ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◣ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
MAPKAPK5
ZNF335
PSMD1
CACTIN
DYNC1LI2
NME6
POLR3F
DZANK1
RWDD1
SUDS3
PSMG2
CEP76
VTI1B
IPO13
NUP85
EFTUD2
CCDC103
VDAC2
NVL
HOXA2
GATA4
STAM2
SKP1
LYRM4
FARS2
HSPA9
NCLN
GOSR2
TBCK
AIMP1
UPF2
DCTN1
SRD5A1
POLR2E
NUP205
ATP5MG
TSN
REXO1
EXOSC5
BCKDHA
COX7A2L
MRPS7
GGA3
SEC61B
ALG2
BLCAP
C19orf48
STAM
TSNAX
MRPS5
ACTR10
ICE1
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
SUPV3L1
HADHB
HADHA
BBS9
PES1
C17orf80
FAM104A
PAK1IP1
C6orf52
HOXB3
PI4KB
RABGGTB
EIF4ENIF1
USP1
ZRANB2
IRGQ
ZNF576
XPNPEP3
ST13
RBKS
BABAM2
ADK
AP3M1
ANAPC7
UBE2I
SMC2
CELF4
TM9SF1
UFM1
RPS23
ATP6AP1L
DPH6
RPS12
RUNX1T1
IQCG
RPL35A
NDUFA4
CAPRIN1
ISCU
SART3
SF3B3
COG4
PCBP1
PAF1
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
DDX39B
RBBP5
SUCLG1
CLGN
TMED1
RPS27A
CLHC1
NEO1
OSGEP
APEX1
NDUFA10
BAG6
TBX3
NR2F1
COMMD1
CCT4
OAZ3
MRPL9
DMD
HOXC6
HOXC4
VPS13A
PTGES2
ELOVL6
HEXIM2
HOXA4
PDE12
BICRA
MRTO4
EMC1
RSRC1
ANKLE2
HES1
PDAP1
BUD31
LIN28A
STK36
RNF25
EIF2S3
PRUNE2
DIAPH3
CXXC4
MGST1
CPA1
PIN4
ZNF608
RPL7
RDH10
ZFHX4
SKIL
TAF9
RAD17
AK6
RARA
TTI2
P2RX6
CNR1
MRTFB
ASPG
ACKR3
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
ID2
FLVCR1
ZNF503
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
ZGPAT
ARFRP1
KIAA1217
LIX1
RPN1
HOXA3
FGF7
USP34
ZNF587B
MDC1
TNP1
RBPJ
CNPY2
POLR3A
PKDCC
HOXB8
PPP1R3D
FAM217B
CYP26A1
ACVR1
NDUFS7
HOXC5
EIF3D
PEDS1-UBE2V1
PEDS1
CCDC183
KDM3A
TXNRD1
PCDH18
GABRB2
RPS29
LRR1
PLAGL1
DSCAML1
ZBTB18
GADD45GIP1
CCNDBP1
HOXA5
PCDH15
SPRR2F
CCDC174
TLE4
SALL4
GBP3
SH2B1
ZFHX3
POLDIP3
ABCC9
SEC11C
H2BC5
CCDC59
TMSB4Y
POU2F1
CBFA2T2
ECHDC1
CAPN7
RAPGEF4
EYA1
CDC42EP3
ZNF383
GORAB
VANGL2
FGF8
REC8
TBX18
SVEP1
IGF2BP3
C9orf153
GTF3C4
DDX31
CDC73
HUS1
CCN2
NELL2
SCHIP1
SORBS2
GFRA3
NNMT
ZYX
C12orf29
RCOR3
ZNF341
UBA3
TNFRSF19
HEY2
PDGFRA
FOXP1
CDK6
MYLK3
ZNF430
ID3
NT5C3A
ZP3
KCNIP4
SEMA3E
ZNF746
CDH18
RNF207
HNRNPD
OTUD4
PBX2
HOXB5
ALKBH5
VTN
IRS2
SHB
RCOR1
SLC25A6
VOPP1
SYNJ2BP-COX16
SYNJ2BP
MAD2L2
DRAXIN
CACYBP
ANXA11
FHL2
BNIP3
SRSF11
LRRC40
TCF4
MGST2
DUSP6
CEP70
CFAP69
TRIP12
FBXO36
ESRRG
PCNX4
ZNF853
CDH3
NDUFB3
FAM126B
SERTAD2
ACYP1
ZC2HC1C
MID1
ZSCAN30
DLG2
CS
ITGBL1
OLFML1
SLITRK6
ALPK2
PCBD2
DNAH12
MPPED2
WWP2
TNNT2
BNIP2
IL1RAPL1
NR2F6
CBX3
HNRNPA2B1
ATXN2L
CLASP2
DHRS3
CEP41
PDCL3
FNDC5
SUPT7L
SLC4A1AP
KAT6B
QPRT
CELF2
SLC28A3
GRWD1
CTF1
ELK4
RANBP17
GFRA1
RGS5
PAQR8
SKIDA1
DGKZ
SEC24A
DNAJB4
RASSF4
ART5
NEUROG2
NEUROG3
MTRNR2L2
MTRNR2L8
RARB
SPATC1L
VEZT
FGD6
FLOT1
SP2
PMAIP1
NEUROG1
ATOH1
GPR108
IGFBP2
NEURL2
CTSA
WDR74
DNM2
TPRA1
P4HB
TEPSIN
NDUFAF8
PDHX
APIP
MINDY2
NPAS4
C16orf91
GLT8D1
RAB5B
KANSL3
STX18
DONSON
DOLPP1
CAMTA1
PDHB
SP5
ATF6
ANK2
OTUD7B
UPF3A
KATNB1
MRPL38
FRA10AC1
ZNF687
PGK1
RFX1
XKR7
MTMR4
PANK2
NRL
DPP9
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
KIF21B
ARRDC4
ST18
PDE4D
NFKBIA
SMARCD2
IQSEC3
RMND5A
DCAF11
SP1
RARG
PCNA
OSBP
PPCDC
MRPL34
INSM1
STIP1
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
KAZALD1
MACROH2A1
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
PPP6R3
METTL11B
GADD45G
ARSG
TMEM70
KCNAB2
KNL1
DAGLB
SHF
MYRIP
ANKRD28
FBXO31
SACM1L
SMG6
PRMT5
POLG
RBBP7
SLC30A4
DIABLO
SREBF1
NLK
RAB37
COX5A
RHBDD1
RTN4
SERPINE1
SERPINB1
NKD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA2
