ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NLRP12
WDFY3
GATA4
SPATC1
LAMP1
CDCA3
NFKB2
SEMA4B
MEF2C
WDR74
PLSCR1
XRCC5
OR10J1
FRG2C
ABT1
GNG2
KLF2
PPIAL4H
PPIAL4G
GSTA4
MTRNR2L1
CMPK2
FEM1A
TLR4
IL1B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC18A2
CALR3
C19orf44
A2M
PGK1
ITGB2
ADAM28
GPBAR1
SMPD3
RPS19
SPDYE13
STEAP4
IL7R
UBXN8
PDLIM2
PTK2
NUDCD1
BOD1
SLC12A6
NOP10
NUTM1
CXCL1
APOL6
RNF149
NIBAN3
H4C11
CCL26
IFRD2
ZNF221
H4C12
DNAJC5B
NEDD9
DMWD
GLRX
CD1A
PPIAL4F
PPIAL4E
PPIAL4D
DOCK8
CD1C
FRG2
ZNF718
ZNF595
SUN1
CBX1
PEX12
SNX11
COL8A2
DCAF12
GBA
NR3C1
DUX4
CLEC4G
TMEM104
NAT9
H4C3
H1-6
CES1
TMEM91
B9D2
DDX58
TMTC3
CEP290
NBN
KBTBD6
ASGR2
SCNM1
LYSMD1
PPP1R12C
GHRL
CTU1
EXT1
MTMR9
NUDT4B
NUDT4
RPS20
BCL3
H2BU1
H2AW
INTS9
HMBOX1
CYTH4
MS4A3
CLPB
ZNF780A
ZFYVE1
ZNF444
SH3BP2
TMEM115
FBXW4
VCPIP1
C8orf44-SGK3
MINDY3
ZSCAN30
DYNC2H1
TASL
BID
NPY4R
NPY4R2
SIGLEC6
MRPL24
SIGLEC9
TRIM41
EXD1
CHP1
NDUFS7
GPAA1
EXOSC4
CEBPD
TSNAXIP1
RANBP10
MICOS13
HSD11B1L
CD33
NUF2
SPRED2
PANK4
HES5
PEX3
ADAT2
LTB4R
CIDEB
LTB4R2
RUBCNL
H4C14
H4C15
SUCNR1
ST3GAL2
NBEAL2
RAB4B
MIA
EDDM13
NABP1
SLC23A2
SLC1A5
HPSE2
H4C9
IPCEF1
KBTBD7
MRPL30
MITD1
MMACHC
MEFV
CCR5
PAFAH2
BTRC
TRPV4
TPRKB
PROS1
ZNF225
RFX1
CHMP4B
PNKD
AAMP
BRF2
TP53I11
MTF2
PPRC1
MRPS18C
HELQ
PLEKHM3
RAB24
PRELID1
C19orf84
DHRS7B
DDX18
DENND3
CCDC152
TYROBP
TMEM243
TLE6
GSPT1
TRIP4
BAZ1A
RMND1
ARMT1
CCDC200
RAB39A
TOR1AIP2
TOR1AIP1
H3C13
H2BC18
ZNF226
FIGNL2
GNA11
FOLR2
P2RY14
TM6SF1
AP2S1
ALOX5AP
KRR1
INVS
ERP44
C8orf58
CCAR2
CARD8
RMDN2
ARHGAP25
PHB
EHD1
AP1B1
RAC2
ADGRG5
NDFIP2
MED23
KANSL3
FER1L5
COPS7A
BANK1
LRRC37A
IL1RN
CSF1R
NCF2
DISC1
YES1
PEMT
ZNF227
TMEM107
FRG1
CTTN
LMO2
ENOSF1
PPP1R18
TAF1B
ARID5A
CCER2
STAP1
MTRNR2L6
TBL2
ICAM1
POMP
GRPEL2
PPP2R2B
EIF4G3
FCGRT
CCDC146
CLEC10A
NME7
BLZF1
ATP1B2
TAL1
PPIAL4C
PPIAL4A
INSC
JOSD2
ASPDH
CAMKK1
INPP5D
SIGLEC1
ZSCAN22
PRCC
IGF1
DCP1A
ZCCHC4
DNAJC10
CD82
ANKRD63
ADGRE1
ANKRD18B
FAM227B
DTWD1
UTP3
ITGA4
PGBD4
EMC7
FLOT1
IER3
RIPK1
INTS12
GSTCD
HMOX1
PRRG2
NOSIP
LRRC37A3
AURKAIP1
NOTCH1
AHCYL2
WASHC4
SORBS3
MMP9
TBC1D19
RYK
RPS7
FBXO46
MEIOSIN
VPS26A
PRKCE
GPR68
LILRA2
SMC6
GEN1
RUNX1
VAV1
ASPHD2
PARP10
GRINA
S100A8
FRA10AC1
