ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
MAMDC2
RLF
C8orf58
CCAR2
ZNF684
IPPK
EXO5
ZMPSTE24
CD33
CAP1
ZFP69B
SCNM1
LYSMD1
GRPEL2
MTMR9
LAMP1
ALOX5AP
SH3BP2
CD1C
CAB39
GLRX
ITGB2
TEAD3
RPS19
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDFY3
CSF1R
LGALS8
NFYC
NLRP12
ITGAM
RXRA
NCF2
SUN1
NCF1
PNP
STEAP4
RAB3IL1
PGA3
NDUFS2
ADAMTS4
WDR74
SNRNP200
S100A8
IL1B
RAB24
PRELID1
TLE3
FAF1
PGK1
VTA1
NMBR
SPATC1
ZFP69
PPT1
TSSC4
HAUS6
IL7R
HBS1L
CD244
ABT1
GPBAR1
MTF2
FRG2C
ARHGAP30
EXOSC3
SETDB1
PGA5
MRPS18C
HELQ
CITED4
TRIT1
SP110
IPCEF1
RMND1
ARMT1
CEBPD
FCER1G
FLI1
RASA1
EXT1
SLC12A6
NOP10
NUTM1
CMIP
PGA4
TP53I11
MRPL24
TMEM154
ARPC3
PPIH
COL9A2
SNAPC3
FRG2
CCDC200
IL16
RMDN1
DUSP7
PDLIM2
SASS6
FCGR2B
ZNF408
ARHGAP1
IFRD2
FCAMR
NUF2
RNF149
NDFIP2
MTPN
LUZP6
CCND3
PRR5
SPDYE13
MMP9
POMP
UBR7
GON7
MFSD2A
RNPEP
VCPIP1
C8orf44-SGK3
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
CMTR1
HIBCH
FAM207A
MIA3
ARPC2
ZNF718
ZNF595
TLE4
SMAP2
NIP7
COG8
SRSF11
LRRC40
RASSF5
SLC25A32
DCAF13
DISC1
GPR68
ATP5MPL
RPL37
FOXJ3
ZNF410
HEATR1
RAPGEF1
MMACHC
CBWD5
CBWD3
DUX4
MSH6
RUNX1
FEM1A
TIGD4
ARFIP1
VPS33B
PPIAL4F
PPIAL4E
PPIAL4D
PPP1R12C
RWDD1
PTK2B
TRIM35
CEACAM21
ATG5
UBAP2L
C1orf43
EIF2D
STK4
UBAP1
EIF3D
SORBS3
URM1
YES1
TFB2M
CNST
CUL7
MAP2K1
SUSD6
EPRS1
KHDRBS1
ZP3
SELENOH
MEFV
ZNF484
ADGRE1
NIBAN3
ANKRD33
INTS9
HMBOX1
DNAJC10
ADGB
DCP1A
CHMP4B
RUBCNL
OAS3
MRPS31
TTC14
UBXN8
TNFAIP8L2-SCNM1
TNFAIP8L2
TMEM59
TCEANC2
RTF2
MOB4
TMEM30A
USF1
UCHL5
RO60
DOCK8
HMGB1
USPL1
TNFAIP1
IFT20
TIPRL
FCRL4
TMEM127
CIAO1
ARID2
TOMM20
WDR55
MAP1S
SERPINB13
DGAT1
WDR70
TGFBR2
CPNE5
TIMM21
FBXO15
MDM4
PEX12
PISD
MED18
ZNF197
MXD3
CCL26
DCAF10
GTF2H2
LTB
LST1
TPRKB
GPAA1
EXOSC4
XRCC5
SIGLECL1
FPR1
ATP6V1C1
RGS12
DMRT2
UXS1
TAGAP
TTC13
ARV1
SIGLEC11
RPL8
HARS2
HARS1
INPP4B
WDPCP
MDH1
MTRNR2L8
STK36
RNF25
KIFAP3
UTP3
ZNF696
CLIC5
MYBL1
NOTCH2
NECAP2
TMEM104
NAT9
IFNGR1
INAVA
LCP2
KBTBD6
ARHGEF1
CD1A
C4orf3
RGL1
ARPC5
CXCL1
SIGLEC9
OSCAR
NDUFA3
SCAF11
RNF151
TBL3
C6orf89
NOXA1
CCL2
ACTRT3
ATP6V1G2
NFKBIL1
RTCA
SLC33A1
TEKT2
ADPRS
PRPF3
TLE6
PDCD2
SCAMP2
AGTRAP
CTSG
MAP3K7CL
CCT8
TMEM53
ARMH1
ZNF267
IKBKE
RCHY1
UBLCP1
VPS25
NDUFS3
KBTBD4
GCLC
TCF12
