ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FLOT1
PLCB2
NADK
LAPTM5
NCOA2
HMGCS1
PPCDC
SKIL
ARHGAP4
UNC13D
CD38
MTRNR2L2
LCOR
C5AR2
GFOD1
NIBAN3
SERPINB1
DHRS3
SPATA1
GNG5
CALR
MTRNR2L8
SREBF2
PCNA
CDS2
ARHGAP45
RASGRP2
DZIP3
CIP2A
MBD6
MAP2K3
FGR
INSIG1
COX20
MYO1G
MYO1F
IDH1
UPF3A
ARIH2
P2RY2
RPS6KA1
CENPH
KRI1
ZCCHC24
NFKBIA
NRL
DCAF11
FDFT1
FDPS
MKLN1
NFIC
KAT6B
SSH3
NLRP3
LYL1
ICAM1
BAZ1B
DENND4B
RASSF2
SLC25A19
EXOSC4
C16orf54
RBM15
C11orf91
KAZALD1
DRAP1
C11orf68
PSMD3
DNAJB1
PKN1
POC1B-GALNT4
EMP3
MSMO1
KRAS
KEAP1
ZNF740
CSAD
SNX15
FADS3
SEC14L1
CTBP2
RARG
INAFM2
LYST
GHDC
CEBPE
CYBA
BHLHE40
RAB11FIP1
MRPS31
RAB3D
SREBF1
ARHGEF18
BIN2
SMARCD2
ADGRG5
EPM2A
TBL1XR1
HUS1
NDUFA4
PIK3AP1
PACC1
SMIM20
AGTRAP
LRMDA
CDCA7L
HMGCR
PDE12
EVL
NPEPL1
H4C11
DUSP10
TCTEX1D4
BTBD19
GRK2
PTPRCAP
SLC35D1
NOL4L
E2F3
SLC22A18
LST1
YARS1
S100PBP
FERMT3
NR2C1
P2RX5
IMPDH1
UBE2E1
MTRF1L
CFD
AP2S1
CSK
TM4SF19
ALOX5AP
KRT8
ARRB1
CYP51A1
SH2B1
ANKRD13D
RAP1GAP2
AHNAK
CCDC174
ASB1
EVA1B
PLIN2
MYBPH
HSP90AB1
SQLE
HIVEP1
TANK
JUP
NINJ2
RAB37
TRIB3
ANP32E
ADGRG3
DUS1L
GPCPD1
NCF1
ZNF746
RBBP5
GBE1
SMCHD1
UROD
HECTD3
WDR43
ARL4A
CD1D
IFNGR1
PKN2
ATF3
PIKFYVE
ANKRD10
MCRIP1
TPRA1
H4C15
H4C14
MAP3K8
PEAK3
RMND5A
PWWP2B
TAGLN2
RCAN1
TBC1D10C
SMG6
UMODL1
CTTN
SLC1A5
SLC12A6
C12orf75
SLC16A3
ETFBKMT
ZNF414
DENND2D
SIPA1
TLR9
CPSF4L
CTDSP1
MPG
PLEK
SH3BP2
GPR160
PPP2R5B
SELPLG
ICAM3
MINDY2
RARB
PDE8A
CDK13
SH2B2
ADRM1
SEPTIN9
C3orf86
TRAPPC5
NKIRAS1
NR1D2
SH2B3
H4C9
S1PR4
GMIP
MTRNR2L9
OPA1
PDCD4
CAPS2
BAZ2A
ATXN7L2
LRPPRC
LDLR
DENND6A
GFI1
S100A2
TMEM101
ZNF217
PCYT1A
SCD
AXDND1
FBXO41
ACACA
CTCF
LOC388282
H6PD
ATP2A3
TSPAN32
C11orf21
GPR132
PCNX3
PPARG
WNT10B
TRPM2
TREM1
RBKS
BABAM2
GPATCH8
KBTBD2
MVK
POM121C
SLC17A9
P2RX1
PRTN3
MYADM
KLHL24
LY6K
CCDC154
RGPD2
RGPD1
STEAP3
PHF19
CLTC
NCOA4
ZDHHC17
NAMPT
KCNAB2
MTHFR
CLCN6
NDRG2
CCDC9
LZTS2
PRNP
IRF2BP1
LONRF3
CHPT1
MICAL1
VPS72
BPI
MPO
TRIM11
OGFOD2
ICAM4
PLEKHA8
PRKCD
MTF2
PMPCB
UBE2J1
TMC8
TBC1D14
PTCD1
CPSF4
