ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◣ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NVL
NME6
PSMG2
CEP76
SUDS3
DYNC1LI2
VTI1B
IPO13
NCLN
VDAC2
HSPA9
RWDD1
NUP85
EFTUD2
CCDC103
EXOSC5
BCKDHA
GATA4
REXO1
RPL21
DCTN1
HOXA2
SLC35B1
TBCK
AIMP1
POLR2E
NUP205
BBS9
SRD5A1
SEC61B
ALG2
STAM2
MRPS7
GGA3
ARHGEF10L
STAM
C19orf48
TSN
ATP5MG
GOSR2
BLCAP
PES1
UPF2
ACTR10
IRGQ
ZNF576
HADHB
HADHA
VARS1
SUPV3L1
HOXB3
MRPS5
PSMD12
SKP1
TSNAX
GOLGA5
RBBP5
PAK1IP1
C6orf52
PNO1
LYRM4
FARS2
FARSB
PCBP1
TTC8
C17orf80
FAM104A
RPS23
ATP6AP1L
NDUFA4
ISCU
SART3
PI4KB
RUNX1T1
SMC2
TMED1
RABGGTB
USP1
COX7A2L
ZRANB2
PROSER1
NHLRC3
CELF4
SF3B3
COG4
ADK
AP3M1
ANAPC7
TBX2
RBKS
BABAM2
ICE1
EIF4ENIF1
TBX3
UFM1
RPS12
SELENOF
HS2ST1
TM9SF1
NR2F1
CAPRIN1
XPNPEP3
ST13
RPS27A
CLHC1
DMD
DPH6
PAF1
PDAP1
BUD31
IQCG
RPL35A
LIN28A
OSGEP
APEX1
ELOVL6
BAG6
CLGN
VPS13A
DDX39B
CXXC4
NDUFA10
COMMD1
CCT4
OAZ3
MRPL9
HEXIM2
PDE12
NEO1
MGST1
DIAPH3
STK36
RNF25
PIN4
ZFHX4
SUCLG1
MRTFB
PRUNE2
ZNF608
ZNF503
ASPG
ACKR3
PTGES2
POU2F1
NIBAN1
KIAA1217
FLVCR1
GBP3
PKDCC
ACVR1
CCDC183
CNPY2
PLAGL1
MRTO4
EMC1
ARHGAP11A-SCG5
ARHGAP11A
HOXA4
P2RX6
C9orf153
SEH1L
ZFHX3
FGF7
HOXB9
ZNF587B
SEC11C
EIF3D
PPFIA2
TLE4
RSRC1
EYA1
CNR1
TAF9
RAD17
AK6
ZGPAT
ARFRP1
PRR13
RPL7
RDH10
CDC42EP3
ZBTB18
GTF3C4
DDX31
RPS29
LRR1
TNP1
HES1
NT5C3A
TMEM9
SCHIP1
RARA
POLDIP3
POLR3A
CPA1
LIX1
DSCAML1
ZP3
HOXC5
SORBS2
CCNDBP1
ABCC9
CYP26A1
COLEC12
SKIL
ZNF383
PPP1R3D
FAM217B
TMSB4Y
RAB30
HOXA3
ATP1A1
MYLK3
CDC73
CDH3
CACYBP
ID2
MEIS2
KDM3A
RPN1
CS
SALL4
GABRB2
PEDS1-UBE2V1
PEDS1
TTI2
GFRA3
VTN
NNMT
PDGFRA
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CCDC59
HOXA5
TXNRD1
GORAB
USP34
HNRNPD
REC8
MGST2
IRS2
TLE2
HOXB8
STRA6
EIF2S3
MDC1
COL5A2
VANGL2
PDHX
APIP
CEP70
TBX18
SLITRK6
ALKBH5
FGF8
GADD45GIP1
CALM2
KCNIP4
ZNF746
CAPN7
EDNRB
IGF2BP3
UNKL
C12orf29
ALG10B
PDE7A
CCN2
IL1RAPL1
SLC25A6
NDUFB3
FAM126B
HSPA1B
ID3
ST7
DUSP9
HEY2
FOXP1
DNAJB4
ECHDC1
HAND2
CREB5
OTUD4
MRPL39
MRPL38
SEMA3E
MPPED2
BRD3
NEURL2
CTSA
SPRR2F
PCDH15
ESRRG
KANK1
NELL2
SMAD7
TNRC18
TCF4
ZNF644
ETV1
DZIP3
CIP2A
MCF2
AHNAK
SH3BP4
RCOR1
GTF2H5
IKZF4
PKIA
NR2F2
CSNK1A1
IGFL2
FHL1
PLEK2
RAPGEF4
DCN
PCBD2
TNFRSF19
UBE2I
RARB
RPS10-NUDT3
RPS10
CDH18
GRWD1
DUSP6
BNIP2
ZYX
SH2B1
GFRA1
H2BC5
IL19
TRIM24
CSDC2
USP17L15
CFAP69
ATG2A
STARD13
SIRT4
KMT2A
ANK3
MAML3
RAP2C
CDA
SRRM3
CLCN3
RBM25
DLAT
VIM
SPIN1
PDCL3
PCDH18
JADE1
ANKS1B
SLC30A4
CRY1
TAS2R9
DNAH12
TBC1D5
UGT2B11
DLG2
RARG
YTHDF2
MSX2
IFI16
PYDC5
CBFA2T2
OTUD7B
ZNF341
SYNJ2BP-COX16
SYNJ2BP
H3C12
MID1
SVEP1
HOXB5
SLC18A1
TBC1D9
SASH1
HOXB13
TTLL6
ELF1
WBP4
RAPGEF2
NSD2
TFAP4
PCNX4
TMED7-TICAM2
TMED7
ANXA11
AXDND1
VPS33B
ARAP2
NDUFS7
ITGAV
KAT6B
SERTAD2
XPR1
GLT8D1
SPCS1
ALG5
PAM
EIF4A2
NEK7
PAQR8
EIF3A
SKIV2L
NELFE
DRAP1
C11orf68
FGD3
HIBADH
TCHP
MEF2C
RCOR3
SKAP2
SMIM20
RGS5
RNF207
GAS1
XPO1
CLDN2
LIN28B
ACBD6
CPN2
ST3GAL6
SEMA3A
CCDC174
UBA3
JMJD1C
UTRN
CHD8
ATP5MC1
EVA1B
AJUBA
CLASP2
PDCD4
MTF2
PRSS47
PNN
ACYP1
ZC2HC1C