EIF2B3
P3H1
FCAR
MIDEAS
AOPEP
MTRNR2L2
MSH3
DHFR
SNX19
NOL11
DR1
RNF141
MRPS23
LRFN3
ASXL2
ZNF622
ZNF227
RRS1
ADHFE1
EMILIN1
FKBP1A
PKD2L2
OSM
ATG16L1
PIGM
NSUN5
AKR1A1
WNT2B
FUCA1
RAC2
PEX3
ADAT2
PPP1R12B
CBWD6
CBWD1
HAX1
MTRNR2L1
MFSD10
ZFYVE1
SDHAF3
FBF1
N4BP2L2
ROPN1L
CCL17
MARCO
SCAF1
RRAS
ACAD9
PSMD7
OTUD7B
SDCCAG8
CEP170
APPL2
TADA1
SF3B1
TRPV4
ARHGEF12
CHCHD5
GOLGA7
TRIP4
B3GALNT2
TPK1
EXOC3L1
E2F4
GOLGA5
CLDN19
CALHM6
SLC35B4
WDR61
AGGF1
TMEM186
PMM2
GOSR1
DENND4B
TCTEX1D1
PIGU
PIKFYVE
ADGRG5
STAU1
FAM120B
SLC24A1
TAF11
ANKS1A
PDPR
CSF2RB
LRRC46
C1orf74
TATDN1
NDUFB9
PHACTR4
RALB
CCNL1
FBXO46
CEP350
MEIOSIN
THAP12
GVQW3
UCK1
ZNF780A
SNX3
GSPT1
ZNF56
ZNF142
BCS1L
ACVRL1
OPA1
ZNF337
IBA57
PIGBOS1
PIGB
PA2G4
TERF2
IPO8
THOC3
GALK2
NFX1
COPS2
PRKAB1
SNRPC
CAPG
XRN2
TOR4A
NOB1
NME7
BLZF1
LOC100289561
TLE1
ZNF331
FCGRT
SRGAP2B
SRGAP2C
A2M
FAM227B
DTWD1
TBPL1
FITM2
STARD6
C18orf54
RPS6KA1
THOC5
CSRP1
ARHGAP25
CLPP
PACC1
RPL27
TAF12
SLC22A16
GTPBP10
NR1D1
KBTBD7
SRSF4
MTMR14
KLF2
FASLG
BRIX1
DUSP6
ITGAL
PHB
UBL7
DESI2
RAD50
ATP5PO
PICALM
DNAJC16
CASP9
AP1B1
MAN1B1
PRKCD
S100A2
PLEC
SEMA4C
MRPL17
HDDC2
WIPF2
PHC2
RPL37A
YKT6
CARD19
HK3
SYMPK
FOXA3
HSPA13
KATNBL1
GET4
CFAP298-TCP10L
CFAP298
IRAK1BP1
SUCNR1
LILRA2
PGBD4
EMC7
JOSD2
ASPDH
RANBP3
TPM3
NOL6
INTS1
UBR1
ELOF1
C22orf34
CIAO3
EML6
AP2B1
ZNF668
ZNF646
DYNC2H1
ADAMTSL4
TSN
TOR1AIP2
TOR1AIP1
CCDC149
SLC39A1
CRTC2
DBI
C2orf76
PDF
NAPG
PPCDC
NLRP3
DAP
GNAI2
MED10
TBL2
SLC18A1
TPT1
CXXC1
LAMTOR5
TAF13
RAB1A
HUS1
RRM1
NUP58
CCDC30
ZMYND12
PPCS
AHCTF1
SLC31A1
FKBP15
GLI4
SSNA1
ANAPC2
TRIM41
TLN1
CREB3
WDFY2
SPG11
MRFAP1
NCSTN
COPA
ORMDL3
LYPLAL1
C1orf54
APH1A
TOMM6
GUK1
COPB1
ZNF697
OAS2
UNC45B
OCSTAMP
CALR3
C19orf44
TMEM39A
VPS26C
NR3C1
NUP133
ANXA2R
RNF181
BOLA1
SF3A3
RPS16
RGPD1
RGPD2
SLC37A4
ADORA1
TBC1D23
PUM1
GOPC
ADAM10
NFAM1
KCTD5
EMP3
ADSS2
MDN1
SF3B5
CCDC114
RNF14
ACP3
CCL22
TMX1
TUBA8
GTF2B
MEF2C
IGSF10
RPIA
ZW10
BOD1L1
GTF2H2C_2
GTF2H2C
ZFP64
SIGLEC6
CEACAM4
ATG7
ERMARD
PES1
ZCWPW2
AZI2
MPZ
MTFR1
TCN2
ZNF614
PPME1
C2CD3
KIAA0513
MRPS35
RPL5
SEMA4B
MLKL
VCPKMT
C1orf198
PARVB
NKAIN1
RPL29
LMBR1
PPP2CB
ROGDI
BID
IL1RN
SMIM22
SNX17
EIF2B4
OBI1
MAPKAPK2
BOD1
TRAPPC4
RPS25
