ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CDCA3
HHIP
WDR74
PRCC
BTRC
TSNAXIP1
RANBP10
TCEA2
CYTH1
AP2S1
TMEM115
MMACHC
CCM2
PKIG
CHMP4B
IFRD2
NUDCD1
FEM1A
KBTBD7
PHF12
TMEM11
PLCL2
PHB
GTF2H4
SMPD3
CLPB
PPIAL4H
PPIAL4G
AHCYL2
ALDH1A2
PCDH10
GSPT1
FARSA
CALR
MRPL24
SCNM1
LYSMD1
ST3GAL2
CALR3
C19orf44
BANP
SRPK2
RHEX
ATP2C1
NKAIN4
ZNF718
ZNF595
APBA2
WDPCP
MDH1
KANSL1
KBTBD6
NFE2
STAU2
CXCR4
NPRL2
CYB561D2
ZMYND10
STATH
PI16
RBL1
CR2
C3orf86
INTS9
HMBOX1
VCPIP1
C8orf44-SGK3
ACADM
C1orf159
PEMT
STK17B
SLC4A2
CDK5
ZFYVE1
SLC39A1
CRTC2
MICOS13
HSD11B1L
ZNF444
IQGAP2
DEGS1
BOD1
PPRC1
AGBL1
TRIB1
DGKA
PYM1
KMT2B
CHCHD2
SHQ1
GRAP2
ING3
INVS
ERP44
SCAF1
RRAS
NPIPB15
LZTFL1
H2AZ2
GFRA4
PNKD
AAMP
CST5
CD1B
EMILIN1
ARHGEF7
PANK4
HES5
BAIAP2
PPP1R16B
TMTC3
CEP290
PAFAH2
NEIL3
DCLK3
FRG2C
MAD2L1BP
GTPBP2
ZNF331
PARL
RUBCNL
VPS50
HEPACAM2
MND1
CD69
DDX23
LTB
LST1
GNA15
TOX2
NFRKB
CD300A
GSK3A
TLR9
FXYD2
PVRIG
PPP1R12C
CD1A
LAIR1
H3-3B
UNK
DDX4
MDM4
ABCF2-H2BE1
ABCF2
CHPF2
RAB37
KRTAP16-1
BNIP3L
BHLHE23
ZNF225
AP2M1
EPHX2
LGMN
UBR2
CTU1
REPIN1
SUFU
ACTR1A
DCAKD
NMT1
DSTYK
GATB
MSL2
FBXO48
APLF
FGR
VIPAS39
AHSA1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GSR
FBXL19
PTPN6
C12orf57
DUX4
SEC14L2
RUFY3
ITGA6
FAM222A
SCGB1C2
SCGB1C1
ODF3
GFUS
CCDC146
LEF1
ZNF335
RCSD1
WNK1
ZNF337
SLC35B4
ZNF784
ZNF821
PPIAL4F
PPIAL4E
PPIAL4D
TLR6
BIRC5
TSSC4
STAU1
TIMM21
FBXO15
ABHD12B
KCTD9
CDCA2
THBS4
THEMIS
TNFAIP1
IFT20
PRKD2
LDLRAD4
EMP3
CCDC114
LAT
RPGRIP1L
FTO
HSPA13
SYT12
PSMF1
SLC2A6
FNTB
NAPA
FMNL1
TRAF4
MAP1LC3B2
NTAN1
ITGA4
TJP1
RIC8B
SLC12A6
STK25
MKRN3
GZMA
PEX14
DFFA
LSM4
ADAMTS1
PPP1R12B
RCAN1
POLDIP3
CCL1
PRPF40B
TGM6
IL23R
TMEM70
ELOC
ATP6V0A1
PYGM
FOXP1
SOX17
TNFRSF13B
LARS1
RGL4
TFEB
SLFN12
NBEAL2
DNM1L
STAP1
BICD2
NSMF
FAM193A
H6PD
NUF2
LMO2
TMEM101
TTI2
MZB1
CAPN15
MRPL1
ARHGEF3
SLC47A1
FASTKD1
FBXW11
TESPA1
PTK2
CDT1
TAS2R50
ZFYVE19
DNAJC17
FHAD1
GDE1
CCP110
JOSD2
ASPDH
SCML4
CCNG2
NME1
TPGS1
THYN1
ACAD8
BORCS7
ATP11B
SYMPK
FOXA3
TFPT
PRPF31
ZBTB45
RPS26
UBQLN4
LAMTOR2
DHX33
TNFRSF4
CCAR2
C8orf58
D2HGDH
SSBP1
FAM3B
HECTD1
TLE3
STK4
PHF13
N4BP2L2
PLK1
TMEM107
RLN1
SYTL2
PLCG1
ASB2
VAT1
OGN
NET1
MMP9
TMC6
TMC8
ARHGAP24
PEX26
