ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9730733 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◣ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
UBC
PABPC4
H1-3
TRIT1
H4C3
H1-6
EXO5
SRSF3
YBX1
AIF1
PRRC2A
SZT2
MED8
ZFP69
SIRT4
H4C6
CTPS1
SVBP
ERMAP
H4C14
H4C15
ZMPSTE24
RLF
H3C13
H2BC18
PARP2
NFYC
H4C11
CCDC30
ZMYND12
PPCS
PPIE
SLC3A2
C6orf226
CITED4
H1-2
TMEM107
SRSF7
EIF4A1
SMAP2
ATP6V1G2
NFKBIL1
DDX39B
CDC20
HSP90AB1
H4C4
H2BC6
CIRBP
H4C12
EEF1A1
ZNF684
H4C1
H3C1
H1-1
H2BC21
H2AC21
H2AC20
H3C2
H2AC4
H4C2
COL9A2
KLF7
ZNF669
RPS27
RAB13
RPLP0
IBA57
ATF4
RPL10A
HEXIM2
ZBTB4
SLC35G6
POLR2A
P4HB
INO80D
H2BC4
H2AC6
NASP
PPP1R10
MRPS18B
NCL
SELENOT
TP53BP2
PEX6
PPP2R5D
MAT2A
MLLT11
CDC42SE1
AGPAT2
RPS8
H2BC12
H2AC12
KCTD18
RPL5
MFSD2A
GABPB2
SNX19
DESI2
H2BC8
H2AC8
H3C7
H2BC9
H4C7
MCL1
RPS6
H3C3
H2BC3
EIF1
MARCHF7
NLRX1
H2BC5
H1-4
SRP9
RPL12
LRSAM1
P3H1
SCMH1
ACTRT3
PPIA
HMGA1
FASN
S100A13
CHTOP
ZNF124
RFX3
DDX5
CEP95
PCIF1
PABPC1
PUF60
MAD2L1BP
ID1
SRSF2
MFSD11
C2orf69
POLDIP3
ST3GAL3
TUBB4B
NDUFAF3
DALRD3
HMGN2
LEMD2
H3C8
H2BC10
FOXJ3
HNRNPAB
RPL10
KHDC4
ZC3H10
RPL41
GBA
SMARCA4
ATAD2
ZC3H4
HSD17B8
RING1
ZNF572
HNRNPH1
MIA3
RPS3
PDCD6
RPL18A
SFPQ
CYC1
DNAJB4
FUS
EIF3L
ANKRD54
OARD1
NFYA
ARF1
DCAF12
SRF
QSER1
RPS20
ELOB
GPX1
BZW1
DDX19B
AARS1
ZFAND3
H2AX
TBCC
BICRAL
H3-3B
UNK
ZNFX1
RNPEP
RBM12B
SF1
E2F3
C19orf48
ZNF691
TRAM2
H1-10
NOP58
EGR1
ZNF7
REEP4
SEPHS2
UHRF2
RELT
ZBTB37
UBAP2L
C1orf43
RBM14-RBM4
RBM14
B3GALT4
VPS52
RPS18
TAF7
SRSF6
RBMX
ZBED4
KCNQ4
GRIN2D
KDELR1
SLC38A2
LOC730098
CCL27
XKR9
LACTB2
PYCR2
AHCTF1
NSD2
MOB1A
EEF2
ZNF672
NFKBIA
RPL30
MDM4
H3C11
H1-5
H4C13
SEC16A
C9orf163
ELAC1
SMURF2
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
H2BC11
H2AC11
H4C9
ELOVL1
DENND6B
KIF5B
RNF151
ERLIN2
NDUFB10
RPS2
RPL13A
DNLZ
FARSA
CALR
C6orf62
LAPTM5
RPS10-NUDT3
RPS10
CEBPA
PNP
RNF224
CYSRT1
RNF208
SLC39A7
RXRB
RCC1
TAF15
MRPL2
KLC4
DENND4B
H4C8
NSMAF
ANKMY1
DUSP28
HYI
MTF2
CRK
RNF220
NAE1
FBXO28
CPT2
GPANK1
CSNK2B
C6orf47
LY6G5B
APOM
BAG6
ZC3H6
ACBD6
PKMYT1
PBLD
HNRNPH3
PPP1CC
ZNF253
RPS3A
RBM12
CPNE1
ZNF670
CFD
TUBB
MDC1
MATR3
CHAMP1
SLC16A3
ZFP69B
ZNF627
H3-2
SREBF1
TSPAN10
NPLOC4
TOR4A
ZNF326
SLC25A44
