ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◣ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
TBCK
AIMP1
RWDD1
HADHB
HADHA
RPL21
NCLN
VTI1B
EFTUD2
CCDC103
NUP85
SRD5A1
ID2
SLC35B1
NUP205
POLR2E
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
GGA3
HOXA2
REXO1
STAM2
DCTN1
VDAC2
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
BLCAP
RPS23
ATP6AP1L
DPH6
VARS1
PES1
NDUFA4
SEC61B
ALG2
IRGQ
ZNF576
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
TMED1
MRPS5
PNO1
TM9SF1
COX7A2L
RBKS
BABAM2
EIF4ENIF1
ANAPC7
USP1
IQCG
RPL35A
RBBP5
CAPRIN1
PI4KB
ISCU
SART3
ICE1
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
C17orf80
FAM104A
PROSER1
NHLRC3
XPNPEP3
ST13
ACTR10
PDE12
RBPJ
CDC42EP3
ZFHX3
OSGEP
APEX1
LTBR
SCNN1A
NEO1
RPS12
PTGES2
BAG6
UFM1
C12orf29
PTK2B
CLGN
ZNF608
PCBP1
CCNDBP1
NR2F1
NSUN6
ARL5B
PAF1
VANGL2
SF3B3
COG4
DIAPH3
RBMS3
GABRB2
LAMA3
EIF2S3
ST18
TLE2
KCNIP4
HEXIM2
ZGPAT
ARFRP1
MRTO4
EMC1
HBB
GADD45GIP1
PIN4
MBD2
DDX39B
SUCLG1
GATA4
SLC30A4
NDUFA10
MSX2
TTI2
MYRIP
CXXC4
CABIN1
ARHGAP11A-SCG5
ARHGAP11A
TMEM106B
SEMA3E
RSRC1
HEY2
CNR1
TBX2
KAT6B
BNIP3
MET
RARA
ARHGEF10L
RPS29
LRR1
CDS1
OAZ3
MRPL9
MKRN2
HES1
PRUNE2
PDHX
APIP
CACYBP
STK36
RNF25
SMAGP
ZNF746
SEC11C
SPAG17
KDM3A
ST7
ZFHX4
RPN1
RPL7
RDH10
FOXP1
EIF3D
LIN28A
CDC73
HOXA4
TBC1D9
CNPY2
PKDCC
CCDC59
GFRA1
ZNF383
TXNRD1
TMEM70
TAF9
RAD17
AK6
NDUFS7
CCDC174
FMN1
POLR3A
ACOT2
OSGIN2
TNK2
GPR108
FREM2
SLC25A53
SPIN1
PCBD2
REC8
GTF3C4
DDX31
NDUFB3
FAM126B
TCF7
HOXA1
FRRS1
RABGAP1L
RPS10-NUDT3
RPS10
SLC25A6
EPM2A
IL20
PCDH15
GTDC1
GORAB
TBX3
CFAP69
TCF4
MGP
SKIL
OTUD7B
ESRRG
METRN
TNFRSF19
ITGAV
MYZAP
GCOM1
RUNX1T1
ALKBH5
MGST1
SLITRK6
ATOH1
FGD3
CBWD5
CBWD3
ZNF507
RGS8
STX19
EMX2
RARG
ZNF395
GEMIN2
CS
PBX2
EOMES
TMPRSS11F
TMEM9
ATXN2
SYNJ2BP-COX16
SYNJ2BP
YTHDF2
CSNK1A1
CISD1
IPMK
CLCN3
POU2F1
GLT8D1
SPCS1
SERTAD2
ACKR3
NLGN1
USP34
ARAP2
MRPL34
ID1
PDCL3
ABHD8
PRR13
NXPH4
C16orf91
CIAO2A
VPS33B
CYP26A1
ERP27
UBE2I
NEFH
PRKD1
CEP70
INKA2
RASSF6
USP17L15
ELOVL6
LIX1
HUS1
PEX14
IMMP1L
ELP4
ADM
KAT6A
TMSB4Y
DUSP9
CBWD6
ATXN1L
DENR
SLC35F2
DONSON
DHRS3
SRSF11
LRRC40
PDE4D
TIGD1
EIF4E2
PXYLP1
CBX3
HNRNPA2B1
SEMA6D
SEPTIN2
HDLBP
