ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039039 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◣ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
ZNF335
RABL2A
DYNC1LI2
PSMD1
PSMG2
CEP76
CACTIN
NME6
IPO13
MAPKAPK5
POLR3F
DZANK1
SUDS3
EFTUD2
CCDC103
NVL
NEUROG3
DPH6
VTI1B
NUP85
VDAC2
DCTN1
RPL21
C19orf48
HSPA9
TBCK
AIMP1
NUP205
NCLN
STAM
GOSR2
MRPS7
GGA3
TSNAX
RWDD1
SKP1
POLR2E
HADHB
HADHA
STAM2
TTC8
ATP5MG
PNO1
SLC35B1
SEC61B
ALG2
IRGQ
ZNF576
MRPS5
RPS23
ATP6AP1L
SRD5A1
PAK1IP1
C6orf52
SMC2
BLCAP
UPF2
TSN
FARSB
RBKS
BABAM2
VARS1
PDAP1
BUD31
CAPRIN1
SUPV3L1
EIF4ENIF1
REXO1
PES1
ACTR10
COX7A2L
EXOSC5
BCKDHA
ZRANB2
LYRM4
FARS2
TMED1
SELENOF
HS2ST1
GOLGA5
FGFRL1
IQCG
RPL35A
C17orf80
FAM104A
TM9SF1
USP1
PI4KB
PSMD12
RBBP5
ICE1
ADK
AP3M1
NDUFA4
PTGES2
RPS27A
CLHC1
PAF1
COMMD1
CCT4
VEZT
FGD6
NEUROG1
ISCU
SART3
RPS12
UFM1
RABGGTB
XPNPEP3
ST13
ANAPC7
OSGEP
APEX1
PCBP1
ATOH1
BAG6
PROSER1
NHLRC3
DDX39B
SF3B3
COG4
ST18
MYRIP
RBL2
SHB
HESX1
PIN4
STK36
RNF25
EIF2S3
RPS29
LRR1
TAF9
RAD17
AK6
LPIN1
DENND1A
SEC11C
PMAIP1
ARHGAP11A-SCG5
ARHGAP11A
GADD45GIP1
CALM2
KLF17
SUCLG1
NDUFA10
BNIP3
TPRA1
CCDC92
HES1
CERKL
GADD45G
SKIL
UBE2I
RPL7
RDH10
TLE2
RBPJ
PCBD2
ZNF383
GATA4
MRTO4
EMC1
PDHX
APIP
TMEM70
ACOT2
AMOT
GORAB
NEUROG2
HSPA1B
TIGD1
EIF4E2
GTF3C4
DDX31
DTNB
NKIRAS1
NR1D2
UPF3A
ALKBH5
TMPPE
GLB1
CNPY2
GSR
CDC73
RPN1
ZGPAT
ARFRP1
OAZ3
MRPL9
AXDND1
PRUNE2
APLN
MBD2
ZNF503
C15orf61
CPVL
CHN2
GPR108
PKIB
LDLRAD4
GLT8D1
SPCS1
PLA1A
BICRA
ANKLE2
DSCAML1
SRSF11
LRRC40
SCAMP4
ADAT3
RAN
DUSP4
MACROH2A1
CABIN1
DLX4
ZNF397
CBX3
INKA2
KIF21B
INSM1
RSPO4
ATP6V0A4
BAMBI
MRPL38
CIAO2A
TBC1D8
FOXP2
MEPCE
ZCWPW1
DDX3X
PDE12
CLDN15
SLC40A1
HNRNPD
JAKMIP1
OLIG3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
METTL11B
RYBP
ARHGAP28
NCOA2
GRHL2
RBBP8NL
PLEKHA5
ANXA9
DLL4
LIN28A
STRADA
USP17L15
MAST2
TCHP
PAH
ASCL1
IGF2
TAS2R7
RARA
BTBD3
ZNF746
SGK1
CDS1
MID1
RUNX1T1
RNF32
CHPT1
FANK1
C16orf91
PDCD2
VENTX
H3-3A
ACOT1
DCLRE1C
TBL1XR1
CEMP1
YAP1
PXMP2
POLE
KAZALD1
LCOR
RIMS2
RBBP7
TRAP1
ZNF853
ZNF891
ZNF10
PCLO
KAT6B
ARL14EP
PRDM10
KDM1A
TENT4B
RPS10-NUDT3
RPS10
EIF4H
HOXB9
CHD8
MTCH2
OTX1
CCDC169-SOHLH2
CCDC169
RIMS1
ZNF81
CENPBD1
SPIN1
APBB1IP
OTP
KCNJ4
PTPRG
FAM53B
SP7
CCDC88C
CCNDBP1
HINT1
BAZ1A
LIX1
STRA6
WNT3
PODXL
FAM120B
TNFRSF19
PAX7
COMT
TRIM45
GOLM1
MACROD2
SUCLG2
GNG4
CNOT2
ERI1
ZBTB25
ZBTB1
ALDH3A2
PLAGL1
RPS24
DUSP12
CDX1
UPK2
NELFA
PRSS47
SHBG
FXR2
YTHDF2
SEMA3C
EVC2
PKNOX1
GEMIN7
KIF26A
BTG1
DHRS3
SMARCA4
SH2B1
SERTAD2
NFAM1
SYDE2
ZNF292
ANKRD28
PARP16
CASC3
MTRNR2L8
MTRNR2L2
RARB
SPATC1L
FLOT1
SP2
HOXA4
NDUFS7
BBS9
NEURL2
CTSA
IGFBP2
TTI2
WDR74
HOXA2
DNM2
ID2
P4HB
TEPSIN
NDUFAF8
MINDY2
NPAS4
TBX2
CLGN
RAB5B
KANSL3
STX18
ZFHX3
DONSON
DOLPP1
CAMTA1
CBFA2T2
PDHB
SP5
ATF6
TLE4
ANK2
OTUD7B
KATNB1
PANK2
CCDC174
FRA10AC1
ZNF687
PGK1
HUS1
SMARCD2
RFX1
XKR7
DUSP6
MTMR4
QPRT
FOXP1
NRL
DPP9
TBX3
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