ATR
ZGPAT
ARFRP1
TAF1A
HBP1
LINGO1
H4C13
QPRT
COPS7A
MFAP4
TEX2
C19orf53
DOT1L
QRICH1
HSPH1
FRA10AC1
LPCAT3
STK35
ZNF584
NOG
ADM
KMT2D
STK3
PPRC1
BORCS7
CAMP
VIPR2
TFAP2A
ZSWIM9
LIG1
LIMD2
PIP4P2
CPQ
NUDT15
H4C4
PLEKHA2
GOLIM4
MRPS15
ITPRIP
MYO18A
DOCK2
IQGAP2
LZTFL1
KLLN
SRF
MAPK12
SPN
NTSR1
LRRK2
KANSL3
ZNF846
BANP
NEURL2
CTSA
RNF149
FKBP5
EP400
TNFRSF10A
ZNF76
CCDC59
RIOK3
FRAT1
EPS15
SKIDA1
SNUPN
LMNA
MAFG
FBXO6
FCRLB
SP1
LSG1
CUL2
UCN2
C3
ZDHHC4
DYRK1A
IFRD2
KCNE1
DMAP1
MIEF1
C5AR1
NDUFS7
DUSP6
ING1
SPRING1
RNFT2
MAP1LC3B2
SC5D
NIT2
LTA4H
UCP2
NFIA
VDR
GDPGP1
CIB1
UBR4
APBB1IP
UHRF2
PIM3
C15orf62
ATXN2
DHX33
PEX5
AFF1
YWHAQ
ATP11A
EVPLL
HDDC3
CNOT2
H4C12
CLIC4
CHD9
CDC42EP4
ZNF317
RBPJ
MFN2
TM7SF3
HSD17B7
RWDD1
KMT5A
POLG
TMBIM6
TBL2
AHCYL2
UBC
ZYX
SREK1IP1
CWC27
MLEC
DNAJB2
TPD52L2
BCAT1
CCL5
PRSS57
CCNL1
PSMF1
STING1
NOTCH1
DAGLB
PGLS
ENO1
SMAD3
TBP
PSMB1
COMMD4
SETDB1
SCAP
MAPK8
DNAJB12
TRIM14
NKG7
CCL3L3
CCL3L1
CCL3
PARP2
B2M
KDM3B
MRPL24
SLC25A15
FCN1
HMGN4
MRPS23
PHETA1
MTRNR2L10
FOXP1
SCAMP4
ADAT3
EIF3G
ANKRD33B
OGA
DYNC1I2
VAV1
NSA2
GFM2
GCDH
OTUD7B
MDM2
ERLIN2
RAD54L2
MAD1L1
RFFL
THEM4
ALDH3B1
PHLDB1
PTPN7
CYB5R4
SLC35E2B
ZFAND3
WDR18
LFNG
CRACR2B
PGPEP1
PSMD1
STX18
PEX14
RNF139
TSC22D4
OSM
PRDM10
PTP4A2
ARPC1B
ATP11B
ZNF350
BAG6
SLC25A18
TRIP4
MFSD8
ABHD18
NUTF2
CENPT
CD63
SH3BGRL3
PLD6
GGPS1
ARID4B
DUSP11
CDC42EP3
PA2G4
EIF1AD
BANF1
IPO4
GIT2
SYT7
SH3RF3
MTMR4
RPL22
ANPEP
SH2D3A
PNO1
LSM5
ST3GAL2
TRIM38
LNPEP
RAB20
TRIB1
UGP2
CCDC130
RBM7
C11orf71
SUSD1
GLUL
CXCR3
NMNAT1
LZIC
EMC8
COX4I1
PDPR
RASSF4
SIDT2
C7orf26
STRIP1
PHF12
CFLAR
DBP
CLDN12
THRA
ZNF503
GBA
RCOR3
TES
ZNF775
TMEM167B
U2SURP
RIPK1
ABT1
ZNF140
ANAPC5
PRELID3B
DPP8
PGD
NDRG1
BSDC1
ATP5MF-PTCD1
ATP5MF
GHRL
CAST
WT1
AZIN1
DDX23
BCL3
DOK7
LGALS9B
PKM
LPXN
ZNF609
DENND5B
SEPTIN2
HDLBP
EEA1
USP36
RBP4
PRXL2B
ETV6
SIRPB2
PROSER1
NHLRC3
RASSF5
REPIN1
NEK2
HIKESHI
INHBE
RAP2A
ZNF862
SYK
CCDC146
ZNF652
KDELR1
ZNF577
CCDC144A
DYSF
CDKN2D
RPLP0
USP8
SLC25A16
TMTC3
CEP290
