ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814860 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◣ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
TBX2
EIF3D
RFPL1
HTR3B
TBX3
MFSD6
SEMA5B
DIABLO
STARD4
FRA10AC1
PIK3C2G
CBFA2T2
NRSN1
KIAA0319
AOPEP
MTRNR2L2
ABCA12
MYT1L
LSMEM1
ZNF148
STX18
TNFRSF19
SCHIP1
DRGX
DEFB130B
DEFB130A
ZNF335
RGS7BP
RAPGEF2
MYRFL
KIF1A
HNMT
PTPRR
TTI2
HOXC6
HOXC4
MTRNR2L8
DLC1
POLR2E
QPRT
ATP5MG
RARB
DUSP6
IMPG2
RP1L1
GRWD1
NOMO3
NOMO2
RABL2B
RPS29
ISCU
SART3
FGL1
ZFHX3
NOMO1
RWDD1
UFM1
OTOR
PAM
RABEPK
EXOSC5
BCKDHA
TYRP1
RBBP5
PHOX2A
IQCG
RPL35A
SNX6
GOSR2
DAB2IP
SUDS3
COX7A2L
RPS12
GTDC1
AMBN
SEC61B
ALG2
TCF4
CHRNA9
PSMD12
PES1
RPS23
ATP6AP1L
HAO1
P2RY12
RUNX1T1
TSNAX
NBN
FARSB
BRD4
ANK2
NUP205
ELAVL4
KCNK2
EFTUD2
CCDC103
BLCAP
SOX5
POLR3F
DZANK1
ABAT
DNAH8
CCDC182
ZNF608
C19orf48
STARD13
SRD5A1
CACTIN
LYRM4
FARS2
CRYGC
UBA5
C17orf80
FAM104A
NUP85
RPL21
AGR3
RIMS1
FCER1A
NVL
ANAPC7
MARCOL
RARA
DHRS3
LMO1
ADK
AP3M1
IL17F
ALG5
HHAT
PSMD1
PDAP1
BUD31
SPAG9
SPATS1
EYS
SUPV3L1
GOLGA5
SRPK2
HSPA9
DDX39B
ZFHX4
PI4KB
OAZ3
MRPL9
UPF2
STK36
RNF25
ANKDD1B
MYT1
SLC25A44
MRPS7
GGA3
SF3B3
COG4
TMED1
GPR83
MAP3K3
TRIM24
SLC7A2
DYNC1LI2
DEFB136
B4GAT1
CHRDL2
OSGEP
APEX1
FLVCR1
LNP1
PCGF1
ESRRG
PCDH15
RABL2A
PAK1IP1
C6orf52
MCU
CDC42EP3
VDAC2
PWWP2B
CLIP4
OIP5
NUSAP1
MPP4
RFLNA
BCO2
KLHL24
CDH12
VTI1B
SSUH2
ANKRD44
VPS33B
TMC3
NDUFA4
ESRRB
ZNF235
KCNJ16
GUCA1C
GALNT14
ACTR10
KIF6
TIAM2
BAG6
RNF111
MKRN3
REXO1
WDR49
GLRX
GABRA1
PSD3
PIN4
SORBS2
PHACTR2
SMC2
IRS2
RIMBP2
EGFR
SUCNR1
CYTH3
HECW2
HEXIM2
PDE4B
SHC4
SYBU
HADHB
HADHA
IL13RA2
SUCLG1
NEURL2
CTSA
MAP4
SLC35B1
SCRG1
MAPKAPK5
MFSD11
GPR1
MAPK10
TOM1L1
TXNRD1
BBS9
STAM
SAMD13
TBC1D9
ADGRD1
ZRANB2
PHOX2B
SKP1
NCAM2
PLCH1
MLLT11
CDC42SE1
NREP
PUS7L
IRAK4
DMD
RABGAP1L
C8A
RBP1
CALHM5
TM4SF4
OSBPL7
CCKAR
CHODL
ETFRF1
CFAP94
PALMD
SLC26A7
POLR3A
ZNF8
CLCN3
PBX2
SLC8A1
CLGN
CAPRIN1
PROSER1
NHLRC3
ASXL2
ARHGEF12
