ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22001292 | DLD-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◣ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

H4C11
GSTA4
H4C12
DUX4
H4C14
UBC
FRG2C
FLOT1
IER3
KLF6
H3C2
H2AC4
H4C2
HEXIM2
WDR74
H2BC5
H1-4
CALM2
EIF2D
DCP1A
H2BC11
H2AC11
CCDC200
GDF15
H4C15
ERRFI1
PRDX1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H3C15
H3C14
H2AC19
H2AC18
KMT2A
H4C5
EEF1A1
MTRNR2L1
CDC25C
FAM53C
ZBTB4
SLC35G6
POLR2A
KRT19
AREG
EREG
H4C3
H1-6
H2BC21
H2AC21
H2AC20
ZFAND5
GTF2IRD2
LOC102724265
OPRL1
LKAAEAR1
BBC3
SLC9A1
MTHFD2
ARPP19
H3C13
H2BC18
PKM
VRK2
HEXB
ID2
GAPDH
TRIB3
H2BC4
H2AC6
CITED2
ARHGAP32
PMAIP1
RNF43
PPP4R3B
DRG2
EGLN1
DDAH1
CCN1
NUCKS1
H1-2
INO80D
STX16
TMEM242
CALM1
ZC3H11A
ZBED6
BCL9L
H3C12
H2BC17
H2AC17
C17orf75
TMEM68
TGS1
VWA8
ZER1
ZCCHC3
ACYP2
DCAF10
GTF2H2C_2
GTF2H2C
GTF2IRD2B
TOB2
RBM39
ZNF341
SYDE2
H4C1
H3C1
H1-1
POLR3D
NRL
PCK2
PERP
EPCAM
RHOB
ACSF3
RCOR3
PTBP1
AAR2
MKNK2
MED23
H2AX
GTF2H2
COL23A1
TMSB10
ZNF296
GEMIN7
PRSS23
H3C7
H2BC9
H4C7
LAMA3
TNFRSF6B
PLEKHM3
H4-16
H2AJ
TPD52
AMOTL2
KRT8
PRSS22
SRSF2
MFSD11
NABP1
SRSF6
JUNB
CIRBP
STX18
IST1
ZNF518A
TUBGCP3
NFKBIA
TRA2B
ELOB
SDC4
SMAD3
RPL18A
TBC1D22A
BUD13
MIER1
PATZ1
TP53BP2
HNRNPA3
DHRS13
FAM227B
DTWD1
LTC4S
TMA16
P4HA1
TPI1
MEAK7
C5orf24
ARHGEF35
GBA
LATS1
MYL12A
UBE3C
ANXA4
TACSTD2
PPFIBP2
DDIT4
GTF2A2
TBC1D14
TRAM2
ADPRHL1
MAPKBP1
ETS1
PRAG1
RPL10A
SRSF3
DMTF1
H2BC12
H2AC12
KRT18
MRPL44
SRCAP
LOC730183
ZNF143
H2BC7
H3C4
H2AC7
FAM136A
TNRC18
GADD45B
KNTC1
NFIB
HIC2
INO80
ALDH3A1
GRHL3
PSMD8
ZNF410
HMGN2
RORA
CTNNB1
SLC24A1
RTN4
BCAS4
MANF
SLC44A2
ARL15
KEAP1
SIPA1L1
TNFSF15
HRH1
USP30
CASC3
MPHOSPH10
MCEE
AIF1
PRRC2A
SNX5
MGME1
COX18
KIF21A
ZNF609
TBX3
MTF2
MTMR2
FRG2
ZMPSTE24
SAR1B
RNF220
ZC3H12C
FRA10AC1
GTF3C2
XPO4
PHKB
ITFG1
PIAS3
CFL2
SKIDA1
CRIM1
CCDC153
RBM25
TM2D1
DDX6
H3C11
KANK2
H4C13
NDUFS7
ODF3L2
RMDN2
PFKFB3
NFYC
TUBA1B
GET4
ZNF292
TRIB1
NOXA1
ADAP1
DYNLL2
CHD2
PPIA
RAD54L2
EIF1
DNAJC19
UGP2
TBC1D19
MTCH2
DNPH1
FAM240C
MRPL21
IGHMBP2
EIF4A3
ATP8B1
AFF1
C1orf53
ITGB1
EIF4G1
LSM14A
CHAC1
CBX4
PNRC1
LDHA
RFT1
METTL15
KIF18A
RHBDD1
SPTAN1
RNF146
POLR3H
TGFB2
NIPSNAP2
TRDMT1
CREBL2
ZBTB37
FAM162A
CCDC58