CSRNP1
SF3A3
HEXA
POM121
MIDEAS
RRAS
GTF2B
PEMT
HMX3
LPAR2
FAAP24
CEP89
NUF2
CASP9
LONP2
ABCC11
WASHC2A
MFSD10
SKA1
QPCT
SLC41A3
GGH
SLC22A15
ARSG
LAMP1
EBAG9
SLC16A6
TFAM
MRPS17
DOK3
PLAUR
CYP1A1
SIRT1
SLC3A2
NDUFAF3
DALRD3
PPP3CB
AMN1
HELZ
KBTBD6
OCIAD1
ABHD2
COQ10A
RNF168
DRG2
FZD5
PRCC
SOD2
WTAP
MRPL4
CES1
C11orf24
CD164
MST1
ARMC1
IGF2BP3
PFN1
NT5C2
CD79A
HMGB1
USPL1
LYSMD2
PTRHD1
CENPO
NHLRC4
ASS1
C1RL
ZNF318
PLBD2
COX19
ITGB2
SNRPB2
EIF4EBP1
ITPR2
PPARGC1B
ACAT2
DDIT3
SH2D4B
CDK17
CCDC186
YTHDF2
RNASEH1
UPP1
ZNF212
PLEC
NUDCD1
N4BP2L1
SHLD2
GLUD1
PXYLP1
ARID2
CCDC90B
SH3TC1
EFCAB14
MTMR6
ZNF385A
MFSD14A
DUSP14
SPOCK2
TPCN2
TRIP6
THUMPD3
GGA1
SPI1
TMEM248
ZNF337
CHD1L
AIF1
SMG8
POLD3
TRAPPC10
GALK2
COPS2
DPH1
SCP2
ANXA2
RETN
VIRMA
NR2C2
DHCR7
RPP14
HTD2
ZFP1
FBXO31
ARID5A
RFESD
SNAPC3
MAP1LC3B
TRAK2
STRADB
SH2D3C
ARL8A
MAD2L1BP
CCDC114
SLC22A4
HEXIM1
CD55
PCCA
AQR
CAB39
ACSS2
MXI1
CLK2
UNKL
ATP2A2
DDIT4
P4HA1
NOLC1
FAR2
UBE2Q2
NDUFB6
NEK6
RPS12
PCTP
ZCCHC3
CYTH1
ADORA2A
CLUH
C2CD5
INTS6
CHI3L1
MACROH2A1
NBPF1
EDEM1
HECTD1
DHRS12
RPF2
RAB44
ATP23
TXNRD1
UNK
VPS50
HEPACAM2
SAMD10
RALB
TUBA4B
TUBA4A
LRRC25
NPAS1
SLC25A36
SLC26A11
SGSH
CYP20A1
MAST2
NUDT9
GSTO1
REL
WDR48
SCN11A
ESYT2
SLC35C1
KRR1
ZNF687
NOTCH2NLC
ITGAL
NPRL2
CYB561D2
NRIP3
TTC26
TMEM242
ARHGEF2
SCNM1
LYSMD1
CLDND1
ELOVL3
FOXD2
SEC61A1
SFMBT2
FNDC3B
STK38L
NIBAN2
PLK3
TRIM25
DCK
PACRGL
TUBGCP3
NR3C1
SLC24A1
INTS14
QTRT2
CCDC191
SDE2
TMA16
S100A9
DOC2B
CCNDBP1
BOD1L1
INTS10
DCAF8
MEPCE
USP35
KCTD21
SLCO4C1
THYN1
ACAD8
PIP4K2B
DYNC2I1
YES1
PIDD1
HIPK1
PLAC8
RBM28
MDK
SLMAP
PYROXD1
KIF21A
SRXN1
AKAP9
MC1R
ZNF3
CRLF3
KNSTRN
LMBR1
DCTN1
CITED2
IPO13
LOC100289561
UBALD1
ZNF335
RABL2B
RABL2A
MAPKAPK5
NME6
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PAK1IP1
C6orf52
UPF2
PES1
SKP1
IRGQ
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
SART3
IQCG
DPH6
VARS1
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PTGES2
PIN4
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7