ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671313 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◣ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

KNL1
WDR74
SHF
PPP6R3
PRMT5
B4GAT1
SACM1L
HMGN4
NDUFS7
MTRNR2L2
POLR3E
H4C8
DPP9
FBXO31
POLG
ILF2
CCDC107
LTA4H
LUC7L2
FMC1-LUC7L2
FMC1
METTL26
GSTA4
C8orf37
RAB11A
ANG
ELF1
WBP4
TMEM259
HSPA6
STAT6
SMARCC2
RPS29
BCAR3
TTI2
MTRNR2L8
TBL1X
CASC3
PPEF1
POLDIP3
RNASE4
MED16
DHRS3
DDIT4
NCOA7
CSRNP1
ZNF827
FAM227B
DTWD1
BZW2
ANKMY2
TIA1
STX16
GTF2H2C_2
GTF2H2
RBFOX2
SELENOH
GSTCD
INTS12
PRKCE
ZSCAN22
ZNF839
OR1F1
GBA
SERPINE1
HMGB1
USPL1
YARS1
S100PBP
SIRT4
FRA10AC1
TMEM248
NME1-NME2
NME1
IARS1
H4C15
H4C14
ATXN2L
MAP3K20
ANP32E
MAT2A
FLOT1
STX18
MRPS31
H4C12
URGCP
UBE2D4
RBBP5
MNAT1
MRPL40
HIRA
LASP1
RPL37
NFIL3
NFE2L2
GADD45A
ZBTB45
GTF2H2C
EIF4A3
TRIAP1
SLC44A1
C17orf75
MYC
CCN5
JUNB
AAR2
RPGR
GABARAPL1
SLC19A2
KLF7
UCHL5
RO60
DNAJC19
MRPL53
LRRC59
PUS1
TRIB1
ARIH1
FAN1
P3H1
PSMF1
TAMM41
NUF2
INO80C
LEMD2
CCNL1
GTF3C3
KRBA2
BTN3A2
H4C5
ARID1A
RANBP2
DTNA
WDR36
MCIDAS
RPS7
NDUFS3
KBTBD4
MKRN3
CCAR2
WDR24
FUS
H1-2
TACO1
SAR1B
SOD2
ZC3H10
VEGFA
ATF3
MRPL17
AP3S2
TIMM44
EIF4G2
TOB2
MRPL21
IGHMBP2
DEF6
H2AX
COMMD1
H2BC10
VWA7
TPM2
STAT3
HAL
FAM43A
OPA1
ABCG1
NLRX1
ZNF142
BCS1L
SEC13
H4C2
SLCO2A1
JUN
FEM1C
RPA3
FAM107B
MFSD11
SRSF2
SYCE2
RNF207
MRPL44
SRSF6
STAU1
DDX27
COX16
LPIN3
LY6K
WTAP
LRRC37A3
EIF1AD
BANF1
TBC1D19
RICTOR
SLTM
PSMD9
HPD
POLR2C
ATP1B3
SCNN1A
CITED2
ARHGEF12
TRAF7
HNRNPD
FEM1B
AQR
ID2
DRAP1
C11orf68
SSNA1
ANAPC2
MAP2K2
GLIPR1L1
BTG1
TP53I3
THUMPD1
TCAF2
TMEM242
PTPRM
BEND6
TPK1
PARL
NUP107
SOD1
NDUFS4
TSHZ2
MAML3
RPL22L1
MTREX
DHX29
TSPAN4
SRRM3
EPRS1
YBEY
MCM3AP
FANCI
SCNN1G
ITGB3BP
EFCAB7
NECAP2
MPHOSPH10
MCEE
INTS6
MTF2
SLC24A1
INTS14
TNPO1
PAFAH2
CAMK2D
TRIP4
PEX3
ADAT2
SF3A3
IMPDH2
ETS2
SSRP1
ACBD4
CALM2
DCP1A
SLC35A3
CDPF1
ZNHIT6
LTBR
CTNNB1
MRPL39
RAD54L2
PHACTR4
RSRP1
LIMS1
ZNF460
IKZF5
ACADSB
SEC31A
CDK6
TTC4
TAF10
TMSB4X
COPS8
OSBPL8
CLUAP1
PBLD
HNRNPH3
B2M
H4C4
HSP90AB1
POLR3B
SIAH1
NUP54
ALOXE3
RTN4
GARS1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SELENOW