ATF4
DUS1L
PDF
USP3
DARS1
USP24
ZNF706
NOXO1
GFER
KDM7A
MCL1
WDR31
UBE2J1
TBL1XR1
NFKB1
ZFAND6
ANKRD18A
FECH
RUNDC3B
GTF3C5
UBE2S
KMT2E
ARID1A
SUCLG2
MTA3
TRIM55
TFF1
MAIP1
ZC3H4
H4C4
RGS3
H2BC6
DOCK7
KLHDC9
TATDN3
NSL1
ZBTB7B
TERF2
TMEM106B
H2BC15
H2AC15
SYK
MLLT10
NIBAN2
VWA1
TOB1
HUS1
PDCD2
SMIM19
SLC20A2
PKP4
CCDC148
VHL
DENND6A
TJP1
ASB2
VPS54
LAMP1
SLC25A51
ERCC1
MEMO1
CDKN1A
HILPDA
LOC100130520
CD300H
ZBTB45
COMMD1
MTIF2
TRIP11
TJP2
LEPROTL1
ELF3
GATA6
TMEM222
HSPA5
INTS12
GSTCD
RPL5
ATG5
SEC11A
PSMA1
KAT6A
ZDHHC17
EBAG9
TM2D2
ADAM9
SVBP
ERMAP
EPB41L4B
FAT1
NSF
SLC39A14
RBM43
IL20RA
MUC20
KMT5B
ZCCHC4
SUPT4H1
ZNF76
SMC5
YWHAH
REL
BCL9
RAPH1
NUF2
MYLIP
ACTB
ANKRD40
EIF4G2
STAG1
MUC3A
SAV1
FUT4
C15orf61
VARS2
PARP9
DTX3L
HMGB1
BANP
WDR11
ZSWIM7
TTC19
ZNF770
HOMER1
CDH1
PCBD1
ARHGEF38
MRPS31
ZNF286A
STMP1
HNRNPF
CREBZF
FANCL
CAV1
RPS3
NME1
ACTRT3
MFF
PSMC1
PAIP1
SHB
SH3RF1
CMTM8
DLX4
FOXJ3
SEC13
AURKAIP1
PSMF1
REXO4
ADAMTS13
C6orf62
ZFP62
LNPEP
ZBTB38
GADD45GIP1
TGFA
SEC24D
EPN2
TMEM41A
KATNBL1
MRPL1
UFL1
PCBP1
AAK1
RALGAPA1
MTERF4
HERPUD1
IPO9
RABGAP1
MTHFD1L
BTG1
NFAT5
USP34
EZR
SMCHD1
AHR
UBE2E3
SPRY2
LRP6
UBE2V2
DEK
CHMP6
DISP1
CEBPB
CEBPA
IFITM2
IFITM1
WSB2
ATP5MF-PTCD1
ATP5MF
BRIX1
MRPL3
CIAO3
SLC25A3
CSKMT
C11orf98
KDF1
MTHFS
PDE2A
USPL1
EIF2S2
CDC73
FRG1
SLC35A3
HEBP2
NUDT4B
NUDT4
TMEM45A
ARHGAP45
ARHGEF5
CLU
KLRC2
SOD2
WTAP
EIF4A2
C14orf93
KIAA0232
FUT11
NR4A3
ARL5A
SNTB2
SOCS1
IGF2R
PSMC6
ACOT2
EIF4A1
EXOSC8
ALG5
CGGBP1
C3orf38
TACC1
PXT1
KCTD20
KAZALD1
SP1
TCF20
PAK6
IRS1
TM4SF1
SRSF1
PCNX4
XBP1
H1-3
NAPEPLD
TMEM95
KCTD11
MAN1B1
DBF4B
RPL13
SLC38A2
THEM4
RNF6
AKIRIN1
PTDSS1
MTERF3
ANKRD36C
TUBA1C
BRD2
SENP6
PIK3R1
PRDM5
CASD1
ALG13
ZNF562
TMCO4
TNS4
FUS
ARF6
STPG3
NELFB
MAP2K2
UBA2
TMEM216
CPPED1
SMG6
CD55
MACC1
MUC1
DCUN1D2
SRR
ZYX
FAM131B
CDC25B
PGM1
CENPB
PHLDA2
NRP1
SLCO1B3
NSFL1C
SMIM12
YWHAQ
SLC44A1
SNX16
METAP2
PYGO2
LOC101928120
EXD2
STX6
RRP1B
HSF2BP
FTH1
PSKH1
PHLDA1
H1-5
H2AC16
TMEM17
LRRC61
BCAR1
DR1
RPS5
LTBR
SELENOT
SOCS5
BAZ1B
TEX22
DSG2
DLC1
TNNI2
STAT5B
TRIM3
SYT8
MAD2L1BP
CCT4
MDM4
RPL6
PTPN11
ELF2
TEX46
KDM1A
ZFP36
ZNF623
SP3
THBS1
DCLRE1B
AP4B1
MTHFD2L
ERN1
PLEKHG2
ZFHX3
ISG20
SRXN1
F3
SYNJ2
MOV10
HTRA2
DQX1
