ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
PAXBP1
GOLM2
FRG2
TINAGL1
SLC39A14
COL23A1
UNC45B
KCNIP4
NPNT
ZMYM3
CMSS1
FILIP1L
TTYH1
COQ8A
FAM236B
FAM236A
LRP2
SNX16
CRYBB2
TNRC6A
ARHGEF35
SYT2
ITPRIP
KLHDC9
BAIAP2L2
NBPF1
ELMOD1
EPN1
FANK1
POLN
HAUS3
MUC1
C16orf87
MTRNR2L8
SLITRK3
ELAVL2
SPDYE14
SPDYE10P
ARHGEF5
KRTAP9-6
LOC105370980
CLTC
MTRNR2L2
MSH3
DHFR
CPLX2
LYRM1
DCUN1D3
SCGB1C2
SCGB1C1
COL6A1
MROH9
TSR2
KRTAP2-4
UBAP2L
C1orf43
ERRFI1
RABL6
TES
CCDC200
CLDN20
TRIM48
RAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOTCH2
E2F3
EREG
PDE4DIP
ECHDC1
H3C13
H2BC18
MTRNR2L1
UBE2Z
SULT6B1
TMEFF2
SUV39H2
ZNF679
PDE6D
COPS7B
ANXA2
ACTB
C11orf97
SPATA16
SLC35B1
APPBP2
SIMC1
UBC
CBWD5
IDNK
H2BC21
H2AC21
H2AC20
CTAGE8
CTAGE4
HMGA2
ANTXR1
OR1F12
PDLIM5
LOC107986453
HNRNPA3
PCBP3
SHTN1
KRTAP10-12
RPL8
ZNF34
SRSF5
ARFGEF1
YBX3
SOX5
LUZP2
NAV3
ACTG1
ZNF718
ZNF595
DMBX1
H3C15
H3C14
H2AC19
H2AC18
MND1
CHEK1
RAB11FIP2
PIN4
TOB1
SPATC1L
TCERG1
NCOA5
GOPC
PCID2
CUL4A
TUBD1
RPS6KB1
DSCC1
SMNDC1
RNASE10
FLOT1
IER3
COMT
ZHX1-C8orf76
ZHX1
ADAM15
TXNRD2
CLUL1
SLC25A32
DCAF13
STRIP1
MFAP3L
FOSL1
TCF7L2
HNRNPA2B1
CBX3
ARHGAP39
STK3
UBR5
SLC12A8
EIF3F
NFE2L1
DIRAS2
DHRS9
CD163L1
GABRA2
OR6P1
GRHL2
FBXO11
TMSB10
EGR1
PCMTD1
PCDHB5
VCP
ID1
SLC25A3
SRPRB
PRKAR1A
HECTD3
USP25
UBE2O
AANAT
H3C12
H2BC17
H2AC17
FH
CSNK1G3
H3-2
KRT19
FAHD2B
PLA2G7
RPS20
MRPS23
RAB4A
CYP2A13
ZCCHC4
PTEN
KLLN
MFSD14B
NCK1
SEC22B
FRMD3
CSNK2A2
SRSF2
MFSD11
EEF1A1
ZNF280D
ERMARD
ABHD10
EBPL
NGB
RECK
ELOVL6
H2AX
UBE2V1
LMBR1
ATF1
GALNT10
CTNNA1
DTD1
LRRTM2
CPSF6
DR1
FMNL2
BZW1
MAML1
RMDN1
NEMP2
ZFP36L1
CPNE3
RXFP3
NSFL1C
PDXDC1
TRIB1
SLC16A5
POLR2M
XPC
LSM3
MRPS26
GNRH2
OGFOD3
HEXD
FGGY
ZBTB38
AREG
CXCL2
IQCF2
AFTPH
ENTPD7
OSER1
GCFC2
C7orf26
ZFP3
SLF1
KIAA0825
TMEM71
PHF20L1
EXOC6
HERC6
BRAF
CBR3
IGFBP4
SLC5A8
CKS2
RPL18A
KRTAP2-2
KRTAP2-3
VWA2
SLTM
ZFP91
LPXN
GPD2
RCN2
HMGB1
UBE2D1
OGA
ZNF800
SMARCD2
FAM8A1
NFE2L3
SEC61A1
KANSL1
DUSP5
CEP55
LRRC58
PPP1CB
RAD21
CCSER1
CIB2
TULP4
DUX4
CBWD3
PTMA
MALSU1
HDLBP
KRTAP2-1
ANKRD18B
VANGL1
TMEM43
CHCHD4
H2BC4
H2AC6
CHD1L
SLC30A5
PLEKHA8
FKBP14
RMI2
FBXO34
SMC6
GEN1
NMI
PCDHGA1
CTAGE15
CLDND1
DDX59
EXOC2
SGK3
FAM149A
METTL7B
NUTM2D
CCDC88A
EXT1