PPP3CC
HNRNPC
H3-3A
C8G
FBXW5
KATNBL1
MYH9
HNRNPA2B1
CBX3
POLR2D
TAOK1
MAP10
H2BS1
TMEM69
GPBP1L1
PSKH1
GTF2IRD2
GTF2IRD2B
EIF4A2
TUBA1B
TRA2B
CLTA
RDX
ZNF451
GET3
EIF3A
RPS19
RPL7A
MED22
DGUOK
TNRC6B
GADD45GIP1
YWHAH
TOMM6
RPL11
SUMO2
ZNF623
ZBTB22
RPL32
CC2D1B
LY6G6F-LY6G6D
LY6G6F
ABHD16A
LAT
TAPBP
NARF
LAMTOR1
OXLD1
CCDC137
CUL7
RPL8
ZNF34
H3C15
H3C14
H2AC19
H2AC18
SMIM19
SLC20A2
PPIH
RPLP1
JTB
SLC39A10
KNTC1
VARS1
TSPOAP1
TMEM79
SMG5
PAIP1
ZNF24
DNPH1
METTL21A
RPL3
HSPA9
C1orf53
SUMO3
ADPGK
MAN2C1
MOB4
HNRNPUL1
NCOA5
BBC3
ZFP36
PLEKHG2
SNAP47
JMJD4
CLK1
PTMA
ZFR
CCNL1
LIN9
FOXP1
HENMT1
UBE2L3
TRIM27
EPN1
CDK12
HYLS1
PFN1
ENO3
PPT1
PXT1
KCTD20
PSMD8
TARDBP
SDCBP
COQ8A
JUNB
ACTG1
ACTR2
TEX30
PCBP2
DDX50
CANX
RBM8A
SETX
POLR2J3
H2BU1
H2AW
MRPS30
TRERF1
CNPY3
EIF5
SUPT20H
STXBP3
YWHAG
MTO1
VCP
KRAS
NFX1
SIGMAR1
ZBTB44
PSMD14
RPL23A
RAB34
EXOSC3
ZCCHC3
SRSF5
MDP1
CHMP4A
RPL7L1
BOLA2-SMG1P6
RBM39
SUB1
DPYSL2
CAP1
H3C12
H2BC17
H2AC17
NUDT4B
NUDT4
TBL2
ARL6IP4
ID2
DIDO1
GATAD1
CARD8
SRSF1
INTS6
NPM1
PSMB8
DPY19L4
USP42
NDUFV3
USP40
CELF1
PDLIM2
TESMIN
CERS2
KCP
SF3B4
TIMP3
LYPLA1
ZBTB45
CDC37L1
RHBDD3
EWSR1
TRIM28
ZNF92
CMAS
SMDT1
PHETA2
ZC3H3
RAB7A
AZIN1
RBBP6
RPP25
CGAS
MRPS18A
TIA1
PRCC
SLC30A5
INTS2
BOD1L1
MUS81
CFL1
PPIF
ANP32E
TGFBRAP1
CYCS
ZNF594
ITCH
NACA
DEGS1
UHMK1
MYL12A
HMGB2
BMP8B
TPM3
H2AZ1
DNAJB14
MSRA
NDUFV2
AFG3L2
TKTL1
TEX28
MAK16
PPP1R15B
ZNF700
ECHDC2
LYPLAL1
TREX1
SLFN11
HPS6
RPL26
ABTB1
TNKS
ATP5F1A
LDHA
STX10
IER2
PKNOX1
PIKFYVE
USP47
GRB2
NUDT3
EIF2S2
IMP3
FES
KRCC1
BCL7B
DCAF8
SDE2
NUP133
KPNA1
HNRNPA3
POMK
SPPL2A
TOR1AIP2
TOR1AIP1
SNRPD1
GTF2A1
DNAJB1
RCE1
OVCA2
UBR2
SLC25A3
MAPK1
PTBP1
ZNF76
CSNK1A1
SF3A1
CCDC157
CHMP5
BAG1
TMEM70
ELOC
ODF3L2
CSKMT
C11orf98
NNT
RNPS1
GRHPR
KANSL1L
RAB4A
BRWD1
RPS15
LUC7L2
MBD1
ZNF200
PRPF38B
RPL24
H3C10
H2BC13
H2AC13
CTBP1
VDAC2
THEM4
PRPF8
TUSC1
HES6
RPL36AL
MGAT2
EIF3E
EIF4G2
ATP6V1H
DNAH14
PFKL
FMC1-LUC7L2
FMC1
TXNIP
RC3H1
LRIF1
RPLP2
PIDD1
NUCKS1
CLIC3
ZNF93
KMT5B
COX18
VPS72
RPL36
MKLN1
GPSM3
CBFB
DNTTIP2
ETFA
ZNF696
ETFRF1
CFAP94
NEMP2
RBM4
GNAI3
SRSF10
TBRG4
ACSL3
RPL23
GOLPH3
H4C5
MYL6
OAZ1
CEP192
IPPK
UBAP2
NFU1
DDX59
SUSD1
GTF3C3
IL4I1
NUP62
ATF5
CHD1L
PRKAB2
