ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◣ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
POLR3F
DZANK1
IPO13
DYNC1LI2
CACTIN
EFTUD2
CCDC103
NME6
NUP205
MAPKAPK5
NEUROG3
PSMG2
CEP76
SUDS3
RPL21
NUP85
MRPS7
GGA3
VDAC2
NVL
HSPA9
DCTN1
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
RBKS
BABAM2
POLR2E
ATP5MG
C19orf48
SEC61B
ALG2
PAK1IP1
C6orf52
SMC2
EXOSC5
BCKDHA
SRD5A1
IRGQ
ZNF576
ACTR10
MRPS5
NCLN
TMED1
SLC35B1
COX7A2L
TTC8
TSN
PI4KB
NEUROG1
PNO1
FARSB
PDAP1
BUD31
LYRM4
FARS2
GOLGA5
ADK
AP3M1
PES1
BLCAP
SUPV3L1
VARS1
C17orf80
FAM104A
REXO1
IQCG
RPL35A
RPS23
ATP6AP1L
EIF4ENIF1
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
SELENOF
HS2ST1
RBBP5
ISCU
SART3
NDUFA4
USP1
ANAPC7
PSMD12
ICE1
UFM1
PCBP1
TMEM70
BAG6
PROSER1
NHLRC3
OSGEP
APEX1
PAF1
MYRIP
SF3B3
COG4
ATOH1
RABGGTB
XPNPEP3
ST13
ST18
PTGES2
CABIN1
RPS12
PIN4
VEZT
FGD6
ZGPAT
ARFRP1
RPS29
LRR1
NDUFA10
RPS27A
CLHC1
EIF2S3
RBPJ
DDX39B
BNIP3
GADD45GIP1
RBL2
RPL7
RDH10
HES1
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
PCBD2
LPIN1
GPR108
DTNB
ZNF746
HSPA1B
ANKLE2
NEUROG2
SHB
GADD45G
MRTO4
EMC1
ACOT2
PDE12
SEC11C
STK36
RNF25
PRUNE2
FGFRL1
CCDC92
CCNDBP1
PDHX
APIP
PMAIP1
HESX1
TLE2
SKIL
RYBP
AXDND1
GTF3C4
DDX31
ARHGAP11A-SCG5
ARHGAP11A
NKIRAS1
NR1D2
APLN
ZNF704
ALKBH5
TPRA1
ZNF383
SUCLG1
PLA1A
RPN1
SPIN1
TIGD1
EIF4E2
CDC73
MAST2
ID2
ACOT1
GABRB2
TLE3
RARA
UBE2I
GLT8D1
SPCS1
DLX4
OAZ3
MRPL9
UPF3A
SRSF11
LRRC40
GSR
S100A10
CNPY2
LIN28A
RAN
RTL10
GNB1L
FOXP1
BFSP1
CERKL
MELTF
HOXB9
RIMS1
NEFH
RUNX1T1
RSPO4
RBBP7
METRN
CDX1
B3GNT4
AP1B1
CALM2
PDHB
PRSS47
GSX1
GC
TBC1D8
TMPPE
GLB1
DUSP4
GATA4
LCOR
PKDCC
MKRN2
KAT6B
RPS10-NUDT3
RPS10
UBXN11
CD52
KIF21B
MTCH2
ADM
APBB1IP
C15orf61
DUSP14
CCDC174
DDX3X
TNFRSF19
OTP
PCLO
KAZALD1
SERTAD2
LPCAT3
SMARCA4
MRPL38
KMT5A
BICRA
RNF207
GTF3A
CIAO2A
CPVL
CHN2
STRADA
GRHL2
FOXP2
KLF17
SNRPA
C19orf54
EIF4H
NRDE2
IRX4
OTUD7B
C16orf91
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HNRNPD
MEF2B
ZNF891
ZNF10
SEPTIN2
HDLBP
TCF7
PAH
SMAGP
ASCL1
UROD
HECTD3
REC8
SCAMP4
ADAT3
NCOA2
KMT5C
H3-3A
RNF32
CNR1
PLEKHA6
RARB
SLC30A4
TCHP
KCNJ4
CLDN15
VENTX
JAKMIP1
WNT3
NEURL2
CTSA
ZNF395
ATP6V0A4
MACROH2A1
DYNLT1
JAK1
NR2C1
TAS2R7
RPS24
SLC25A6
USP17L15
ZNF397
METTL11B
PCTP
JUP
BRWD1
CD24
CEMP1
SEMA6D
FAM53B
STX18
MARVELD3
KMT2A
NRG1
SH2B1
CDS1
EOMES
PEX14
MEPCE
ZCWPW1
MECOM
RUSC2
ESRRG
CYP26A1
COX5A
BEND4
FBXL4
SERTAD3
MAPRE1
MAPK12
SOD2
ACAT2
ANXA9
EVC2
SH3YL1
ACP1
KCNS3
AKAP10
HINT1
MDM2
NELFA
PRELID3B
BAMBI
ADAM17
PLXNB1
ERI1
UFSP2
TARBP2
PRKD1
RBBP8NL
ROGDI
ACYP1
YTHDF2
ZC2HC1C
ZBTB25
ZBTB1
CDC42EP3
PKIB
NANP
PRDM10
TRAP1
ZNF248
CNOT2
CS
KDM3A
LIX1
DNAJB5
CENPBD1
CTF1
BTBD3
PFN2
MRPL34
ABHD8
KDM7A
SLC40A1
METTL27
IKZF2
CLGN
CDC42SE2
ZSCAN30
KDM4C
BBS9
MINDY2
KCNQ4
TMEM54
ING1
KAT6A
SS18L1
PSMA7
SGK1
RBMS3
PIGU
PTPRG
CLK1
FAM162A
CCDC58
CTSZ
RPS3A
PXYLP1
CPLX1
ZDHHC17
DHRS3
CCDC59
GATD3B
GATD3A
DONSON
INSM1
PDE4D
CTBP2
ACTR6
ACTB
TMEM211
GLI1
ZNF341
MDK
EIF5
RGPD8
RGPD5
PEX2
BCO2