FNIP2
ADD3
EFCAB2
SLC25A12
TMEM187
MBNL3
TAMALIN
USO1
HAND2
MEF2C
FHL1
PCNX4
BCL9L
P2RY6
ELAVL2
TBCK
AIMP1
NRG1
FAM110B
CREB3L2
PNO1
SULT6B1
CEBPZOS
SOAT1
ARHGAP19
MGP
NCOA6
FEV
ARHGEF33
GFRA3
XPNPEP3
ST13
GORAB
MOB4
TTC13
GSE1
ASB15
C16orf91
ADAMTSL2
RPL7
RDH10
OSBPL8
ZBTB18
LRRN3
POPDC2
ATP6V0E2
RABGGTB
PDE12
AXDND1
CHD8
LRIT2
MCC
CERS3
MFSD8
ABHD18
HDX
HEXB
ABLIM1
SAMD9L
CD36
PDE4D
DCTN1
SYTL3
RSPRY1
PSME3IP1
CABLES1
ZNF503
HDAC9
ERVFRD-1
NCLN
RPS27A
CLHC1
OPTN
CCDC3
DBH
H2BC5
ATXN7L3B
BDNF
CD200R1
MAP2K4
FGF1
CS
RSRC1
PTGES2
ATP2C1
DPH6
TLE4
RARG
PTPRB
STAM2
POLDIP3
GGT1
PRSS58
PI15
CDC73
SELENOF
HS2ST1
OTUD4
ERMP1
C1orf185
TAF9
RAD17
AK6
GPM6B
SNAP91
ZNF736
TM2D1
CNPY2
AP2A2
CD302
NET1
EXTL2
LIX1
PKIA
SMIM20
RAPGEF4
UBA3
CREB5
CCND1
GRXCR1
RFESD
ITGAV
NALCN
CCSER1
NCALD
TMX4
REC8
PIK3AP1
TNFSF13B
GRAP2
B3GALT2
USP1
TAS2R20
GPRC5A
SULT1C4
PNN
SOX4
MTMR4
KCNJ8
ARHGAP11A-SCG5
ARHGAP11A
CBX5
NKX6-1
CHRM5
HIBADH
TLX2
EIF4ENIF1
P2RX6
NR2F1
ELF1
LIN28B
ABCB8
LRGUK
SMIM18
NME6
ELMO1
CYTH1
SLC26A11
SGSH
HYKK
DKC1
TLR7
MEPE
ID2
CFAP20
ICE1
CXXC4
ANO3
PTPRO
CLU
NEO1
NFAM1
DMC1
SLC25A46
NBEA
ZFP30
PCDHAC2
MAB21L1
PKDCC
STAP1
IRGQ
ZNF576
IRF9
RGPD2
RGPD1
FNBP4
FBXO9
FFAR3
STRA6
RNF19A
TRAF3IP2
MYLK4
SNAI2
LMO7
RUFY3
PLEKHG2
NDUFA10
SHF
IGF2BP3
GPR85
UNC80
DIPK1A
CALM2
JMJD1C
AP1S2
PAF1
RPN1
ZNF383
DDX46
FFAR2
DZIP3
CIP2A
GTF3C4
DDX31
OXR1
LRRC8B
LGSN
MINDY2
AMMECR1
BAZ1A
DUSP26
RAG2
CYLC2
CASP4
MYH15
CTSS
TOMM34
SYT16
LOC645177
C12orf77
PCDHGC4
IPO13
TM9SF1
EIF2S3
TXNDC11
PYROXD2
KIFBP
THBS2
FMO1
PRMT5
CDKN2D
CLDN22
CLVS1
PJVK
KBTBD3
DDX52
HTR1F
ANO1
GRSF1
SCAF11
GEMIN8
LRR1
TBL1X
SLC7A11
MGAT4C
DDR2
TMED7-TICAM2
TMED7
ZNF219
DCTD
DCBLD2
TMEM253
RPS10-NUDT3
RPS10
CAMTA1
SLC25A45
LDHA
KIFC1
PPARD
ID3
HMGA1
BRINP3
PDC
UBE2D3
FHL2
RPS24
PHLDA1
KCNIP4
DLG2
RGL1
TMEM126B
TMEM45B
VOPP1
MACIR
GARNL3
PLEKHA6
RGMA
IFT81
SH2B1
YPEL5
DHTKD1
UPP2
GRAMD4
KIF26B
KCNA10
ADGRL2
PPP1R2
RPUSD2
CNTN1
COX7A2
DCLK1
GRIA1
