ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327758 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◣ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

IFRD2
DDX23
BOD1
TMEM115
PHB
CALR3
C19orf44
LARS1
GSPT1
TCEA2
AHCYL2
ORMDL3
PNKD
AAMP
SCNM1
LYSMD1
PPP1R12B
MMACHC
CLPB
TMTC3
CEP290
ZNF225
ST3GAL2
CHMP4B
SMPD3
CTU1
ODF3L2
NTAN1
PAFAH2
BTRC
SYMPK
FOXA3
PPRC1
SLC39A1
CRTC2
INVS
ERP44
WDR87
SIPA1L3
KBTBD6
TTC13
ARV1
RPIA
TMEM127
CIAO1
GDE1
CCP110
PANK4
HES5
ZNF189
MRPL50
SNX27
MAD2L1BP
GTPBP2
CLEC16A
DEXI
TRAPPC3
UBAC1
SNX17
EIF2B4
TSNAXIP1
RANBP10
CDCA3
SLC35B4
ATP5F1D
CBARP
MED15
FASTKD1
TNFAIP1
IFT20
GFUS
STAU1
C1orf159
MRPL24
PPP1R12C
ZFYVE1
ATP5PO
PHF12
ZFYVE19
DNAJC17
TTC33
ING3
ZFYVE28
CFAP99
ZNF749
SCRIB
VCPIP1
C8orf44-SGK3
ING4
H3-3B
UNK
C16orf91
TSC2
NTHL1
NUDCD1
STK25
GATB
KBTBD7
FEM1A
TSSC4
ZC3H11A
ZBED6
NPRL2
CYB561D2
COX7C
ZMYND10
AP2M1
TMEM59
TCEANC2
THRAP3
SMARCAL1
TRAK2
STRADB
BANP
SCAF1
RRAS
TIMM21
FBXO15
ABCF2-H2BE1
ABCF2
CHPF2
ZNF444
PHF13
ZNF384
LRRC29
CLP1
UBQLN4
LAMTOR2
WNK1
MICOS13
HSD11B1L
PEMT
CCDC146
RPL8
ZNF34
DESI2
SLC4A2
CDK5
HTRA2
DQX1
BOLA1
CTF1
BCL7C
SIRT2
NFKBIB
PRCC
ZNF56
NOP14
GRK4
NDUFS2
ADAMTS4
GTF2H4
TMEM11
NFXL1
EMILIN1
UBR2
POLR2E
RNF151
TBL3
FBXO46
MEIOSIN
ZNF420
ZNF169
STK17A
PEX26
UFSP2
C4orf47
ZSCAN22
MYLK4
WRNIP1
OSCAR
NDUFA3
RAB1A
ZNF235
DDX49
COPE
TFEB
LETM1
BUB1B
FBXW11
RALBP1
TTBK1
RPGRIP1L
FTO
AP2S1
GPANK1
CSNK2B
C6orf47
LY6G5B
PSMD11
SEPTIN9
RBM6
JOSD2
ASPDH
CHCHD3
SMUG1
CCDC150
ZNF224
C19orf53
SSBP1
ZNF337
THYN1
ACAD8
UBE2Q1
DSTYK
SLC25A19
CNIH4
PEX14
DFFA
TMEM70
ELOC
CAPN15
SEC61A1
DCAKD
NMT1
CLDND1
TMEM43
CHCHD4
DYNC1I2
EMP3
SERPINI1
PDCD10
INTS9
HMBOX1
BICD2
LMNB2
UBL7
FDPS
USP48
TOR1AIP2
TOR1AIP1
PSMD2
B3GALNT2
IGSF8
RAB5C
RANGAP1
TMEM69
GPBP1L1
ZNF32
PANK3
CNOT1
KMT2B
TFPT
PRPF31
SLMAP
ZNF230
FGF11
TMEM102
PTDSS2
CCDC90B
AKIRIN2
PHF23
GABARAP
DVL2
WDR53
FBXO45
ZNF554
ZNF354A
ZNF37A
SEC11C
RALGAPA2
CFAP410
IPPK
WDPCP
MDH1
ARHGAP9
MARS1
DDX47
LTA4H
RABAC1
PIGU
ZNF133
SSR2
ZW10
PA2G4
BUB3
CDK5RAP2
TIMM13
CTDP1
TNFRSF12A
THOC6
HCFC1R1
USP31
WAPL
WBP2
AURKAIP1
FAM185A
SOX6
C11orf58
ZNF419
RPS6KB2
GPT2
PRR14
C19orf67
YPEL3
TBX6
NDUFB5
MRPL47
RIC8B
RPS20
SNX1
CIAO2A
ZNF547
TRAPPC2B
GPKOW
CDCA8
C1orf109
FBXO48
APLF
PNPLA6
