ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236747 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◣ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RWDD1
EFTUD2
CCDC103
HADHB
HADHA
NUP85
SUDS3
GOSR2
RABL2B
SLC35B1
PSMD12
ZNF335
MRPS7
GGA3
NVL
RBBP5
RABL2A
CACTIN
NME6
PNO1
TSNAX
POLR3F
DZANK1
ZRANB2
REXO1
RPS12
MAPKAPK5
BLCAP
PAK1IP1
C6orf52
VTI1B
PI4KB
TSN
HSPA9
POLR2E
COX7A2L
C19orf48
VDAC2
NUP205
STAM
RABGGTB
DDX39B
ISCU
SART3
PSMD1
RPS27A
CLHC1
DYNC1LI2
SEC61B
ALG2
EXOSC5
BCKDHA
XPNPEP3
ST13
RPL21
C17orf80
FAM104A
FARSB
SELENOF
HS2ST1
TMED1
PSMG2
CEP76
LYRM4
FARS2
USP1
SUPV3L1
STAM2
DCTN1
OAZ3
MRPL9
SMC2
IRGQ
ZNF576
BAG6
UFM1
NDUFA4
NCLN
ATP5MG
TBCK
AIMP1
PES1
RPS29
LRR1
UPF2
CAPRIN1
SUCLG1
COMMD1
CCT4
VARS1
RPS23
ATP6AP1L
ANAPC7
GOLGA5
IQCG
RPL35A
TTC8
PCBP1
MRPS5
PROSER1
NHLRC3
SRD5A1
PDAP1
BUD31
ADK
AP3M1
ICE1
IPO13
SKP1
EIF4ENIF1
CDC73
DPH6
GORAB
STK36
RNF25
C16orf91
RPN1
OSGEP
APEX1
SF3B3
COG4
PIN4
NDUFA10
ARHGAP11A-SCG5
ARHGAP11A
TM9SF1
PAF1
MTRNR2L8
MLEC
RBKS
BABAM2
CD24
TAF9
RAD17
AK6
CCDC43
PTGES2
ACTR10
MRPL38
GTF3C4
DDX31
AXDND1
GADD45GIP1
RPS10-NUDT3
RPS10
EIF4H
DUSP12
HSPA1B
CNPY2
PCGF1
ZNF383
EIF2S3
RPL7
RDH10
SRSF11
LRRC40
UBE2I
BICRA
MFAP4
WRAP53
NFATC4
MRTO4
EMC1
ALKBH5
RPS24
MAD2L1BP
APBA1
SEC11C
NELFA
GLT8D1
SPCS1
CS
TCHP
PPP1R18
LRRC43
DDX1
MEPCE
ZCWPW1
GMEB2
FAM162A
CCDC58
RP1L1
HSPE1-MOB4
HSPE1
HSPD1
QPRT
ZBTB18
CHD8
PLEKHA6
SNRPD2
QPCTL
PRPF6
TSPAN11
PDHX
APIP
GGA1
TIAM2
CYTH3
PKN2
ARSG
LEMD2
PAGR1
TIMM10
RPL27
RBM25
TOMM20
TXNDC11
RUNDC3A
KRTAP3-3
STAT3
ANK3
CD9
CBX3
HNRNPA2B1
PHOX2B
MYOG
IL6ST
PRPF3
UNC5A
GBA
CBFA2T2
TLX2
SERTAD3
CIAO2A
FAM222B
RAB26
METTL16
CPVL
CHN2
KTI12
CIPC
TMEM244
MAN2C1
MEMO1
MTRNR2L2
AIG1
TBPL1
ANKLE2
KIAA0319
DBNDD1
MEGF6
ZNF521
EYS
MYCN
UFSP2
DDIT3
GPRIN3
ARHGEF1
CCT7
PRADC1
VMP1
PTRH2
SH2B1
RCOR1
BRD4
MFSD6
UQCRC2
CMTR1
TRAP1
IDUA
VPS50
HEPACAM2
RUNX1T1
H4C15
H4C14
PAXBP1
SIRT4
BAZ2A
SPHK2
RPL18
SF3B2
ZNF629
TLN1
CREB3
PTPN13
ACVR1
SEPTIN9
TNFRSF19
HCFC2
GLT8D2
UBAP2
PAN2
MDC1
WDR74
KCNK2
TCF4
PRPSAP1
MLF2
TCP1
MRPL18
CLTC
CALR
TBC1D16
CCDC40
PCBD2
MRPL58
NEUROG2
ZGPAT
ARFRP1
NEUROG3
HES1
PDE12
RARB
SKIL
SPATC1L
VEZT
FGD6
FLOT1
SP2
PMAIP1
HOXA4
NDUFS7
NEUROG1
ATOH1
RARA
DHRS3
KAT6B
BNIP3
BBS9
GPR108
NEURL2
CTSA
IGFBP2
TTI2
ZNF746
HOXA2
DNM2
TPRA1
ID2
P4HB
TEPSIN
NDUFAF8
MINDY2
NPAS4
CCNDBP1
TBX2
CLGN
RAB5B
KANSL3
STX18
ZFHX3
DONSON
DOLPP1
CAMTA1
PDHB
SP5
ATF6
TLE4
ANK2
OTUD7B
UPF3A
RBPJ
KATNB1
PANK2
CCDC174
FRA10AC1
ZNF687
PGK1
HUS1
SMARCD2
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
GATA4
FOXP1
NRL
DPP9
TBX3
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
KIF21B
ARRDC4
ST18
PDE4D
NFKBIA
TLE2
HOXA3
IQSEC3
POLDIP3
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
MRPL34
INSM1
STIP1
RNF207
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
KAZALD1
MACROH2A1
GPCPD1
HNRNPD