B3GNT5
NCBP3
JAKMIP1
MYLK3
PDHB
MEIS2
C2CD5
TRIP4
ID3
CRABP2
TLE4
HSPA4L
MCU
H2BC5
HSPA1B
RCOR3
RARB
RAI14
SPATC1L
NEUROG1
RIMS1
LMO1
SH2B1
SEH1L
CTF1
RNF207
MGST2
ACOT1
KANK1
EBAG9
TMPPE
GLB1
DLAT
PKN2
HNRNPD
CALM2
SORBS2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NR2C1
SHB
ZBED9
USP17L22
USP17L20
MSS51
POGLUT3
COLEC12
TPRA1
AKIRIN1
GPRC5A
ANK3
ADAMTSL4
CLDN6
MELTF
PRKAG2
AKAP9
IFI16
GRHL2
FOXP2
PYDC5
PRTG
KMT2A
FAAP24
CEP89
SOX6
PHIP
APLN
OTUD4
STK38
YAP1
NEURL2
CTSA
BCAP29
TCHP
SSBP2
JMJD1C
DERA
PCLO
SMARCD2
LPCAT3
HECTD4
SLC35E2A
TAF1A
UBA3
TMPRSS12
KANSL3
MACROH2A1
CALCRL
COX5A
POLR2J3
CPVL
CHN2
PRIM1
GPR37
PANK2
RCOR1
ZSCAN30
CMTR1
HOXB13
NR2C2
RNF111
ETV1
DYNLT1
REL
HGH1
EID2
ACYP1
ZC2HC1C
DLG2
URGCP
ZKSCAN2
CCDC102A
URGCP-MRPS24
MINDY2
SECISBP2L
ARSB
AP1B1
RILPL1
EML5
QPRT
EIF4H
PEX2
TRIM24
FNDC5
ZDHHC17
IQSEC2
BRWD1
ZBTB17
GIGYF1
POFUT2
KCNS3
MYADM
PARP9
DTX3L
UFSP1
NEUROG2
UBE2V2
CLK1
BNIP2
SALL4
NCOA7
MDC1
SKAP2
IQCB1
EAF2
MYO6
ING1
ZNF385B
GBP1
CDK6
PNN
PJVK
GTF2H5
DNAJA2
PALLD
PRKRA
MTF2
DZIP3
CIP2A
SRSF10
ACBD6
RGS2
PLIN2
GTF2IRD2B
MIGA1
CTNNA1
VEPH1
PCTP
ZNF341
CD55
NNMT
CMSS1
FILIP1L
HINT2
MRPS28
CMTR2
EYA1
SLC7A2
SDR39U1
PLEKHD1
IDH1
RBM7
C11orf71
CEP295
UBB
ADAMTS3
CNOT10
NUP93
MRPS31
SCOC
ZNF629
TBC1D32
DNMBP
NOX3
SOD2
WTAP
DNAJB5
PCNX4
TK2
SKIV2L
NELFE
CLTC
BTG1
DNAH12
NANP
FLVCR1
RPL5
CENPS-CORT
CENPS
TMEM205
CCDC159
PTGES3
ZNF3
CENPBD1
IFT22
TANC2
ACP4
NDNF
GRAMD2B
NELFA
EFEMP2
ARL14EP
BAG2
PHACTR2
BAG3
LSMEM1
NAA40
NIPSNAP2
TLX3
THUMPD3
PPP1R3D
FAM217B
SEMA4B
CBWD2
TNPO3
RHOBTB1
PDE4DIP
ELOA
FAM110A
CTH
FABP5
IGF2BP3
H3-3A
NRDE2
ROBO3
TBC1D8B
JAK1
CFAP20
CRADD
MPPED2
CDKL2
MCF2
HEBP2
WDR81
BATF2
ASAH1
LOC100287896
LIPT2
TRIP12
FBXO36
TRPM7
LRP6
MDM2
B4GALT3
ZSCAN25
PXMP2
POLE
SASH1
HOXA3
RPS3A
SLC30A9
TRAP1
DHCR7
TAS2R7
TM9SF3
PHETA2
SERPINB6
MTCH2
IRS2
CDKN2AIP
EDNRB
TSPAN4
SLX1B
SLX1A
BOLA2B
BOLA2
GRWD1
POLR2L
RAN
MICU2
CYP51A1
NPNT
MARK1
SMIM20
CHD8
SPPL2A
NEK2
ARHGEF12
INTS10
BCAT1
MANEA
USP12
FSTL5
CEP41
CCN2
SUPT3H
MMAA
EEF1E1
CCDC169-SOHLH2
CCDC169
ZNF391
SS18L1
PSMA7
ATP9A
RTRAF
COA1
CFAP46
CAMLG
RTL10
GNB1L
APPL2
STON2
ANAPC15
ZFAND6
TBC1D1
PRSS22
ATF6
OPA1
C15orf61