EIF3A
SLC20A1
SCO1
ADPRM
TRIM26
FAM120B
INPP5F
XYLB
EPM2A
FDX1
PCDHB8
PCDHB7
PSKH2
WDR43
LRRC37A3
PSMC5
FTSJ3
RMND1
ARMT1
SFT2D3
MINPP1
MTHFS
RESF1
OXR1
OR8B3
KCNS1
RNF151
UHMK1
NDUFB10
RPS2
H2BC11
H2AC11
SCAF4
APEH
SIRT5
CRPPA
FBXL4
PHTF1
HNF4G
FAM160B1
TTC5
FAM221A
SLC35F3
ADAD1
DUS1L
SRRM2
NFKBIZ
MIDEAS
INO80D
NDUFAF6
ZKSCAN1
HSF1
BOP1
MLYCD
CADM2
EGFR
PCDHB13
TM4SF1
CBWD6
LRRC59
SLC38A9
SLC38A2
VPS36
CKAP2
CLN5
PROSER1
NHLRC3
GRPEL1
C5orf63
MTAP
LEPROTL1
SPG7
NFIB
MAP2
GRK3
CHIC1
ITPRID1
DAZ4
DAZ3
WASF1
CDC40
FEM1B
LOC100287896
LIPT2
NOMO3
ENTPD6
FECH
GCLM
GNAL
H3-3B
TFRC
FRG1
TTBK2
TRRAP
DYNLL2
NCOA6
TKT
GPRC5C
KRTAP4-5
ACOX3
TRMT44
HNRNPL
MKRN2OS
MKRN2
SUPT20H
KLHL7
DENND4A
WDR1
ITGA6
SH3BP5
SNX9
MAP3K21
MAEL
ILDR2
ENGASE
PCDHB2
MST1L
PCDHB3
REXO1
DHX35
TXNDC12
BTF3L4
STK40
SLC7A5
SCYL2
DEPDC4
CUL1
SPTBN1
GOLGA6L7
UMOD
WDR4
ARRDC4
CHMP7
PCLO
CDK17
KITLG
EMB
NCKAP1
LRP11
RPS19
RAB18
LIG3
EPB41
POMGNT2
C10orf95
NDEL1
PAM
RAN
USP10
WASHC1
AK4
CABCOCO1
PPP1R2B
JMJD1C
ZSCAN25
RNASEH1
FKBP1A
WDR45B
HOMER1
EXOSC7
IQGAP2
ZDHHC3
VEZF1
BFSP1
TMX4
MAP11
TMEM268
TAPT1
INPP4A
ZNF664-RFLNA
ZNF664
CCDC92
ZBTB7C
MLLT3
FA2H
PCDHA6
PCDHA5
SARDH
SEPTIN4
TMEM70
ELOC
RPS6
USP36
PET117
KAT14
TRIM25
SMC3
EHD4
SYBU
NDFIP1
PANX1
TPD52
REST
ATMIN
C1QTNF12
SPHKAP
NOCT
NFRKB
CKAP5
IMPACT
ERN1
PTK2
VOPP1
DIS3
CLK4
GEMIN4
RANBP9
EIF5A
ZFHX3
ODC1
C3orf70
PTPRA
MYZAP
GCOM1
XKR6
TMEM202
NXF1
ABRAXAS2
DDX1
CDK8
ZNF124
MCL1
TMED7-TICAM2
TMED7
KCTD18
FUCA2
LRRCC1
ARL17B
XPR1
SPEF2
SLC7A1
ASAP1
PDCD5
ATP2A2
LPGAT1
DEPDC7
SLC35G5
FAM207A
BANP
DNM1L
MUS81
CFL1
TIMM23B
PARG
UBE2J2
TRMT1L
SWT1
YBX1
CPOX
LYST
KAZALD1
GRK5
LGALSL
PCDHB12
ZNF337
UBE2B
CDKL3
DNAJC25-GNG10
DNAJC25
R3HDM2
INHBC
CLK1
MALL
SREBF1
TYMSOS
TYMS
SH3D19
CST3
IDH2
CD38
KRTAP9-2
TCL1A
STX18
PEX3
ADAT2
STX10
IER2
SLC25A36
LOC100289561
TIFA
PELI1
PTDSS1
MTERF3
DSE
ARSG
TBC1D5
PCTP
PER2
SLC16A6
PKP4
CCDC148
NDUFA6
CEP68
TSPYL4
RWDD3
CFLAR
FAM220A
MKI67
TRIM47
GMNC
KANK1
MAP3K14
ARHGAP31
HOXB9
GBP2
RORB
LAMA2
SEC13
EIF4A3
PSTK
KPNA1
GAPDH
RAD23B
MFSD14C
RABEP1
TRIM39-RPP21
TRIM39
AEN
PTS
SMAP2
TMEM65
DYNC1LI1
CXorf38
LOC100996750
KRTAP4-7
TRIP12
FBXO36
CNP
PIGO
SLC25A4
CITED2
AP3M2
MLEC
COG1
ZDHHC7
HDDC2
CD55
MIB1
PLAAT1