SRCAP
LOC730183
CMTR1
AKIRIN1
ARID5B
CTF1
RNF125
SGK3
RASSF4
ATF6
CBX3
HNRNPA2B1
ADM
ZBTB20
ADAMTSL4
YAP1
HOXB2
MYADM
ZNF391
MAD2L2
DRAXIN
KAT6A
E2F6
CEP85L
ABHD12
AMOTL2
SLC28A3
THUMPD3
MEIS3
ALPK2
PHACTR2
GLRX2
HUS1
DUSP4
REL
IFT74
NCBP3
ISG15
NELFA
ARHGEF1
LDB1
MFAP4
ACTB
POLR2J3
MAP4
ECSIT
COL23A1
QPRT
MYO16
TNNT2
KANSL3
RERE
ZSCAN30
ITGBL1
ALX1
CNOT2
SULF1
MTRF1L
HINT2
ATAD2
SYNJ2
PDE4D
PPIP5K2
GIN1
KCNT2
NCOA7
BAG2
NBN
TBPL1
KIAA2026
SLC26A8
MARCKS
SEC14L5
SHB
TRIP12
FBXO36
CPVL
CHN2
EPHA3
JAK1
ANAPC15
SLC18B1
ARHGDIB
ZNRF1
BEND4
FABP5
SPPL2A
ELAPOR2
CEP41
DEDD
SH3BGR
LCA5L
ZNF783
MDK
NEUROG2
NEUROG3
MTRNR2L8
MTRNR2L2
SPATC1L
VEZT
FGD6
BICRA
FLOT1
SP2
PMAIP1
C16orf91
NEUROG1
ATOH1
DHRS3
BNIP3
GPR108
IGFBP2
WDR74
DNM2
TPRA1
ANKLE2
P4HB
TEPSIN
NDUFAF8
MINDY2
NPAS4
RAB5B
STX18
DONSON
DOLPP1
CAMTA1
PDHB
SP5
ANK2
UPF3A
RBPJ
KATNB1
PANK2
FRA10AC1
ZNF687
PGK1
SMARCD2
RFX1
XKR7
MTMR4
NRL
SRSF11
DPP9
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
KIF21B
LRRC40
ARRDC4
ST18
NFKBIA
ARSG
IQSEC3
RMND5A
DCAF11
SP1
PCNA
OSBP
PPCDC
MRPL34
INSM1
STIP1
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
KAZALD1
MACROH2A1
GPCPD1
MALRD1
CRLS1
EVI5L
GRSF1
EIF2AK3
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
POLG
PKN2
KNL1
DAGLB
SHF
MLEC
MYRIP
ANKRD28
FBXO31
CCDC43
SACM1L
SMG6
PRMT5
RBBP7
DIABLO
SREBF1
NLK
RAB37
COX5A
RHBDD1
RTN4
SERPINE1
CBX5
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
NCOA2
G3BP1
EFEMP2
CDS2
EIF4H
USP42
ARID4A
KIAA0319
ILF2
PNKD
TXNDC11
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
MBD2
ROGDI
NRSN2
NR2C1
BFSP1
TOP2A
TCTEX1D4
BTBD19
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
PRDM10
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
MAF1
SCAP
CMSS1
GFOD1
EPM2A
EXOSC4
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
SEPTIN9
PRDM12
PCGF1
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
HSP90B1
HOXB4
LTBR
DUSP12
UBE2C
GPATCH8
IRS1
GBA
BRWD1
HNRNPC
TANK
MEPCE
TRAF4
ATP23
MPV17L2
SLC25A19
ABHD2
ARNTL
CLK1
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
LPIN1
ZNF148
DDX1
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
PRR14
YARS1
S100PBP
ZCWPW1
LRRC59
CCDC107
DNAJB1
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
NKIRAS1
C8orf37
GLRX5
NFE2
ARHGAP24
STAT3
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
GATD3B
GATD3A
CIC
ETV4
NBPF1
MSMO1
ATXN1L
FBXO41
CCNL1
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
DYNLT1
CD24
PSMD9
HPD
TOMM40
USP3
ACTL6A
IL6ST
TLN1
CREB3
L1CAM
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
CDCA7L
RPS24
CALR
PARP2
GLRA1
HMGN4
CLTC
LZTFL1
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
PLEKHA6
AP3M2
CNPY3
PGP
C16orf54
LDLR
RPS6KA1
MAP11
MFN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
ZBTB45
E2F3
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TBC1D8
FAM162A
CCDC58
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
TLE3
PIWIL2
VIRMA
TMBIM6