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
MTF2
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
POLG
KNL1
HEXIM2
DAGLB
SHF
MYRIP
ANKRD28
FBXO31
SACM1L
SMG6
KDM3A
PRMT5
RBBP7
EIF3D
SLC30A4
DIABLO
SREBF1
NLK
RAB37
COX5A
ZNF503
RHBDD1
RTN4
SERPINE1
CBX5
CEP41
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
NCOA2
G3BP1
EFEMP2
CDS2
USP42
ARID4A
DUSP9
ILF2
PNKD
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
MBD2
KMT2A
ROGDI
NRSN2
NR2C1
BFSP1
TOP2A
TCTEX1D4
BTBD19
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
PRDM10
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
ACYP1
MAF1
SCAP
ADM
CMSS1
GFOD1
EPM2A
EXOSC4
YTHDF2
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
PRDM12
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
CALM2
BRWD1
HNRNPC
TANK
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
H4C12
MVD
CYCS
LPIN1
ZNF148
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
HOXC5
LRRC59
CCDC107
DNAJB1
POLR2J3
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
NKIRAS1
C8orf37
GLRX5
NFE2
ARHGAP24
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
LIN28A
GATD3B
GATD3A
CIC
ETV4
MYADM
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
SKIV2L
NELFE
DYNLT1
PSMD9
HPD
HINT2
TOMM40
MEF2C
USP3
ACTL6A
TMEM9
SPIN1
L1CAM
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
REC8
PARP2
GLRA1
HMGN4
LZTFL1
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
AP3M2
CNPY3
PGP
C16orf54
CLDN2
ELF1
LDLR
RPS6KA1
MAP11
MFN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
NBN
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
KAT6A
ZBTB45
E2F3
SERTAD2
NADK
NBEAL2
MAPKAPK3
CISH
TBC1D8
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
PIK3AP1
DZIP3
CIP2A
MTHFR
WBP4
NME1-NME2
NME1
DGKZ
WNT10B
PTP4A2
CD38
TOM1L2
DRC3
SLC35E2A
EIF4A3
CLIC4
PLIN2
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FGFRL1
FAM110A
TMEM217
TBC1D22B
C12orf65
LFNG
IDH1
FGR
MED23
RPS8
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
BCAR3
SLC25A25
H4C3
TMX2
MED19
PEX2
KLF17
TRIAP1
FLAD1
ZDHHC4
MIA2
FGA
OTX1
MRPS23
SERPINB6
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
DDX3X
CLK2
VANGL2
TOB2
ZC3H6
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
BNIP2
DUS1L
C6orf89
KATNA1
UBL7
TOP1MT
PLEKHA7
PHF8
RCL1
PPP1R13B
THUMPD3
PMPCB
SDE2
SLC25A6
NFE2L2
C6orf136
IL27
SLC33A1
ZNF341
BDH1
MLLT11
CDC42SE1
TBCCD1
MGST2
ASB1
SLC25A45
HAL
SHFL
TRAF2
RECQL
GOLT1B
STK11
SPATA1
MCU
DENND2D
TEDC1
BZW2
TIMM44
UGP2
HERC5
NREP
KBTBD2
TRABD
SAXO2
FNTA
EFL1
CTNNB1
RXRA
PPIB
AHCY
PA2G4
PACSIN2
IST1
PHPT1
MVK
R3HCC1
UPP1
ATF3
FDFT1
ACACA
ZNF414
COQ10A
LRRC45
CENPX
UROD
HECTD3
GDPGP1
CIB1
ZBTB20
ABCA12
RCOR3
SRRM3
PLCB2
LRRC37A3
MC1R
DROSHA
C5orf22
RASGRP2
CDC25C
DUSP4
HHAT
MYT1L
BOD1L1
DDIT4
FAM120B
NMNAT1
LZIC
SRP9
ZBTB17
TMEM248
RGPD2
RGPD1
RPLP0
PPP2R5A
METTL26
FDPS
CENPA
PIM1