TTK
KIF5B
MED27
ELMOD1
CNOT2
LNPEP
LSM8
KRTAP3-1
BAMBI
SHOC2
BBIP1
DCLK1
IGFBP2
ZSWIM7
TTC19
TBC1D5
CRPPA
HSPE1-MOB4
HSPE1
HSPD1
DTNB
AGPAT5
LIMA1
ADIPOR2
SIK3
SLC7A11
TMEM144
TXNDC11
ACVR1
ADAM17
FAM162A
CCDC58
NOTCH2NLA
EIF5
CREB5
ETAA1
ZFP64
VPS13B
CTXN2
TYW1B
STX18
PKM
C16orf95
UQCRC2
DAZAP1
FAM168B
CCNG2
TRPC1
MEMO1
RAB11FIP2
NAT10
SLC40A1
SLC44A2
ZDHHC6
VTI1A
DMBT1
SCAP
MTRF1L
SPECC1
MTIF2
BCO2
AMZ2
FER
PNPT1
NFIB
LRRFIP2
SYDE2
HIC2
DYNLRB1
GUF1
TFAP4
CELA1
POLD2
CFL2
GGH
RHOBTB3
ATF2
MECOM
NMD3
FSTL3
ANKRD18A
SPATA9
WDR75
PTH2R
RAPGEF2
ROCK2
NUTM2E
BEND4
SPTSSB
MRPL39
ATG101
IMPA1
TJP2
NUP42
SETD9
ST8SIA6
TFEC
AXDND1
CASC3
NBN
PARL
UROS
BCCIP
CAPS2
NPFFR2
ZNF292
NUDT15
PRKACB
TEFM
PRSS47
ANKRD36C
TFAM
VWA8
GTPBP8
GUCY1A2
ZNF331
NCOA2
STAT2
CCNC
TDRD3
RIOK3
RPRM
AKT3
TCTEX1D1
ELMOD2
MAP3K2
AS3MT
KMT5A
DPY19L4
ATXN2L
PDE7A
LINC02210-CRHR1
DSN1
TYW3
CRYZ
ACP3
CGGBP1
STRADA
BIRC6
WDHD1
SOCS4
PIP4K2B
C3orf38
CSTF2T
XPA
ZNF148
ZBTB45
COQ10B
N4BP2
PLS1
B9D1
MRPL38
PPP1R13B
CTNNB1
LEO1
FAM222B
ATXN7L2
ATP5F1E
SULT1A1
CDK8
DDX59
HNRNPA1L2
MRE11
ANKRD49
MTBP
MRPL13
KCNH1
HIVEP3
SKIDA1
USP30
SGK3
MRPS36
RNF220
SND1
IFT88
AGPS
IGF2BP1
PKIA
ZNF675
PIKFYVE
BAZ1B
ZC3H6
PHF8
CIPC
EFCAB2
TATDN3
NSL1
SPSB2
SLC39A10
C4orf36
LRRC37A3
REV3L
SECISBP2
KMT2D
AFG1L
ETNK1
PATL1
SEC24B
PLEKHA6
MED23
C6orf136
RSPH3
SIRT2
NFKBIB
CDH12
MACROD1
CCNG1
ZMYM4
AVEN
CPLANE1
ARHGEF5
MYEF2
LUZP2
NREP
SLC35A1
GPR137
MYBL1
INPP5A
OLA1
BAD
ZSCAN31
C12orf73
TRIM37
UIMC1
TMEM132A
HIBADH
RYBP
VPS13C
ZFP62
PTPN4
RBM43
DCP1A
PFKM
PIGU
ZC3H15
USP49
APTX
DNAJA1
GOLGA8B
GCA
KLHL9
RDX
ZGRF1
LARP7
IFIH1
KMT5C
SMN2
SMN1
PLK2
SESN1
CREBL2
MBIP
NIBAN1
EIF1
AP3S1
ZNF18
KIAA1109
SLC27A6
GBE1
MFSD8
ABHD18
MAST2
UBE2D4
CHD1L
PRKAB2
SLC35F5
HIF1A
ITPRID2
PLBD1
GCFC2
PDXDC1
FTCDNL1
NEDD1
YPEL1
CKMT1B
GPD2
CEP135
ATP6V0E2
L3HYPDH
JKAMP
ANKRD20A1
DRAP1
C11orf68
PAN2
WDR48
SCN11A
PPP4R3A
ZNF891
ZNF10
RPL6
PTPN11
UBA6
PDSS1
TENT2
TMEM63B
MRPL14
EGF
SOX5
ASXL2
JRKL
CCDC82
DIPK1A
KCNT2
RNF138
HNRNPLL
RUSC2
ZSCAN12
MTMR10
CC2D2B
HMGB1
USPL1
SENP1
DNAAF2
SUPT7L
SLC4A1AP
AFF1
MTMR2
HEMK1
RPAP2
GLMN
SBNO2
UBE2J1
XRN2
USP45
MPP5
RNF146
FBXL12
TAS2R9
SLC7A6OS
PRMT7