ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637469 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◣ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CDCA3
TMEM115
IFRD2
FEM1A
TCEA2
CALR3
C19orf44
SMPD3
TSNAXIP1
RANBP10
BTRC
MRPL24
RHEX
MMACHC
NUDCD1
PHB
CLPB
PRCC
AP2S1
ATP2C1
KBTBD6
C1orf159
FRG2C
ST3GAL2
KBTBD7
PI16
PNKD
AAMP
NFE2
GSPT1
HHIP
PAFAH2
GTF2H4
PKIG
ING3
SCNM1
LYSMD1
AGBL1
MICOS13
HSD11B1L
CHMP4B
PPIAL4H
PPIAL4G
PHF12
EMILIN1
TOX2
SLC4A2
CDK5
PLCL2
CCDC146
ZFYVE1
WDPCP
MDH1
BANP
WDR74
AHCYL2
NPRL2
CYB561D2
ZMYND10
CYTH1
INTS9
HMBOX1
BOD1
PPP1R16B
UBR2
PCDH10
C3orf86
PEMT
NKAIN4
FARSA
CALR
LZTFL1
PPRC1
MAD2L1BP
GTPBP2
SCAF1
RRAS
CST5
TMEM11
PPP1R12C
SLC39A1
CRTC2
LTB
LST1
CCM2
RUBCNL
ALDH1A2
ZNF331
STK17B
GRAP2
PARL
CHCHD2
STATH
SRPK2
STAU2
GNA15
NFRKB
ZNF225
ARHGEF7
CD300A
IQGAP2
ZNF444
H3-3B
UNK
UBQLN4
LAMTOR2
SUFU
ACTR1A
PPAN-P2RY11
PPAN
ANGPTL6
VCPIP1
C8orf44-SGK3
H2AZ2
BAIAP2
NTAN1
ITGA4
RBL1
KCTD9
CDCA2
CD1A
APBA2
CR2
CXCR4
DGKA
PYM1
PHF13
CTU1
TMTC3
CEP290
VIPAS39
AHSA1
FXYD2
HECTD1
OR4D1
TSSC4
DSTYK
SLC35B4
PTPN6
C12orf57
TESPA1
PANK4
HES5
PPIAL4F
PPIAL4E
PPIAL4D
GATB
CD1B
INVS
ERP44
MSL2
GSR
PRKD2
ACADM
KMT2B
FMNL1
ZNF337
SHQ1
NPIPB15
SLC2A6
SCGB1C2
SCGB1C1
ODF3
TLR9
LSM4
GFRA4
EPHX2
SYMPK
FOXA3
VPS50
HEPACAM2
DCLK3
ADA
TIMM21
FBXO15
PSMF1
DDX23
NBEAL2
FBXO48
APLF
BIRC5
FAM193A
ZSCAN22
LARS1
DCAKD
NMT1
PVRIG
RIC8B
MDM4
ZNF784
DUS3L
OR10T2
ARHGAP24
LAT
BHLHE23
FBXL19
SEC14L2
FBXO46
MEIOSIN
RANGAP1
GFUS
RGL4
PPP1R12B
CD69
MAP1LC3B2
ZNF718
ZNF595
ZFYVE19
DNAJC17
WNK1
LDLRAD4
RABAC1
KRTAP16-1
PYGM
RHCG
TNFRSF13B
HDAC7
KANSL1
FBXW11
N4BP2L2
MED23
RPS7
NAPA
TMEM107
JOSD2
ASPDH
CCDC90B
ZNF500
C16orf91
FRG2
MND1
ITGA6
NUF2
TNFAIP1
IFT20
GPKOW
UTP3
RAB37
SOX17
TMEM70
ELOC
EMP3
CCDC114
PRPF40B
BNIP3L
H6PD
TAS2R50
APBB1
TGM6
THYN1
ACAD8
MX2
ABCF2-H2BE1
ABCF2
CHPF2
RCSD1
FNTB
ABHD12B
SOX6
C11orf58
LAIR1
TNFRSF4
GSK3A
TRAF4
TRIB1
SLC12A6
LEF1
AFF3
ASB2
RETNLB
THEMIS
SCRIB
FGR
TFEB
FMO1
SNX17
EIF2B4
HRH2
SSBP1
STK25
FAM3B
BUB1B
PEX14
DFFA
SYTL2
SMARCAL1
SIRT2
NFKBIB
POLDIP3
CHCHD3
RPIA
IL17RA
BORCS7
HSPA13
COX7C
RFX8
CAPN15
ZNF165
ORMDL3
CDK8
SIRT4
TSC1
GFI1B
AP2M1
DRC7
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NSFL1C
PEX3
ADAT2
DESI2