RPS26
WBP1
INO80B
EIF2S2
SCAMP4
ADAT3
CCDC174
FHIT
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ZNF350
FAM193A
UTP11
TXNDC9
EIF5B
EXOC4
RPS13
RAD51AP2
KAT7
PSMC4
ZNF277
DOCK4
VPS50
HEPACAM2
CNOT4
TMEM143
SYNGR4
USP35
KCTD21
MXI1
RPS7
NUP153
ZNF527
GID4
ATPAF2
PDE6D
COPS7B
FBXL19
ABCC5
TRABD
UCHL5
RO60
SYPL1
TRAF7
PSMD4
INTS1
ZNF586
SNRPE
LUC7L
ZNF451
RPL18A
SLC17A7
PGBD4
EMC7
SUFU
ACTR1A
ZNF747
ZGPAT
ARFRP1
TMEM101
MGRN1
TRMT1L
SWT1
DEDD
TTC1
XPOT
ZNF862
CLPP
ZNF484
TLE3
VAPA
GUSB
GPAA1
EXOSC4
MED27
MRPL20
TMEM245
CSRNP2
ZNF2
AHCTF1
HSPA13
METTL26
SPHK2
RPL18
FAM83E
PTBP1
MAX
ILF3
ZCCHC4
PHB2
ZCCHC8
VIPAS39
AHSA1
RBL1
SUPT4H1
NCLN
L3MBTL2
MED11
ATP6V1G2
NFKBIL1
QTRT2
CCDC191
ZNF773
BIRC5
SSR3
ZNF548
NCBP2AS2
NCBP2
KATNB1
TMEM186
PMM2
RPS3
PSENEN
LIN37
VPS4B
RAB30
SCAMP3
CRK
SCYL3
PPP6C
LRFN3
CNOT6
LEMD2
PRRG2
NOSIP
METTL3
GINS3
RPL12
LRSAM1
ZNF343
RETSAT
ELMOD3
NKIRAS1
RPL15
COPS8
SLC38A9
UBE2N
TMED9
ZNF599
ASXL1
ADSS2
SDCCAG8
CEP170
ENOX2
PRKCSH
CCDC151
ITPR1
ZNF226
ELP6
FAM149B1
ECD
POLR2J3
DNM1L
ZNF585A
WDR97
MAF1
DCAF1
MUS81
CFL1
POLRMT
CDK9
UBA1
COMMD9
RAB7A
DCP1A
AKAP8
EML6
ZNF567
PSMB4
CAPN10
KBTBD8
DGAT1
GFM1
CWC25
ZMAT5
UQCR10
SF3B2
GAL3ST3
CARS1
ZNF584
DNAJC28
CIAO3
ZNF45
OPA1
CXXC1
FAM222A
ZNF25
GGPS1
ARID4B
CDC25C
FAM53C
TOR2A
WASHC3
TPGS1
TMEM94
NOLC1
TSNAX
ZNF764
FBXO38
COPS7A
COG2
PCM1
SERP1
EIF2A
C12orf43
C1orf54
APH1A
UBA52
ZNF227
ABRAXAS2
RPS3A
HSP90B1
MTR
KHDC4
AQR
NCDN
KIAA0319L
WASF1
CDC40
BET1
CTNNBL1
MORF4L1
CDC34
ZNF17
MED23
SKP2
LMBRD2
IPO13
ACP6
PPP1R7
PASK
IFRD1
DPP9
ZNF416
ZIK1
PGAM1
SLC50A1
DPM3
DOHH
CDK8
TSN
TERF2
CAND1
CEP350
UBE2V1
RAB8B
MRPS16
FAM228B
SUGP1
MAU2
SF3B6
CAPG
SH2D6
TMEM33
CA11
ZNF628
ZBTB7A
EIF3C
EIF3CL
SNAPIN
MEN1
ACLY
PPP1R13L
POLR1G
RAB29
OAZ3
VEZT
FGD6
ZNF140
TRUB1
SKIV2L
NELFE
RWDD1
RPL22
ZNF500
RPP40
RBL2
CUEDC2
ALKBH8
EIF1B
EIF3D
NAPB
TOR1A
MPI
MRPL54
APBA3
PSMB6
TMEM199
POLDIP2
HIRIP3
RPL34
DUS3L
ZC3H10
RPL41
ZNF805
NPL
SMN2
SMN1
CCDC124
HEXIM2
EDEM3
NUMA1
LRTOMT
BOD1L1
RPS19
ZNF304
SF3A3
CHCHD6
DARS2
CENPL
TMEM160
NUF2
B4GALT7
CLINT1
LRRC8A
KYAT1
SLC25A44
CD2BP2
CCAR2
C8orf58
PSMD3
PARK7
SLC37A3
NUDT13
RAB3C
MRGBP
ESCO2
CCDC25
PRPF4
CDC26
TOGARAM1
KLHL28
ZNF155
R3HDM1
ZRANB3
AP2B1
HSCB
CHEK2
ZSWIM9
LIG1
C15orf40
TSACC