TWSG1
MYO5A
STEAP3
SULT1B1
MORC4
PSD3
SLCO6A1
ZFP42
SOD2
WTAP
WAPL
YPEL2
TXNDC15
PTP4A1
KDF1
C9orf85
ABHD17B
INTS6
POLR2D
TMEM229B
ELAC1
GSTO1
IQSEC3
NTAQ1
TMEM251
MOAP1
SLURP1
H3C10
H2BC13
H2AC13
PLEKHH1
GCSH
SCN8A
OTOP1
PRAMEF33
PRAMEF10
GHITM
SERP1
EIF2A
RFX3
ZNF623
KDM3A
TBCD
DBP
JOSD1
GTPBP1
MIF
MAFF
NEDD4
ARHGAP29
APBB1IP
DPY19L2
ARHGAP32
ANO2
MUC12
KRT1
PDCD4
ATP6V0B
B4GALT2
AMMECR1L
ADAR
APOLD1
NUP50
STK35
RALY
CPT2
OCIAD2
CA8
MPP7
BAG3
PXK
SPOPL
SPX
KRTAP4-12
SLC12A5
TBC1D3H
TBC1D3G
ZNF80
CASR
BOD1
MMACHC
TIMM23
C7orf25
KMT2E
DDX42
CCDC47
KLHL9
DDX17
SMIM19
SLC20A2
TEX9
CEBPG
ADI1
RFX7
MTUS1
TAB2
BACH1
ZBTB34
TDRD7
REEP3
PITPNC1
UNC79
BTBD7
CMTM7
EIF2D
NKIRAS1
NFYC
KBTBD8
ERI1
SRRT
TMEM109
CENPS-CORT
CENPS
CUL7
OAT
STRIP2
MAGI3
BLCAP
GNPNAT1
PARD6B
PANK1
NR1D2
TOMM34
PRDM2
RNF32
BCAP29
EFR3A
TLK2
AXL
DSG2
NANOS1
PATJ
ARHGAP42
CYTL1
RPL35
ARPC5L
RBL2
DDT
C1orf53
SETD3
CCNK
MBTPS1
KRT8
ELMO2
GLRX2
HSBP1
KRT18
TBCEL-TECTA
TBCEL
DBNDD1
DHRS13
TXN
ZNF441
RTKN2
BRD3OS
MAP3K5
JAK1
GAS8
BTBD3
SMCO4
HTATIP2
SRCIN1
PTPRD
ADNP
PARK7
C5orf51
GORASP2
ATXN7L2
MAP3K7CL
UBE2L3
AZIN1
CCT8
OTUD7B
UBN2
BORCS5
KPNA2
TNRC6B
GGCT
SPTLC2
NUDT18
ITSN2
POLR2K
FBXO43
PKD1
FAT1
ADNP2
ALOX5
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ZNF462
CYP51A1
RAD54L2
SLMAP
RUBCN
AMOTL2
AGK
ZFAND5
HNRNPD
RPL14
ANKRD36C
MCMBP
SP3
NPM1
HESX1
APPL1
EGLN1
SLC39A8
NCOR2
SERPINB9
MICALL2
COLEC11
LRP5
CDYL2
PDE8B
TSPYL5
BMP4
P4HB
PCYT1A
HNRNPUL1
RCAN1
SAAL1
PPP2R5A
IREB2
NUDT4B
NUDT4
PUM2
FBXL5
TPGS2
TGFBR2
ACTR5
ENTPD4
HELZ
ARSB
FZD6
SEMA7A
KRTAP10-2
CLEC4C
SPHK2
RPL18
FAM83E
NBN
PTPN4
TEX46
KDM1A
MSL2
FBXW4
SDCBP
SUGCT
MPLKIP
PTK2B
CCZ1
PITX3
GBF1
TRIM35
UQCRFS1
TRIB3
ANKRD36B
NMT2
HYOU1
SLC38A10
NUDCD2
HMMR
CCDC149
ORAI1
FBXL13
ARMC10
CCSER2
PKD2L2
MOXD1
HSPG2
HLA-B
PCDHB10
CPXM2
UBE2D3
AKIRIN2
ARNTL
PRPF19
SNX19
RPL13
THAP12
GVQW3
IPO8
NUFIP2
MMAA
GLCE
STAMBPL1
SCOC
NFATC3
ANKRD46
AGO3
TERF2IP
KARS1
SYNCRIP
MAPRE2
RPE
PARP8
TMED3
PM20D2
CASD1
ROCK1
IMPA2
MSRB2
PARD3B
HYI
MYEF2
CTXN2
FSTL1
SNPH
HEG1
SLC45A3
C10orf53
KLHL2
DDIT4L
CTAGE6
KLHL41
SLC25A52
ACCSL
FOXJ3
CTDP1
RPL6
PTPN11
RNF103-CHMP3
RMND5A
EHBP1
SZT2
MED8
YWHAZ
BTF3
TWF1
CMTR2
PLEKHG2
RASAL2
SEC24D
SFXN1
GALNT7