GATB
TEFM
MTIF2
SHISA5
TTC33
GALK2
COPS2
ARPC3
IPPK
GABPB2
PHC2
ERLIN2
OBI1
CTSG
RFFL
RAB27B
CA13
PPP6R1
USP3
TMEM154
FGGY
OLFML2B
CAPG
MARCO
RASSF5
RPL6
NFE2
UBR1
SSBP1
DPY19L4
LYSMD2
SYMPK
FOXA3
PRR5
PEAK3
SF3A3
TEAD3
CCDC149
TRNP1
SSBP2
DR1
PPP1R12B
TBPL1
RPL5
BORCS7
MPEG1
FASTKD1
LCE3A
TMEM68
TGS1
TNNI2
TSSC4
VPS13B
PHF12
DDX1
ACTRT3
H3C3
H2BC3
DHRS4L2
RPS6KA1
SLC39A1
CRTC2
DHX8
BSG
ZAR1L
BRCA2
PIK3CG
MAP1S
RBBP5
ZC3HAV1
KCNK6
GTF2H2C_2
GTF2H2C
MRPL42
RNPEP
ADGB
H1-3
SLC25A10
SCRIB
RPGRIP1L
FTO
NDUFB7
PPP1R11
NCALD
CEACAM21
VOPP1
SPATA24
SYNE3
BNC2
SLC35B4
ZNF268
CSF2RB
XCR1
NSMAF
ANXA2R
ZFP64
JAK3
RPIA
CARD19
IRF9
FAM133B
BCL2L13
ARHGEF18
FAM228B
SF3B6
EPN1
TRIM31
PTK2B
TRIM35
HSH2D
BCAN
TACC1
OR1D5
GTF2H3
EIF2B1
FAM167A
RPH3AL
TMEM11
MRPL48
PCBP2
LSG1
ZNF224
LCMT2
ADAL
DPY19L3
PPIP5K2
ZNF554
SECISBP2L
TCTEX1D1
FASLG
ZBTB45
CCR1
PLCXD2
SEC14L1
INO80D
NDUFS2
ADAMTS4
ALG10
MRPL1
CCDC88A
TTC14
NINJ2
DSTYK
ZNF350
SLC24A1
CDK5RAP2
RALB
TULP2
NUCB1
PDE4B
CAVIN2
CHCHD5
NDFIP1
FCAMR
ZNF56
CCDC90B
SLC1A4
APPL2
FUT10
ZNF175
SDSL
HCK
TMEM212
SCGB1C2
SCGB1C1
ACTA2
PPM1M
TMEM242
POLR2J3
PARP2
USF1
ZC3HC1
TMEM229B
PPP1R15A
PLEKHA4
GFUS
IDH3B
JRK
SLC39A13
ADAR
SCAMP2
PSMF1
SIRT2
NFKBIB
PEX2
H4C4
H2BC6
STING1
SNX17
EIF2B4
SLC9A1
TACO1
SELPLG
OLFML3
TFPT
PRPF31
MRPS23
CPEB3
MARCHF5
ARHGEF3
STX7
CCDC9
SAMD4B
GMFG
SMG6
MFSD10
CAPN2
TIFAB
CD93
ZNF235
VSIR
PSMA8
PDE4A
COMMD2
PCM1
TTI2
CHMP7
GNB4
RGS12
TMEM222
H2BC5
H1-4
HUS1
TEX46
KDM1A
MIER2
TSC1
GFI1B
ASF1B
AQR
UBR2
LARS1
EMILIN1
BRWD1
PIGV
ZNF518A
SLC37A2
NME1
RPL37
UBE4A
ANKRD40
INKA2
DDX20
PRKD2
MAML2
ZNF286A
EIF2D
RIC8B
SUPT7L
SLC4A1AP
STON2
PPP5D1
CALM3
SIRT4
PSMD9
HPD
LMBR1
ACRBP
BCL2A1
GTF2H2
NFX1
KDM6B
ACTR3
PLEKHG3
MCUB
CCNL1
HMGB1
USPL1
ZNF846
RBCK1
TCEA2
KLHL20
ARHGDIB
FOXP1
ZBED4
MPG
RHBDF1
ORC2
MPRIP
RASSF2
RAB3IL1
GAS6
SCAF1
RRAS
OAZ3
SCAMP4
ADAT3
INO80C
MORF4L2
H1-2
TATDN1
NDUFB9
POLE4
HERC6
ISG20
LRRC25
CTNNB1
ZC3H6
RRS1
ADHFE1
TRDMT1
HIBCH
H4C8
SLC22A18
SAR1B
SPOP
TRIP12
FBXO36
SIRT6
ANKRD24
KDM3A
LRRC8D
MED4
N4BP2L2
LGALS12
INTS10
TEX44
TNFAIP1
IFT20
USP15
SLC44A1
POLDIP3
GOSR1
ARID3B
PPP3CC
PRIM2
SERPINE1
PRKCD
ALG10B
ITPRIP
MALT1
SHKBP1
UXS1
C1orf159
MKRN3
BOLA1
ZNF148
RNASE1
ING4
MRPS31