CCT3
CCNL1
INTS4
IPO8
MAMSTR
CMPK1
STRN
THAP1
ATP6V0B
DPH2
SDF4
B3GALT6
RNASEH2C
BLOC1S5
BABAM1
TTLL11
SERBP1
NOP53
PSMC3
RPL27
YY1AP1
DAP3
RAB1B
LRPAP1
GPR137
MEA1
TOMM22
UCK1
BDP1
SUPT5H
SENP5
MITF
REXO1
ARPP19
IPO7
ALG10B
ATP5MF-PTCD1
ATP5MF
THAP11
NUTF2
CENPT
RPP30
SASS6
DAZAP1
CANT1
ZNF436
RPL23A
RAB34
PRKCI
RCAN1
SH2B1
TUFM
ZNF268
DMAC1
ABLIM2
ZNF317
PUS3
DDX25
RPS27
RAB13
ZNF286A
ZNF550
ZNF691
ZNF180
FBXL18
NARS1
EMSY
CCDC117
PCP2
XAB2
KLHL24
NICN1
MRPS25
GSK3A
ZNF211
C7orf25
XRRA1
SPCS2
RC3H2
TMEM222
SLC33A1
MYBL1
UBE4A
CILK1
FBXO9
KNSTRN
ZNF513
DNAJB6
WDR18
VRK1
STMN3
RTEL1
CDK19
AMD1
DENND1A
KPTN
JTB
ZNF221
PEX12
NUP205
TSNARE1
VKORC1
NCOA3
COA3
CNTD1
OSBPL11
ZNF446
SAP30
ARMH3
TPR
ODR4
MVB12A
MYL6B
YIPF2
TIMM29
GHITM
ZNF165
NME1
ZNF772
NFATC3
POLR2H
CLCN2
SART1
CPEB3
MARCHF5
KIAA0930
FCSK
TIMM22
SND1
ZNF668
ZNF646
WDTC1
RACGAP1
R3HCC1L
CWC22
NUP214
ZBTB45
USP15
SHLD1
ALG10
NMNAT1
LZIC
FBF1
TMEM230
NAA38
RNASEH2A
PRDX2
TMEM88
CYB5D1
LRRC47
PAOX
FIS1
ZSCAN32
ZNF174
ZDHHC16
EXOSC1
ZNF417
ZNF324B
SHPK
CTNS
CACTIN
NDUFB10
ZNF460
PRPSAP1
DHX30
RPL3L
CDC6
SETDB1
DPM2
TMEM258
FEN1
FAM193B
RAD52
ELOB
SNIP1
DNALI1
TXNL4B
DHX38
REXO2
ZNFX1
TIMMDC1
TPRKB
NDUFS7
ARHGEF1
TMEM214
STX10
IER2
PRAF2
YWHAG
BRIX1
SLC35E1
THAP4
ATG4B
TMEM147
RPL29
LONP1
CATSPERD
PRUNE1
MINDY1
UBE2D1
DYNC2LI1
C16orf86
KDM4D
CWC15
RAB5IF
RPS21
SLC30A6
UBE2J2
YJU2
TTC31
CCDC142
PSMD10
ATG4A
RPL37
CBR4
SNAPC3
PCNP
RANBP1
TRMT2A
POMZP3
TMEM79
SMG5
ATG4C
WIZ
ETFDH
C4orf46
METTL18
C1orf112
KCTD5
PURB
TOE1
MUTYH
UBALD1
PSMA2
AP5S1
MRTO4
EMC1
ZNF776
ZNF565
ZNF146
BRD3
CMTR1
KRBA1
SPEGNB
GMPPA
RDH14
C8orf76
ITSN1
CRYZL1
NDUFAF5
ESF1
TMEM150A
EXO1
ORC4
MBD5
HDGF
TMEM129
TACC3
NR6A1
MAP3K13
CAMLG
CCDC77
CCND3
TAF8
DNAJC14
PPME1
C2CD3
ATE1
PUM3
STMN1
ASH1L
ABT1
TIMM23B
PARG
MTMR9
MFSD13A
GFM2
M6PR
KLRG1
SMIM13
PPP1R11
PDE4DIP
FAM207A
ZNF684
SSNA1
ANAPC2
ERI3
HBP1
VPS45
NUP107
SLC35E2A
SFXN5
TBC1D17
AKT1S1
AHCY
RPS28
NDUFA7
TIMM23
ANGEL2
SETMAR
ZMAT2
RBM28
CHCHD5
HSPH1
CIZ1
DNM1
SAMM50
PRR25
SNRPB2
ZNF79
PAK2
ADPGK
ZNF213
MIA3
TLE4
MCMBP
FOXJ3
SPECC1
CLPTM1L
NDUFS3
KBTBD4
SSU72
ZNF302
TUT1
SEC13
TRAPPC10
SAMD10
PRPF6
MCM10
TMCO1
LCORL
KAT8
DIAPH1
TTC30B
DTX2
RNMT
FAM210A
SESN1
WASHC4
CEP57L1
TMEM248
DOT1L
POGLUT2
BIVM
ZNF551