC3HAV1
UBE2D3
SKIV2L
NELFE
CDC37L1
LOC100289561
ABCB10
RCHY1
KIFC1
MYCBP2
TBCE
ABHD3
NGB
PPIAL4C
PPIAL4A
CD274
ADGRG5
HMGCL
SLC7A6OS
PRMT7
RRS1
ADHFE1
DEF6
UBR1
VIPR1
CPNE8
ZW10
SART1
LUC7L2
SMARCD3
SF3B5
MRPL45
RPAP1
RALB
CCT5
ATPSCKMT
ASNSD1
ASDURF
ANKRD33
PHF13
EML6
IPO8
ERO1B
MTMR6
STXBP3
EFHC1
SELPLG
UBR2
MRPS31
ZNF251
WDFY2
LSM2
PPCDC
P2RY6
DEFB1
PTGES
ZNF148
INTS1
DHX8
CCZ1B
SGO2
IRF2BP2
SLC30A7
EXTL2
CPT2
SP140L
LAMB3
GNB2
C1orf54
APH1A
EEF1AKNMT
PLSCR1
PEX2
SEC22B
CRYZL2P-SEC16B
SLC18A2
IL19
IL10
PINX1
SLC30A6
TRPM2
TNFSF14
CCL26
SIGLECL1
RPL22
RALBP1
CDK5RAP2
THAP11
NUTF2
CENPT
CLN5
CCDC15
ENPP4
SIGLEC6
NDUFV1
SPHK2
RPL18
FAM83E
SPRED2
PATL1
ADA2
ZNF749
MRPL55
TEX46
KDM1A
RNF141
TRIM37
DET1
TMCO6
NEDD9
RABGGTB
OSBPL7
HCK
CCNL1
CFAP20
TRA2B
YARS1
S100PBP
TMEM101
PPP1R15B
RFC2
SLC16A3
NKAIN1
PPP1R12B
RBM34
NBR1
ZNF879
EIF3E
CC2D1B
RUFY3
TRMT11
ADGRL2
TRIM69
ATP5MF-PTCD1
ATP5MF
SERPINI1
PDCD10
AP2B1
PCYT1A
TRAPPC4
RPS25
RTN3
RPS3