ADAM17
CERS2
ANXA9
CNOT1
NUP155
RHEX
SEC14L1
TRMT11
KCNK6
SYNE3
CHN2
CTU1
MRPL55
MTMR6
ADAP1
RSL24D1
LAPTM5
SART1
SH2B1
TUFM
SNAPC5
PUM3
ETNK1
GNPAT
C1orf131
SLC1A5
SYNGAP1
CUTA
DNAH14
IL6R
GIMAP8
COPS8
MED23
XRRA1
SPCS2
SRP9
SKP2
LMBRD2
CHMP7
CSNK1A1
USP3
FIGNL2
CTDP1
CLEC16A
DEXI
SRPRA
DECR1
CATSPERE
CTNNB1
RPL36
SLC35F6
RPL22
NUDCD1
SNAP47
JMJD4
MED4
ZNF350
GZF1
ABCA3
C1orf100
CCDC146
DHDDS
KIF15
KIAA1143
LAMTOR1
OCIAD1
ZNF221
CHMP5
BAG1
RAB44
ZC3H6
ZNF175
RPS20
LTN1
UBE2V1
TNNI2
USP15
DCPS
VIT
MRPL44
RPL11
TRIM37
EMC8
COX4I1
CCL4L2
NKIRAS1
RPL15
DDX41
RC3H2
TRIP11
EEF1AKNMT
RARA
EIF6
BIN2
RASA3
RIC8B
MEN1
RNF216
HIGD2B
BBS4
GTF2E2
STON2
VIRMA
PNPLA6
GGPS1
ARID4B
LRRC29
KIAA1586
NDUFC1
NAA15
ZNF12
ZNF318
SYK
TRIAP1
GRK6
ABCD3
CTTN
EFHC1
PTK6
PCBP2
PRRG2
NOSIP
SPINT1
CD53
SMARCD3
CRBN
IPO13
LTA4H
ORC5
AHI1
S100A9
EDEM3
SLC44A1
LATS1
ZNF397
PPP1R11
YWHAB
PPIAL4H
PSMA6
INPP5D
CGAS
PPIAL4C
PPIAL4A
LILRB4
ZNF567
RPL38
ZNF354B
UTP23
CTR9
TRIM25
NBR1
TESK1
TLR4
FRG1
MAGEF1
LYNX1-SLURP2
LYNX1
THEMIS2
NCKAP1L
TRIM55
PPP6C
ARID3B
LONP2
ABCC11
POLN
HAUS3
KIF2C
ATP2B4
CD5L
SEC13
THRAP3
BRF2
INTS12
GSTCD
ZNF230
GHRL
MCOLN1
EED
CNPY3
SMIM26
TOMM7
YTHDF1
CYB5R1
DAB2
APOL2
FAM185A
ZNHIT2
MRPL49
FAU
ZNF354C
NSMCE3
ESRP2
WDR36
ST7L
CAPZA1
AGT
MAD2L1BP
GTPBP2
ERI1
TAF1B
SGO2
NDUFAF6
TSPAN16
NCF4
GRK2
NCBP2AS2
NCBP2
SSBP1
DUS3L
VKORC1
SPRTN
EXOC8
LIN54
POM121
TCHP
OAF
IFITM2
DDX23
RPS7
SKIV2L
NELFE
ZNF549
ABCB10
RNF139
SAMD4B
ZC3HAV1
COX7A2
AP3B1
LMO2
AVIL
ZNF212
GBA
SNU13
PTTG1IP
LILRA1
ZNF225
CNIH4
ERLIN2
DNTTIP2
BHLHE40
KATNA1
SRBD1
TNK2
OAS1
RRP15
GABPA
ATP5PF
MRPL45
FAM200B
TRIM46
KRTCAP2
ICAM1
SLA
UFL1
TBP
PSMB1
TRMT61B
FBXO28
PKN2
KLHL20
ZNF658
GNAI3
DHX15
TNFSF10
HMGCL
TPR
ODR4
MAK16
SLC30A7
EXTL2
SHPRH
TMTC3
CEP290
ZNF189
MRPL50
MRPL16
CDK19
AMD1
MTERF1
ZBTB22
DAXX
CDC42
C2CD5
PROS1
NAPB
CEP63
ANAPC13
NPRL3
DNAJC5B
RPL6
LTO1
DEDD
PPIP5K2
TCTEX1D2
TMED4
TRAF3IP3
OSBPL7
TM6SF1
TOMM22
ZNF721
PIGG
UBE2Q1
NDUFAB1
ZC3H11A
ZBED6
PPIL4
SUCO
ALG10B
EXOSC6
TNPO1
PSMD9
HPD
STAT2
APOF
LYPLA2
FAM32A
TMEM125
SIGLEC7
TMEM222
PPP1R8
UNC50
COA5
CHEK1
MED20
BYSL
SYT11
GON4L
TEP1
TMIGD3
ADORA3
NDUFV1
ALG10
WFDC3
DNTTIP1
MUC3A
WDFY1
WDR27
C6orf120
ITGB1BP1
CPSF3