UBE2J1
PRRG2
NOSIP
ARHGEF3
SLC47A1
ZNF140
TRAF3IP3
PTCRA
ZNF354C
DEGS1
LMO2
MRPS18C
HELQ
MYO1G
TMEM245
RTTN
ERAP1
ARHGAP4
ICAM2
SLC33A1
H4C12
TES
STAU1
ERGIC1
SPATA46
CANT1
ZNF335
FAM222A
MFAP4
ALG10B
RPGRIP1L
FTO
FOXN1
AURKAIP1
CLEC16A
DEXI
NME1
SERHL2
MZB1
CDT1
ZNF230
MED15
ZNF354A
COPS4
GDE1
CCP110
DDX4
PTK2
SMCO1
SLA
GP5
PEX26
SMO
FASTKD1
CDK5RAP3
TTI2
RCAN1
ACSF3
TMEM59
TCEANC2
GZMA
MRPL1
ATP6V0A1
TLE3
KRR1
EVL
CBFA2T3
SYT12
UBE3C
TNFRSF1A
IPO4
NCOR2
CDK5RAP1
EIF3F
COL6A2
LGMN
NEIL3
PHF19
TFPT
PRPF31
ATP11B
ADORA2A
HEMGN
CXorf49B
CXorf49
ATXN7
CFAP20
RUFY3
NSMF
INTS12
GSTCD
WDR87
SIPA1L3
MTF2
SMAD7
PALLD
SF3A3
EVPL
FIGNL2
TPGS1
COX16
RPS20
REPIN1
FHAD1
BCL9
ETV3
BCL3
PLCG1
GPANK1
CSNK2B
C6orf47
LY6G5B
PHF23
GABARAP
DVL2
ATAD2
EPHA1
TTC13
ARV1
D2HGDH
MKRN3
ZNF749
TBC1D21
ASXL1
AQP3
ZNF133
FAM185A
TRAPPC3
TTC33
CCDC150
FCGR2A
DUX4
THBS4
SNAPC3
WBP2
CCND3
TAF8
MMP9
DYNC1I2
STAP1
ZNF56
ZNF408
ARHGAP1
NET1
TBC1D10C
TTBK1
C8orf58
CCAR2
TRIP4
RAB1A
RPP40
FOXP1
RBM38
FAM228B
SF3B6
NDUFS7
SLC25A19
TJP1
CCL1
AKIRIN2
CD3E
ALG10
ASPRV1
IRX2
C5orf38
CCDC200
TMC6
TMC8
TMEM45B
TMEM101
SPC25
PTDSS2
VOPP1
RIPK4
ZBTB45
OSBPL5
NFKBIZ
ZFYVE21
XRCC3
TLR6
TRIM47
ARHGEF18
FCRLB
EPSTI1
PLAAT5
PSMD11
POMT1
TBC1D31
ZNF350
RLN1
BLK
DHRS11
BRF2
CCNG2
RASAL3
ARHGAP9
MARS1
ZNF224
CSTA
ARID3B
DUSP2
CHMP7
SNRPD3
GUCD1
BICD2
TTF1
MAMSTR
NR1H2
CTDP1
CISD3
RORC
NOP16
HIGD2A
ADAD2
SLFN12
CIC
VAT1
ZMAT5
UQCR10
LCK
GUK1
DBNDD1
ZNF354B
MAP3K8
TMEM127
CIAO1
NUCB2
RPL18A
C19orf53
ZNF227
PPIP5K2
CLP1
NUDT13
ZNF226
PA2G4
REXO4
ADAMTS13
CD82
NOP14
GRK4
MYLK4
ASAP1
TLE4
CACNA2D4
TNPO3
CNOT4
BUB3
YIPF2
TIMM29
IDNK
CYB561
ENOX2
SH2D3C
SNX1
CIAO2A
PNLIPRP3
CHST12
RALGAPA2
MBNL1
TMEM229B
MTMR9
MEN1
SUPT4H1
ZNF652
DPP6
DCP1A
ZNF169
RPS26
ZFYVE28
CFAP99
AFF1
ZNF101
ATP13A1
PEX5L
BPI
LTA4H
GNG12
JRK
NYAP1
WDR24
ASNS
ACOT7
MSH5
CLIC1
DFFB
CEP104
RPL23A
RAB34
SUGP1
MAU2
H4C14
THAP11
NUTF2
CENPT
PTPN3
SLC17A7
SMUG1
ZSWIM9
LIG1
RPS13
MKNK1
IFIT3
USP48
ZCCHC8
KCNA2
STX18
RBM6
NUP107
TMEM163
CXXC5
DLC1
HIF1AN
FKBP5
RPL29
LRFN3
GGA2
PDE6D
COPS7B
NDUFS3
KBTBD4
ZNF527
TOR1AIP2
TOR1AIP1
ESCO2
CCDC25
S100A4
S100A5
S100A6
SCML4
CDK5RAP2
MRPS31
ZNF548
HIPK1
LSG1
ZNF343
TFAP2E
RPL27
ZP1
TMEM258
FEN1
TCF7
GALK2
COPS2
VPS41
ADGRE2