HNRNPDL
ENOPH1
ZNF131
GTF3C6
PPP6R3
ZWILCH
RPL4
FOXD1
CNOT1
RAB5IF
MTCH1
ATP5F1B
TOMM20
DNAJC27
GNAI2
ARHGAP35
COPS6
PRRC2C
CBY3
TRAF7
NCBP3
RABEP2
RNF135
VASP
C6orf89
RBM25
PPIL1
TRIM33
RABL6
UHRF1BP1
ZNF574
RPL37A
SLC38A10
NUDT18
PSPC1
C5orf51
GDI2
RPL22L1
C16orf72
ACTN1
RCC2
UPF1
LRRC24
PSMA7
C8orf82
SLC39A13
FBXO4
RRNAD1
ISG20L2
SCCPDH
NSD1
HNF4G
NELFCD
C9orf64
CTNNB1
RPS16
RC3H2
RPL21
VPS36
CKAP2
AFF4
ZNF207
NUP54
UBE2Z
RAB22A
SUPT3H
YDJC
CCDC116
OSBPL5
PMPCA
ENTR1
RPL13
EZH2
FOXK2
MRPL37
CYB5RL
LZTR1
GTPBP4
CMPK1
VAPA
TPT1
EIF4H
NRROS
TONSL
DOCK2
EIF3D
HDAC4
ATP5F1E
PRRG4
NSF
ZNF518A
RPS15A
DELE1
GPX4
HIF1A
RPL37
RANBP6
MAPK1IP1L
RBMXL1
KYAT3
H2BC15
H2AC15
HSPA4
CAPRIN1
GMEB1
SRPRA
IPP
ANKRD13D
RPP25L
HSPA5
NUP42
UBXN8
TCTA
RHOA
ZFAND5
EIF2D
TNPO1
GUK1
UBE2V2
NAA60
TCF25
LUC7L3
ATP6V0C
STT3B
SETD2
H2AC16
TATDN2
SRCAP
LOC730183
STMN1
DAZAP2
TMEM216
EEF1AKMT1
CFAP410
LSM4
CXXC5
PRKCD
TRIM11
C15orf39
D2HGDH
ZSCAN31
UNKL
ZKSCAN2
KDM3B
NCSTN
COPA
ELANE
KPNA2
NSUN4
RACK1
PSMB10
CTRL
ASH2L
E4F1
ZNF280D
TOB2
CHD2
STARD7
SLTM
UQCC3
LBHD1
SELENOH
CALM2
TEFM
TIGD5
EEF1D
PRPF3
KLF10
KIAA1586
RPL31
TPRN
TMEM203
NDOR1
ADAR
SCAF8
ARHGEF2
INPP5D
STAT1
ETF1
SRD5A1
NSUN2
PTBP3
TMEM249
SLC52A2
FBXL6
ATP6V0B
DPH2
CBX5
HNRNPA1
B4GALT2
RPL14
SLC1A5
SH3GL1
CHAF1A
SMC5
HSPB1
SPI1
RPL6
SON
GART
CYBA
MRC2
POLG
ACAP2
ENOSF1
SART1
BMS1
YY1AP1
DAP3
ETNK1
MMAA
PRDM10
TAF1D
C11orf54
PPA2
PIGL
NCOR1
KAZALD1
CREBZF
DEF6
SET
MCM3
PARN
BFAR
LIG3
LMO4
PRR12
RANGAP1
ZC3H11A
ZBED6
TMBIM4
CAPZA2
BNIP2
ZC3H7B
MTDH
H2BC14
H2AC14
RPSA
RPL27A
LRPAP1
WRAP53
TP53
BTBD1
SLC26A8
MAPK14
CSDE1
ANP32B
GMIP
UBE2J2
ATP5MC2
RRP1B
HSF2BP
TUBA1C
ZNF267
FOSL1
GRK2
TERF2
PNN
TRAPPC6B
SCYL1
PPP6R2
HMGB1
ERAL1
NKIRAS1
RPL15
ERMARD
PAN3
DCPS
SRRT
PRR25
XPO7
PTPN7
ATXN2L
SPHK2
RPL18
FAM83E
RPL17-C18orf32
RPL17
C18orf32
INPP5F
NDUFB4
RPL29
THOC1
TPD52L2
ABHD16B
USF1
SSBP2
COPS3
SUGP2
ARMC6
C2CD5
COX5A
CA2
PTER
CST3
GTF2I
PAK2
DDX19A
IDI1
TRMT1L
SWT1
VPS29
RAD9B
WDR37
YWHAB
H2BC7
PUM2
H3C4
H2AC7
GCFC2
INPPL1
C8orf33
MRPL20
DUSP12
ENSA
BRPF3
CLK2
PDF
NSRP1
UBE2G1
PIEZO1
MRPL55
ACTB
CEP20
RBM33
NSD3
LETM2
DYNC1H1
HSF1
BOP1
HSPA8
PIH1D1
ALDH16A1
RAD23B
POC1A
STAU2
NDEL1
ZNF143
MANBAL
PGAP2