ZSCAN9
NAA80
HYAL3
H4C11
S100A2
SUMF2
GOSR1
SLC27A4
MMS19
UBTD1
NLE1
GPN3
FAM216A
HPS5
GTF2H1
NUDT9
ADK
HES3
ACYP1
ZC2HC1C
TSEN15
DSTYK
RTEL1
IGF2BP2
SLC33A1
ASH1L
R3HDM2
CEP120
NDUFA12
C19orf53
TMEM167B
USP30
DUS2
DDX28
SURF6
NMT2
KDM2A
TRIP11
NR1H3
ACP2
HES4
AHCY
TRIB3
CCNC
HEXIM1
TOMM5
RPL28
NSUN4
RAD50
MED23
ASNS
TRMO
H1-4
TMX4
FAM126A
CFAP410
LSG1
SRSF4
KANSL3
ZC3H6
G6PC3
GPAT3
USP38
CETN3
FOXJ3
DR1
USP48
TM2D1
DVL2
PDPK1
SLC38A2
VPS33A
SPRED2
HIF3A
IL4I1
NUP62
ATF5
H4C3
SNAPC5
PPM1A
KLHL20
CCND1
DMAP1
TBC1D9
MGST1
WDR11
GPAM
MTERF1
FTL
NMNAT1
LZIC
DPY19L4
FBXO4
SRSF7
SREK1IP1
CWC27
GEMIN5
BIRC3
TUT1
ZMPSTE24
ZNF843
AXL
STK17B
ARL14EP
DCAF10
DNAJC9
PPA2
AARSD1
ZNF696
ARID5B
FUT8
TAF12
MTIF2
TFAM
RNF121
LOC100133315
PFKFB3
NABP1
RPS15
MRPL12
SLC38A1
DBNL
TMEM268
C12orf65
NFKBIZ
ABHD14B
ABHD14A-ACY1
ABHD14A
PCCB
IRX2
C5orf38
ANK2
HTR5A
MEPCE
CCDC59
ZCWPW1
GATD3B
GATD3A
EIF3B
ZNFX1
CFLAR
TMSB10
TRAF6
RAG1
CXCL8
NCAPG
SEC22B
DNAJC24
DCDC1
POLR2J3
R3HCC1
SSBP2
PCID2
CUL4A
SNRPD1
EXOSC6
RPL12
LRSAM1
PLD1
NAT10
SMG7
RBM28
SLC7A11
DYM
SNX18
SCYL3
IFTAP
KDM1A
COMMD2
NDUFC2-KCTD14
NDUFC2
SCFD1
SVIL
NFKB1
EIF2D
ZFP36L1
MAP3K8
RAB5IF
IL1RAP
SRSF1
MCAT
SLC16A7
NPAS4
TGIF1
TRMU
TM4SF1
HEXB
C2orf42
CAAP1
FGD4
VRK2
CHPT1
EIF4EBP1
ZNF292
NREP
SLC25A51
LRRC57
HAUS2
MRPS2
C9orf116
APTX
DNAJA1
CPNE8
PARP2
ARID2
NGLY1
OXSM
EDC4
SOS1
RAB18
VSNL1
RPL32
FAT4
SLC35E2A
CIAO3
MAP1LC3B2
SPOP
CEMP1
RBM45
MTMR2
ALG10
DDX1
FNTA
ETFDH
C4orf46
SNX17
EIF2B4
ELF2
MDP1
MOB4
BRIX1
PUM2
SMARCD3
MEF2C
NOL7
SLC39A1
RBM18
MRRF
ETS1
CREB3L4
PRPF39
HUS1
ZNF414
RFFL
TARDBP
AGK
U2SURP
COX7A2
TSSC4
BLOC1S6
CCDC174
SLC1A5
PMPCA
ENTR1
GPBP1
TTC26
G3BP1
POR
FAM162A
CCDC58
PRDM1
CDK5RAP1
SEC24A
STK40
INTS4
MEIS1
MRPL3
TOR1AIP1
FBXW11
TMEM184A
HRCT1
NDUFS5
MRPL58
CHD1L
USP8
UFL1
PRKAB2
NUP153
ZNF221
EMP1
TAB1
MTLN
RAPGEF1
MSANTD3
SH2B1
XYLB
C12orf43
TBX3
LSMEM1
RSPH3
ZNF721
PIGG
MRPS35
PLK2
PSMD3
WDR25
WARS1
FAF1
ERI1
TM4SF19
PNP
RNF43
MCOLN1
TIMM17A
RPL5
MRPL48
HARS2
HARS1
MRPL35
MAPRE2
B3GALT4
ARMCX5-GPRASP2
ARMCX5
FKBP11
MEMO1
NDUFAF1
GEMIN8
VPS36
MSL2
CLCF1