MAX
TSC2
NTHL1
RNF166
OSCAR
NDUFA3
H4C3
H1-6
ARHGEF1
STK4
AGPAT3
NPY4R
NPY4R2
ATP5MF-PTCD1
ATP5MF
GFM2
TMEM41A
KCTD5
PPP1R18
UBAC1
AGK
ZNF821
FAM168A
ETFDH
C4orf46
LIG4
DOK2
NANOS3
CLDND1
CYP2U1
MRPL30
MITD1
DEK
ZAP70
ZNF420
SWI5
GOLGA2
STING1
IL23R
NIBAN3
DNM1L
SEPTIN9
MYL6B
SDE2
ZNF37A
RTN4
PCNP
FGF11
TMEM102
MLEC
ZNF688
GTPBP3
ANO8
FNDC11
FDPS
ATP2A3
ADD3
ITGAL
STMN3
RTEL1
SBF1
LRRC29
DAAM1
TRAF7
C17orf75
LMNB2
PRKCI
ING4
RBBP5
SMIM33
XPNPEP2
ALKBH3
MICAL1
LYST
TMPRSS13
PANK3
AOAH
IFNA1
ZGPAT
ARFRP1
ITGB3BP
EFCAB7
RALBP1
AQR
GABPB2
USP30
CCNI
XPC
LSM3
GPR160
C16orf54
ZW10
MGRN1
RNF125
ZNF329
RAB30
KIAA0408
IFNB1
PIGU
SLC39A3
LRRC1
DPY19L4
MRPL44
SNRPB
GPR157
HEXIM2
FAM207A
ATP5F1D
CBARP
SUPT7L
SLC4A1AP
MTRNR2L1
CD2AP
ZC3HC1
LRIG1
NR4A2
CPE
DLX5
CLTC
ARHGAP45
NOTCH3
ENTPD4
TOX
TOMM40
ADGRG1
NMT2
H4C15
ZBTB7B
PIH1D2
NKAPD1
ATP6V0E2
NRDE2
AAR2
NDUFB3
FAM126B
ADAMTS1
PSD4
PNPLA6
TAB2
ODF3L2
YPEL3
TBX6
CCDC15
CAPG
LMNA
PPP5D1
CALM3
SLC7A8
NCLN
IL21R
LETM1
RUVBL1
KBTBD8
MFSD3
GPT
VPREB1
RAB5C
VKORC1
TUT1
CNN2
ZNF189
MRPL50
WIPF1
SLC26A11
CST7
SMIM41
CD59
C12orf43
CNIH4
DHX33
EMSY
TRRAP
MAIP1
NUMA1
LRTOMT
MYO18A
TMEM160
LTN1
PSENEN
LIN37
LPAR6
PPP2R5B
S100Z
NUP54
ARHGAP19
DRG2
LIMS1
RBM28
CASP8
ZNF570
ZNF569
RAB27B
DHX8
SOAT2
PUM3
ZSCAN5A
ATG9B
ABCB8
TULP2
NUCB1
SH3BP5
ZNF605
BMS1
GTF3C2
KLHL20
KIF15
KIAA1143
GRHL3
HSCB
CHEK2
LOC388282
PLEKHF1
FBLN2
DCAF10
MUS81
CFL1
SELENOH
NOP53
SIT1
NCR2
THRAP3
MRPS23
SF3B5
DGKZ
PEAK1
HMG20A
LIMS4
LRP6
ZNF805
LAX1
TCF3
ADGRE1
DGAT1
STX1A
SLA2
IQGAP3
ZCCHC4
TMEM199
POLDIP2
MTBP
MRPL13
ARHGEF2
DMBT1
ZNF451
ZNF277
DOCK4
TM7SF3
SEC11C
STK16
CD46
GLB1L
CLN3
APOBR
ZNF175
B3GNT3
ATP5PO
CTF1
BCL7C
CCDC97
GPR137
SMG8
CCDC88B
EIF4A2
UBE3B
KCTD10
GCSAM
CDCA8
C1orf109
UCK1
C15orf62
CDH4
DMAP1
ZNF45
CXCR3
ABCG1
MRPS16
POLR3B
SVIP
ASCL4
TMEM178A
TTC4
VRK1
GRK6
ZNF563
EMB
TARBP2
MAP3K12
STARD10
TERF2
TM9SF4
PHF20
CD3G
CD3D
WRNIP1
ZNF32
PTPN22
KCNAB2
CUEDC1
NAGLU
SERPINI1
PDCD10
SYTL3
LIME1
ZNF235
ANKRD40
RACGAP1
CWC22
ATL2
TMEM123
DNMT3B
RNF151
TBL3
COMMD2
ZNF276
VPS9D1
PTPRCAP
ARHGDIB
GAS7
MFSD2B
GSTA4
TRAK2
STRADB
CDC14B
LOC101059915
SUCLG2
METTL7A
CALM2
TRMT6
MCM8
WDR83OS
WDR83
MAN2B1
ANAPC5
SAMD3
UBL7
L3MBTL2
STAT1
UTRN
EML6
GOLGA3
WBP1
INO80B
SDCCAG8