MTF2
G3BP1
AXDND1
EFEMP2
CDS2
HNMT
USP42
ARID4A
DUSP9
ILF2
PNKD
TDRKH
HTR5A
AIFM2
TRIB1
SEC14L1
HIBADH
WTAP
LUC7L2
PRKACA
ARHGAP4
MBD2
KMT2A
ROGDI
NRSN2
HMGB1
NR2C1
BFSP1
TOP2A
ID1
TCTEX1D4
BTBD19
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
RPS10-NUDT3
RPS10
TBL1X
HSPA1B
INAFM2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
ZNF76
CYB5R4
LCK
MAF1
SCAP
ADM
CMSS1
GFOD1
EPM2A
PRDM10
EXOSC4
STX16
CASC3
TSPAN4
TUBB4B
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
PRDM12
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
USPL1
HSP90B1
HOXB4
LTBR
TMEM60
PHTF2
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
MFSD11
HNRNPC
TANK
SEPTIN9
TRAF4
ATP23
MPV17L2
SLC25A19
CBX5
TXNDC11
ABHD2
ARNTL
CLK1
CLCN3
MVD
SPCS1
CYCS
LPIN1
ZNF148
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
YARS1
S100PBP
LRRC59
CCDC107
DNAJB1
POLR2J3
KIAA0319L
TMPPE
GLB1
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
CALM2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
NKIRAS1
C8orf37
GLRX5
NFE2
ARHGAP24
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
H4C12
GATD3B
GATD3A
CIC
TMEM94
ETV4
MYADM
NBPF1
MSMO1
ATXN1L
NCOA7
FBXO41
CCNL1
PRR14
RAI14
CCPG1
C15orf65
LAPTM5
NELFA
RAB11A
MBD6
ARID5A
DCP1A
NUF2
PXMP4
CEBPE
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
SKIV2L
NELFE
PKN2
DYNLT1
PSMD9
HPD
HINT2
TOMM40
LNPEP
MEF2C
USP3
ACTL6A
SPIN1
L1CAM
RGS12
SLC7A5
PSMD3
MANF
TRIP4
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
CDCA7L
SRSF2
GLRA1
HMGN4
MFSD6
LZTFL1
TMEM86A
YTHDF2
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
BRWD1
EEF1AKNMT
TOP2B
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
ARMC1
HNRNPL
AP3M2
CNPY3
PGP
C16orf54
CLDN2
LDLR
RPS6KA1
MAP11
MFN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
NBN
TIGD2
OPA1
PSMF1
CABIN1
C1RL
BAIAP2
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
DIAPH1
YIF1A
BRD2
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
IQCH
AAGAB
AKIRIN1
KIAA0319
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
PKM
KAT6A
ZBTB45
E2F3
ADRM1
NADK
NBEAL2
MAPKAPK3
CISH
PARP2
TBC1D8
TMCO6
ADGRG3
DENND4B
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
TMEM259
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
LEKR1
ELF1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
PIK3AP1
DZIP3
CIP2A
MTHFR
WNT10B
PTP4A2
CD38
TOM1L2
DRC3
STAT3
SLC35E2A
PLIN2
SRPRA
UGT2A3
NFE2L1
FGFRL1
MAP3K3
TMEM217
TBC1D22B
C12orf65
LFNG
IDH1
FGR
MED23
RPS8
CMTR1
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
CPVL
BCAR3
H4C3
TMX2
MED19
PEX2
TLN1
SIRT4
CREB3
KLF17
TRIAP1
FLAD1
MIA2
FGA
OTX1
SLC24A1
SERPINB6
INTS14
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
H4C15
H4C14
DDX3X
CLK2
TOB2
ZC3H6
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
CLIC4
KATNA1
UBL7
TOP1MT
PLEKHA7
EIF4A3
PHF8
RCL1
PPP1R13B
THUMPD3
PMPCB
NME1-NME2
NME1
NFE2L2
C6orf136
IL27
SLC33A1
CALR
BDH1
TBCCD1
ASB1
SLC25A45
HAL
EIF4H
SHFL
DRAP1
C11orf68
TRAF2
RECQL
GOLT1B
STK11
SPATA1
MCU
DENND2D
TEDC1
BZW2
TIMM44
UGP2
HERC5
ZDHHC4
KBTBD2
TRABD
SAXO2
EFL1
CTNNB1
RXRA
IL6ST
PPIB
AHCY
PA2G4
PACSIN2
IST1
PHPT1
CHN2
MVK
MRPS23
UPP1
ATF3
FDFT1
FAM110A
ACACA
ZNF414
COQ10A
LRRC45
CENPX
GDPGP1
CIB1
ZBTB20
ABCA12
C6orf89
SRRM3
SDE2
PLCB2
LRRC37A3
MC1R
DROSHA
C5orf22
RASGRP2
CDC25C
DUSP4
HHAT
BOD1L1
DDIT4
WBP4
FAM120B
NMNAT1
LZIC
ZBTB17