HDAC7
CALM1
SLC3A2
RPS4X
VIM
SLC39A8
P2RX7
TEFM
STOML2
CD320
WDFY1
TNFRSF9
GFM1
BCAT1
RNF150
TCHP
PTK6
DAGLB
MARCHF4
RINT1
LAMTOR5
SDAD1
IQCH
AAGAB
HMGCR
RPL22
ITPR1
NOB1
TOLLIP
MRPS16
ERCC6L2
SUGCT
MPLKIP
AHCYL1
CLK1
RPLP1
TMA16
ITGB1
VPS25
C3
SDHAF3
GDF15
DDX46
HDAC2
SAV1
BRF2
TAF5
KLRC2
RXRA
PPP4R2
KCTD5
MTHFD2
RETSAT
PIWIL2
ZNF23
TIAL1
RABGGTA
MYNN
YARS2
PEX6
NNMT
PCBP2
EIF2B3
NEURL2
CTSA
MRPL20
TMEM101
DYNC2I1
CCDC125
NIM1K
MINDY2
MTCH2
PPWD1
CENPK
TRUB2
COQ4
HEY1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
UPF2
PES1
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
RBKS
BABAM2
TTC8
SUPV3L1
SART3
IQCG
DPH6
VARS1
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
BAG6
CCT4
SF3B3
COG4
OSGEP
APEX1
PAF1
TM9SF1
NEUROG2
DDX39B
ZGPAT
ARFRP1
LRR1
NEUROG3
PTGES2
PIN4
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
PDE12
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
RARB
STK36
RNF25
MRTO4
EMC1
SKIL
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
SP2
PMAIP1
C16orf91
HOXA4
RPN1
GTF3C4
DDX31
GORAB
NEUROG1
ATOH1
CNPY2
RARA
KAT6B
BNIP3
ZNF383
BBS9
GPR108
IGFBP2
MRPL38
GLT8D1
PDHX
APIP
ZNF746
PCBD2
HOXA2
DNM2
TPRA1
ANKLE2
P4HB
TEPSIN
NDUFAF8
ALKBH5
RPS10-NUDT3
RPS10
AXDND1
CCNDBP1
TBX2
CLGN
RAB5B
ZFHX3
DONSON
DOLPP1
CAMTA1
HSPA1B
CBFA2T2
PDHB
SP5
ATF6
TLE4
OTUD7B
UPF3A
RBPJ
KATNB1
PANK2
ZNF687
PGK1
SMARCD2
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
QPRT
GATA4
FOXP1
NRL
SRSF11
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
KIF21B
LRRC40
ARRDC4
ST18
PDE4D
NFKBIA
ARSG
SPCS1
TLE2
HOXA3
IQSEC3
TNFRSF19
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
MRPL34
INSM1
STIP1
ATP5F1B
SLC45A4
CBX3
MDM2
LPCAT3
KMT5A
KAZALD1
RUNX1T1
CS
MACROH2A1
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
NELFA
EIF2AK3
METTL11B
GADD45G
TMEM70
KCNAB2
PKN2
HEXIM2
MLEC
MYRIP
ANKRD28
CCDC43
SMG6
KDM3A
RBBP7
EIF3D
SLC30A4
DIABLO
SREBF1
NLK
RAB37
COX5A
ZNF503
RHBDD1
CBX5
CEP41
HNMT
SERPINB1
NKD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
NCOA2
EFEMP2
CDS2
EIF4H
USP42
ARID4A
DUSP9
KIAA0319
PNKD
TXNDC11
TDRKH