ZNF500
DPP6
ATAD2
RPIA
RPL29
DESI2
DUS3L
DHRS11
ARID3B
DOK2
ZGPAT
ARFRP1
MED23
UTP3
VOPP1
IFIT3
WIPF1
LIMS4
ZNF165
DRC7
RFX8
ZNF354A
MX2
SOX6
C11orf58
ZNF133
TTF1
RHCG
ALDH3B2
FAM185A
BCL9
FBXO46
MEIOSIN
OSBPL5
TMEM258
FEN1
FAM168A
NCLN
UBE3C
TFAP2E
SNX17
EIF2B4
OR4D1
ICAM2
NUCB2
EPHA1
PRRG2
NOSIP
MFAP4
HRH2
OR10T2
ZNF56
RANGAP1
COPS4
DNAJB4
CDK8
TNFRSF1A
IL17RA
WDR87
SIPA1L3
FCRLB
TES
ATXN7
MED15
HDAC7
MEN1
IPO4
RETNLB
COX7C
MAMSTR
ZNF354B
LCK
DYNC1I2
MBNL1
LYST
DBNDD1
ORMDL3
NSFL1C
RTTN
TMEM245
SLC33A1
CCDC90B
PTCRA
RNASEH2C
SIRT4
PNLIPRP3
GP5
GGA2
RALGAPA2
ERAP1
LRIG1
ABTB2
DLC1
CHCHD3
SMAD7
ZFYVE28
CFAP99
SMO
ADORA2A
SERHL2
FIGNL2
BRF2
FCGR2A
CSTA
STX18
FAM228B
WBP2
SF3B6
TRAF3IP3
NUDT13
RBM38
EIF3F
DEK
CDK5RAP1
APBB1
FRG2
IFNB1
ZNF749
ZNF226
TRAPPC3
RAB1A
MSH5
CLIC1
SUPT4H1
TAF3
ZNF408
ARHGAP1
DCP1A
LEPROTL1
MAP3K8
TTC13
ARV1
MTRNR2L1
EVL
SNX1
CIAO2A
TMEM59
TCEANC2
CLEC16A
DEXI
UBC
CDK5RAP3
AURKAIP1
TRIP4
TMEM163
PPAN-P2RY11
PPAN
ANGPTL6
GALK2
COPS2
NDUFB3
FAM126B
TTC33
BUB1B
WDR24
LIMS1
SVIP
HIPK1
TLE4
ZSCAN22
ZFYVE21
XRCC3
UBE2J1
FMO1
TBC1D31
C19orf53
C19orf67
CISD3
STMN3
RTEL1
POMT1
PANK3
MTA3
USP48
ARHGEF1
ASNS
MRPS18C
HELQ
CD59
AAR2
MYO1G
RIPK4
GSTA4
TRAT1
TSC1
GFI1B
CFAP20
TCF3
CALM2
PPP1R18
RASAL3
AQP3
SNRPD3
GUCD1
GPANK1
CSNK2B
C6orf47
LY6G5B
RABAC1
IDNK
SELENOH
CCNI
ETV3
PIGU
ZNF563
ZW10
SNRPB
ADD3
ZMAT5
UQCR10
TNPO3
CXXC5
IFNA1
STK16
GLB1L
ASXL1
SF3A3
GPR160
FGF11
TMEM102
GTF3C2
CXorf49B
CXorf49
TRAF7
USP30
SWI5
GOLGA2
SMCO1
ZNF101
ATP13A1
HDAC9
RPL18A
TOR1AIP2
TOR1AIP1
PHF23
GABARAP
DVL2
ADAD2
TUT1
WDR97
MAF1
CCND3
YIPF2
TIMM29
TAF8
KIAA0408
MTMR9
SMARCAL1
RACGAP1
THAP11
NUTF2
CENPT
ATP2A3
TM7SF3
SUGP1
MAU2
GPKOW
PHF19
MCM7
AP4M1
PSMD11
KAT7
NOP14
GRK4
ZNF140
ZP1
PEX3
ADAT2
COL6A2
KRR1
SLA2
PTDSS2
MYO18A
LAX1
HEMGN
MTF2
TMEM229B
ETFDH
C4orf46
BCL3
COX16
CLDND1
SH3BP5
TMEM127
CIAO1
KCTD5
SIRT2
NFKBIB
PPIP5K2
RBM6
SMARCA2
FAM184B
SCRIB
UBAC1
ADARB1
ARHGDIB
HEXIM2
FOXN1
THRAP3
ZNF354C
PEX5L
SLA
GCSAM
ASPRV1
TTBK1
PEAK1
HMG20A
GTPBP3
ANO8
ZSWIM8
CHCHD1
GATA2
HEXIM1
MYLK4
ARL5C
SLC26A11
TACO1
SSH2
AFF3
REXO4
ADAMTS13
TMEM160
ZNF527
ZNF169
STAT4
C16orf91
ZSWIM9
LIG1
ATG9B
ABCB8
ARHGEF2
GRHL3
RPS7
ACSF3
ZAP70
NDUFS3