ARRDC4
PDE4D
NFKBIA
ARSG
HOXA3
IQSEC3
POLDIP3
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
MRPL34
STIP1
RNF207
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
CS
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
MTF2
PPP6R3
KCNAB2
POLG
PKN2
KNL1
HEXIM2
DAGLB
SHF
MLEC
FBXO31
CCDC43
SACM1L
SMG6
KDM3A
PRMT5
EIF3D
SLC30A4
DIABLO
SREBF1
NLK
RAB37
COX5A
RHBDD1
RTN4
SERPINE1
CBX5
CEP41
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
ARHGEF10L
G3BP1
EFEMP2
CDS2
USP42
ARID4A
DUSP9
KIAA0319
ILF2
PNKD
TXNDC11
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
KMT2A
ROGDI
NRSN2
NR2C1
BFSP1
TOP2A
TCTEX1D4
BTBD19
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
ACYP1
HNRNPA2B1
MAF1
SCAP
ADM
CMSS1
GFOD1
EPM2A
EXOSC4
STX16
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
SEPTIN9
PRDM12
PCGF1
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
GBA
BRWD1
HNRNPC
TANK
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
CLK1
CLCN3
CCDC59
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
ZNF148
DDX1
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
HOXC5
LRRC59
CCDC107
DNAJB1
POLR2J3
TMEM94
KIAA0319L
HNRNPUL1
TCF4
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
CMTR1
C8orf37
GLRX5
NFE2
ZBTB18
ARHGAP24
STAT3
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
ACVR1
GATD3B
GATD3A
CIC
ETV4
MYADM
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
ARHGEF1
SKIV2L
NELFE
DYNLT1
CD24
PSMD9
HPD
HINT2
TOMM40
SIRT4
MEF2C
USP3
ACTL6A
TMEM9
IL6ST
TLN1
CREB3
L1CAM
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
CALR
REC8
PARP2
GLRA1
HMGN4
CLTC
LZTFL1
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
PLEKHA6
AP3M2
CNPY3
PGP
C16orf54
CLDN2
ELF1
LDLR
RPS6KA1
MAP11
MFN2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
KAT6A
ZBTB45
E2F3
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
FAM162A
CCDC58
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
MAN2C1
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
MAD2L1BP
PIK3AP1
DZIP3
CIP2A
MTHFR
WBP4
NME1-NME2
NME1
DGKZ
WNT10B
PTP4A2
CD38
TOM1L2
DRC3
SLC35E2A
EIF4A3
CLIC4
PLIN2
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FAM110A
TMEM217
TBC1D22B
C12orf65
LFNG
IDH1
FGR
MED23
RPS8
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
BCAR3
SLC25A25
H4C3
TMX2
MED19
PEX2
TRIAP1
FLAD1
ZDHHC4
MIA2
FGA
MRPS23
SERPINB6
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
CLK2
VANGL2
TOB2
ZC3H6
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
BNIP2
DUS1L
C6orf89
KATNA1
UBL7
TOP1MT
PLEKHA7
PHF8
RCL1
PPP1R13B
THUMPD3
PMPCB
SDE2
SLC25A6
NFE2L2
C6orf136
IL27
SLC33A1
ZNF341
BDH1
MLLT11
CDC42SE1
TBCCD1
MGST2
ASB1
SLC25A45
HAL
SHFL
TRAF2
RECQL
GOLT1B
STK11
SPATA1
MCU
DENND2D
TEDC1
BZW2
TIMM44
LEMD2
UGP2
HERC5
NREP
KBTBD2
TRABD
SAXO2
FNTA
EFL1
CTNNB1
RXRA
PPIB
AHCY
PA2G4
PACSIN2
IST1
CIPC
PHPT1
RBM25
MVK
R3HCC1
UPP1