PTEN
KLLN
PCBP2
GALE
RABGGTA
UPF2
UGDH
RANBP9
FOXJ2
FAM184A
VWA7
SASH3
POR
NUDCD3
SLC39A13
HEXIM1
XRCC5
AGPS
PGGT1B
SRSF4
ITGAV
LSR
C4orf36
CACNB1
RPL19
EPM2A
NIPA1
CCNI2
PDE6D
COPS7B
BOD1L1
SNAP47
JMJD4
TVP23B
SNRPC
HNRNPU
AKAP10
RCC1
GSK3B
OAT
EPG5
FH
SLC25A37
SMARCA4
DLAT
LRP2BP
ANKRD37
TNFSF9
PRKCE
PSME4
CRYBG1
PRTFDC1
ZC3H6
SRP68
GALR2
ARFGAP2
RPL37
ARL6IP1
TSPAN10
NPLOC4
PHF3
SNRPG
STK40
ANP32B
FOXH1
PPP1R16A
PAK1
PDS5B
CLDN4
KCNQ1
KDM4B
SRSF7
TUBB4B
VPS45
EMC4
INTS6
HECTD2
ZNF621
ZAR1L
BRCA2
PBK
SGK1
TESMIN
BAHCC1
ICMT
SCRN1
MYO1B
LAMC2
CLSTN1
TMPRSS13
SULT1C4
TRIP4
TCF12
DPY19L4
MOB3A
IZUMO4
POLDIP3
AVPI1
WIZ
RBM45
PDE11A
KIF22
BLOC1S6
OCIAD1
TTC26
CEP135
ZNF185
SLC39A10
CHAMP1
FGGY
ZNF276
VPS9D1
RNF135
MPP5
TIA1
RHOG
YAP1
SMURF2
EP400
DPY19L1
GRHL2
DMAP1
GMFB
ERCC6L2
LEMD3
SCFD1
MARCHF7
PLK2
SMAGP
ACTG1
NDST2
SCAP
CELF1
ZBED8
ZSCAN9
DCK
UEVLD
DPYSL2
CTDSP1
DNAAF2
ABCA5
H3C10
H2BC13
H2AC13
PTPMT1
PFKL
TSKU
MYO5A
XRRA1
SPCS2
NDUFC2-KCTD14
NDUFC2
HSPA9
STK11
SERTAD1
MFSD10
ZNF236
H2BC14
H2AC14
SH3D19
TNKS1BP1
HKDC1
KRT72
TOMM22
ARHGEF12
GPAA1
EXOSC4
LRRC37A3
TET3
DDX59
ATL2
REPIN1
TMEM168
UBE2F
IMPACT
KIF5B
SRD5A3
UGCG
FAIM
DMXL2
SGTB
NLN
AGR2
DCAF8
TACO1
DGAT1
COMMD2
ADK
TTI2
RBL2
DGKZ
COPS3
PPP1R18
PTPDC1
TM9SF3
COMMD10
RICTOR
GOLM2
E2F7
SGPL1
PRELID2
NRM
C19orf33
PAFAH2
KMT2D
PEX3
ADAT2
NXF1
DIP2A
C8orf58
MRPS15
SURF6
CCNC
YARS1
S100PBP
KLHL12
RPS8
RPS14
IPO4
DYRK1A
LRBA
SQSTM1
MTMR10
VIPR1
MFAP3L
ANXA11
TAF4
LYPLAL1
CCDC88A
VIRMA
ATR
ZNF740
CSAD
ZC3HC1
RRP8
ILK
ZNF692
INTS10
HLCS
ZNHIT6
NADK
PNMA1
PARD3B
SCRIB
METTL9
EEF2
USP21
DLST
NFKBIZ
SLTM
ATIC
CDC16
RFESD
FAM20B
PTBP3
L3HYPDH
JKAMP
GPR39
CHST11
WWP1
SATB2
BRF2
IPO7
C6orf226
TIGD1
EIF4E2
EXOSC6
RRM1
UBE2Z
STAMBPL1
SDCBP
MED18
PPIG
NDRG1
DYNC1LI2
SF1
STK38L
SHTN1
HINT1
ANKEF1
TEX38
ATPAF1
MET
UPF1
SPOPL
AIFM2
ZNF579
ALDH7A1
KBTBD11
CLTC
EIF3F
ZFAT
LRCH4
FBXO24
MRPL48
NELFA
EFCAB2
CRLS1
MAT2A
RPL11
HNRNPR
GNAI2
ARFGEF2
INTS5
PABPN1
NUDT9
ZC3HAV1
ZCCHC17
SNRNP40
PDIA3
MT2A
SKA2
PRR11
FAM168B
SORBS3
MCTP1
SNX9
MRPL39
EIF2B5
RFX3
DYNLL1
PPP1CC
UBE2L3
NKIRAS2
DNAJC7
DGUOK
RHBDD3
EWSR1
SRSF9
H1-0
GCAT
PHC2
SIK2
THEM6
GSAP
ARHGAP27
H3-3B
SMN2
SMN1
RAD52
PCIF1
TXNDC15
CRK
DHX9
POLR3G
MBLAC2