KLHL4
RAPH1
ZNF485
SBNO2
SNX3
ABCC6
HSPA4L
ZBTB17
NOL4
SRSF10
ZBTB20
HIC2
EPS8
WDR7
LAD1
PPP1R13B
RPS8
CMTR1
SYDE2
NAA40
TRIP12
FBXO36
SLC11A2
ZFAND6
RILPL1
CLCN3
NPNT
TTC21B
IGFBP2
RHOBTB1
PDE4C
MTRNR2L8
MTRNR2L2
SPATC1L
FLOT1
SP2
HOXA4
NDUFS7
TTI2
WDR74
HOXA2
DNM2
P4HB
TEPSIN
NDUFAF8
NPAS4
TBX2
RAB5B
KANSL3
ZFHX3
DOLPP1
CAMTA1
CBFA2T2
SP5
ATF6
TLE4
ANK2
KATNB1
PANK2
FRA10AC1
ZNF687
PGK1
HUS1
SMARCD2
RFX1
XKR7
DUSP6
MTMR4
QPRT
NRL
DPP9
TBX3
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
ARRDC4
NFKBIA
ARSG
HOXA3
IQSEC3
POLDIP3
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
STIP1
ATP5F1B
SLC45A4
CBX3
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
MTF2
PPP6R3
KCNAB2
POLG
PKN2
KNL1
HEXIM2
DAGLB
SHF
MLEC
ANKRD28
FBXO31
CCDC43
SACM1L
SMG6
PRMT5
EIF3D
DIABLO
SREBF1
NLK
RAB37
ZNF503
RHBDD1
RTN4
SERPINE1
CBX5
CEP41
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
ARHGEF10L
G3BP1
EFEMP2
CDS2
USP42
ARID4A
DUSP9
KIAA0319
ILF2
PNKD
TXNDC11
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
NRSN2
TOP2A
TCTEX1D4
BTBD19
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
B4GAT1
CYB5R4
LCK
CHD8
HNRNPA2B1
MAF1
SCAP
CMSS1
GFOD1
EPM2A
EXOSC4
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PARK7
SEPTIN9
PRDM12
PCGF1
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
HOXB4
LTBR
DUSP12
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
GBA
HNRNPC
TANK
TRAF4
ATP23
MPV17L2
SLC25A19
ABHD2
ARNTL
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
ZNF148
DDX1
HECTD4
ZCCHC3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
HOXC5
LRRC59
CCDC107
DNAJB1
POLR2J3
TMEM94
KIAA0319L
HNRNPUL1
TCF4
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
CSRNP1
C8orf37
GLRX5
NFE2
ZBTB18
ARHGAP24
STAT3
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
FAM227B
DTWD1
STARD4
NRSN1
ACVR1
CIC
ETV4
MYADM
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
ARHGEF1
SKIV2L
NELFE
PSMD9
HPD
HINT2
TOMM40
SIRT4
MEF2C
USP3
ACTL6A
TMEM9
IL6ST
TLN1
CREB3
L1CAM
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
CALR
PARP2
GLRA1
HMGN4
CLTC
LZTFL1
TMEM86A
SLCO4C1
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
AP3M2
CNPY3
PGP
C16orf54
CLDN2
ELF1
LDLR
RPS6KA1
MAP11
MFN2
KDM1A
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
CYP1A1
RNASEH1
ZBTB45
E2F3
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
WDR25
WARS1
TMEM222
DIAPH3
MAN2C1
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
MAD2L1BP
PIK3AP1
DZIP3
CIP2A
MTHFR
WBP4
NME1-NME2
NME1
DGKZ
WNT10B
PTP4A2
CD38
TOM1L2
DRC3
SLC35E2A
EIF4A3
CLIC4
PLIN2
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FAM110A
TMEM217
TBC1D22B
C12orf65
LFNG
IDH1
FGR
MED23
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
BCAR3
SLC25A25
H4C3
TMX2
MED19
TRIAP1
FLAD1
ZDHHC4
MIA2
FGA
OTX1
MRPS23
SERPINB6
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
CLK2
VANGL2
TOB2
ZC3H6
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
BNIP2