GFOD2
TRIM69
TMEM41A
SLC45A4
MOB4
EMC4
RXFP1
CWC25
PES1
NUFIP2
TCN2
DCAF10
CCND3
SETDB1
H3C7
H2BC9
H4C7
SLC35E2A
MARCHF6
PSMC1
DDX23
FBXW11
FBXO28
ESCO2
CCDC25
SQOR
BNIP1
ROPN1L
PLEK
ANKRD22
VPS50
HEPACAM2
PPIL2
FCRL4
TVP23B
TMBIM4
PSMA1
EFHB
DRAP1
C11orf68
SLC22A16
TIGD6
HMGXB3
MYL12B
DUSP7
CCNC
MBNL1
ASH2L
DSCC1
SRGAP2B
SRGAP2C
RPL27
MRPL27
EME1
MYBPH
TPR
ODR4
AGTRAP
RXFP4
AOAH
CAMP
GTF2H4
ARMH3
THAP1
CNPY3
H2BC7
H3C4
H2AC7
DENND4B
H4C5
SAT1
PRAM1
COX7C
TATDN3
NSL1
ZMPSTE24
TXNDC15
ALDOA
TUBA8
ZNF212
ZNF420
NUDT13
UBLCP1
MICAL2
RNASE10
MYO1A
APOL4
CCDC124
PTPN6
C12orf57
COPS4
ZNF331
ZNF180
POLR2M
COX7A2
ZNF574
MRPL34
METTL3
ZNF76
DDA1
FNTA
CYP4V2
ABHD8
SPIDR
TFEC
EMP3
CDK5RAP1
ARL8B
TSG101
CCDC114
TSSK6
NDUFA13
TSPAN16
MLNR
ORMDL3
DRG2
RNF166
CBLL1
PTGS2
CALHM6
RPS15
USE1
GSK3A
LSM8
H4C1
H3C1
H1-1
BAZ2B
MORC1
BMS1
MICU2
PRPF18
BANP
ARHGEF1
GNAI2
UTP23
H3C2
H2AC4
H4C2
HDDC2
MCTP1
S100B
SIGLEC7
SHISA7
METTL25
CCDC59
WASHC5
NSMCE2
EXOC3L1
E2F4
XAF1
DOHH
TFEB
VTA1
NMBR
OPA1
N6AMT1
RABGGTA
NOTCH2
LUC7L2
POLR3B
SASS6
FMC1-LUC7L2
FMC1
TRIB1
TAGAP
FBXO39
C1QA
RBM45
PDE11A
RAB11FIP1
NFKBIA
C10orf95
METTL6
EAF1
TESPA1
SAMD14
BRIX1
ARHGAP9
MARS1
PCNP
RASA1
CBFA2T3
RAB3GAP1
ZNF749
C18orf21
NUDT7
RPL29
SUGT1
MAGOHB
ETV6
CDIPT
TCF3
MRPS15
KMT2B
PRKCI
CNTRL
UNC45A
HDDC3
H4C6
TEX36
MAPK1IP1L
LYNX1-SLURP2
LYNX1
COX18
ATP13A2
ZKSCAN4
SH3TC1
SIGLECL1
FCER2
PEX26
PUM2
ZNF557
WNT2B
KCNK9
TEKT2
ADPRS
VIRMA
MRPL3
NEK4
OR52W1
C11orf42
TTC13
ARV1
ZCWPW2
AZI2
H3C8
H2BC10
TRIM71
TLR1
TOP3B
MRPL16
ERCC1
MRPS10
PSMC6
STX1A
TMEM121B
PTAFR
MRPL44
ZNF410
DGAT1
PDCD6IP
RPL23
TMCO1
TRIM8
C19orf53
YIPF2
TIMM29
COMMD4
HARS2
HARS1
TTC26
R3HCC1
P2RY6
SERPINB13
KRT36
WDR70
THEM4
SGF29
IL12B
C1orf162
TIMM21
FBXO15
SLC7A11
NDUFS3
KBTBD4
NUP54
SDHAF2
CPSF7
POLI
CLN3
APOBR
SLC35F6
MX1
LTN1
DGKZ
RUFY3
NCF4
PTPN12
FBP1
POLR2J2
MAP2K1
PRKCSH
CCDC151
UBE2F
EMB
BACE1
VRK2
ZSCAN31
AVIL
NSFL1C
TMEM70
ELOC
POLE3
C9orf43
TMEM65
EIF2B3
TBC1D13
C8orf37
DNAJB12
SFSWAP
PSENEN
KMT2E
LIN37
RPL31
HEATR5A
BECN1
F2RL3
STAB1
CCNI
UFSP2
C4orf47
RPL17-C18orf32
RPL17
C18orf32
CCDC107
PLD1
HBEGF
SULT1B1
MDM4
ODF3L2
FAM160A1
IFI6
LY9
SMIM33
PDSS1
GDAP1
UHRF1
SLFN12L
NKAPL
ARRDC5
TNFRSF10A
SMC1B
RIBC2