KBTBD4
CANT1
PLAGL1
RBBP5
SYTL3
TMEM45B
ANTKMT
CCDC78
AQR
YJU2
MED18
NT5C2
DOCK10
TMIGD1
ZNF235
NOTCH3
LPAR6
MRPL44
RBM28
GFM2
FDPS
VKORC1
ZNF224
CCDC150
ARHGAP4
NPY4R
NPY4R2
BUB3
BTN3A2
WBP1L
PRDM1
CTHRC1
CD3E
OR10P1
RPS20
ALG10
CD28
DIABLO
MTBP
MRPL13
CHST12
PPP5D1
CALM3
UBE3B
KCTD10
GTSE1
SLC32A1
ANXA1
KCNQ1
RPL23A
RAB34
TRAFD1
SRSF10
AOAH
KIF20A
BRD8
ATP5F1D
CBARP
FLT1
ZNF343
XPC
LSM3
BLK
OSCAR
NDUFA3
TIFA
PCNP
AFF1
GUK1
ACOT7
ESCO2
CCDC25
LIG4
PALLD
PA2G4
CCDC97
PLAAT5
ANKRD40
H4C3
H1-6
TULP2
NUCB1
SERPINI1
PDCD10
TARBP2
MAP3K12
NAGLU
VPREB1
ARMH3
WDR46
PFDN6
RAB22A
TRIM47
SNAPC3
LIME1
DHX8
RTN4
DEF6
TOB1
KDM3A
GCNT1
GPR157
UMODL1
VRK1
NOP16
HIGD2A
ZNF276
VPS9D1
RAPGEF1
ENTPD4
ARHGAP9
MARS1
CD46
TCF7
SMG8
TRAK2
STRADB
RPS13
MRPS31
MAP3K7CL
FBLN2
SPATA46
CASS4
ASIP
METTL11B
CCDC88A
RUVBL1
SUCLG2
DAB2IP
ADGRG1
RPP40
GOLGA3
CACNA2D4
TMEM123
UHRF2
FAM8A1
MTERF4
PPP2R5B
NFKBIZ
CCDC15
CUEDC1
IRX2
C5orf38
CLMP
AHCY
PUS10
PEX13
SOD2
WTAP
SLC25A19
TOMM40
PTPN22
TMEM222
TUBGCP3
SDCCAG8
CEP170
GNG12
BPI
CIC
WRNIP1
SIT1
UTRN
CFAP410
CCDC200
GPR137
CLN3
APOBR
YPEL3
TBX6
PSMC2
DNAJC2
NIBAN3
ALKBH3
SERBP1
PSENEN
LIN37
ADGRE2
SLC7A8
SDE2
MTRF1
CMTM1
DGAT1
PRKCI
PPFIBP2
MRPS16
MUS81
CFL1
SIRT6
ANKRD24
MEF2C
RORC
TOE1
MUTYH
AGK
ADGRE1
TBC1D21
ZNF850
SCN3A
INTS12
GSTCD
ZSCAN5A
GTF2H2C
GTF2H2C_2
PCM1
FCSK
SEL1L
KLHL20
THOC2
CTDP1
ANAPC1
CHMP7
TTC39C
DLX5
C12orf73
KRI1
CDKN2D
ANXA4
AAK1
SEPTIN9
UBE2V1
NEDD8-MDP1
NEDD8
GMPR2
LNPEP
FNDC11
LSG1
NCOR2
PIK3CG
NKD1
NANOS3
CD3G
CD3D
WBP1
INO80B
EMSY
OSBPL8
EPSTI1
PABPC1
CNPY2
CTF1
BCL7C
ASAP1
EIF4A2
NMT2
ARHGAP45
CNOT4
ZNF227
STING1
METTL26
SYNRG
RPL22
C17orf75
C12orf43
RANBP1
GINS3
TRRAP
CLTC
NDUFS7
HBP1
STARD10
ATP5MF-PTCD1
ATP5MF
TMEM143
SYNGR4
MAX
H4C8
SERTAD2
BOLA1
FTL
NR1H3
ACP2
CYFIP2
CASP8
METTL24
EIF1AD
BANF1
NEIL2
DEPDC7
FKBP5
GRK6
RAB30
TRAF3IP2
BRWD1
NRDE2
E2F7
SIGLECL1
NUP153
B3GALT4
VPS52
RPS18
ZKSCAN8
NYAP1
OR1F1
AKNA
PTAFR
LRRC29
SLC24A1
RPL27
CILK1
AGPAT3
SOX4
CSNK1G3
SLC39A3
ARMC1
RNF166
RNF220
RARA
CDKN1A
S100A4
S100A5
S100A6
ERVH48-1
TSC2
NTHL1
ING4
VPS41
PCBP3
ZC3HC1
CYP2U1
CBFA2T3
GABPB2
UGT1A5
UBB
ZMPSTE24
ZCCHC8
EVPL
SBF1
GCSAML
SDHAF3
DDX49
COPE
GTF2H2
MAML3
DUSP2
MRPL3
OPN3
CHML