GPATCH8
LANCL1
CPS1
HSPA1L
HSPA1A
SCML4
FAM107B
ZMYM2
LYN
NEFM
CNTNAP4
CMC2
SLC18A1
RBKS
BABAM2
HOXA3
ELOVL6
ACTA2
MBNL1
SCN2A
DBT
THYN1
ACAD8
KLKB1
RBP3
TFDP2
RXFP4
GFOD1
TCF12
HSD17B11
ARHGAP18
SIAH3
DENR
GLCCI1
MTUS1
SHOX2
HSPA1B
SHB
HOXC5
ATF3
CEP70
APBA1
NAP1L1
CACFD1
UGT2B7
WDHD1
SOCS4
PTGR2
TRAPPC3L
NCOA7
PSMD4
GEMIN2
UBE2L5
NFKBIZ
PSMG2
CEP76
GADD45GIP1
MEPCE
ZCWPW1
RGMB
BICRAL
FNDC5
TRPM4
SH2D4B
LARP4
LINGO2
MAP2
WNT5B
DIRAS3
ATRX
RHBDD1
ZMAT4
NCOA2
CCPG1
C15orf65
CLK2
SHD
HSDL2
ATF7IP
METTL7A
P2RY14
FAR2
PAAF1
BOD1
CMSS1
FILIP1L
DIMT1
KLHL32
ZNF703
IRF2BPL
DNAJC19
NRXN1
SH3BP5
RBM25
TJP2
C5orf63
PUM2
GABRG2
MAB21L2
ARHGEF10L
BRD2
ZBTB20
MDC1
TMEM218
SUOX
ZNF81
MAGEB3
CPB1
BLMH
DDX6
DPAGT1
CCDC59
CHD6
EEF1AKNMT
PEX2
REPS1
ST3GAL6
UBXN2A
TM4SF1
SCG2
NIPSNAP3A
PARP2
SENP6
MB21D2
PIK3R1
WASF1
LIMCH1
ZNF770
DDC
MTHFS
UNC79
BTBD7
BICRA
H3C12
LRIG2
TNFSF18
CRISPLD1
DONSON
COQ10B
CRABP2
CALD1
MEIS3
GTPBP1
MYL1
MRPL38
CCDC174
NRL
DCAF11
RAI14
VANGL2
AP3S2
EGLN2
CNOT10
FEM1A
PRR13
GTF2H5
AMBRA1
TMEM243
SLC4A5
SEMA4B
CHD7
ZNF76
FGD4
EIF4EBP1
KRT28
SLITRK6
RNF7
NRCAM
PHGDH
PCDHB4
ST8SIA4
ST7
ZNF780B
PTH2R
CEP41
KMT5C
TNRC18
VEPH1
TTC8
DNAJA2
OLFML3
PCDHGC3
FLOT1
TLE2
CTR9
ZBED3
ACTB
BCAT1
PSMA6
RIOX1
CEP128
FRMD3
NPAS1
POMT2
GSTZ1
WFIKKN2
IL33
UGT2B11
SMCO1
GATA4
TBL1XR1
CSNK1A1
ZNRF2
AMOTL1
PCBP1
SYNPO2
TP53BP1
HEBP2
WBP4
KPNA2
SLC17A2
FDCSP
BAZ2A
CHD9
ZBTB38
RAB3GAP2
SEC24B
GHR
VARS1
HNRNPH1
RNF14
RBM12
CPNE1
GOLPH3L
CNIH1
LPAR6
LUM
UBE2I
EPM2A
SCOC
CAMLG
TTC21B
NEIL2
DHX16
BATF2
TERF1
C15orf62
GPBAR1
TOMM40L
PGAP1
DEGS1
SEMA3A
LIPC
MMRN1
HAS3
ECM2
UBE2J1
PRRC2A
HLCS
PPHLN1
MARCKS
ZNF510
DCLRE1B
AP4B1
CLASP2
JPT1
MAPK1IP1L
CHD1
PALLD
ACACB
OGA
CTNND1
COG3
SLC35F2
SEC14L1
OPA1
UAP1
CHEK1
TACC2
CLOCK
PGBD5
CNTN5
ARHGAP28
EYA1
POLG
SETX
KIDINS220
SLC30A7
APBA2
CGA
LPCAT3
KMT5A
TDRKH
LATS1
CHN1
PRKAG2
RELN
OTUD7B
KMT2A
GOLGA7
CSRNP3
SKIDA1
PACRG
CDIN1
PLN
NYAP2
MRPS5
SEC11C
MYADM
PPP1R3D
FAM217B
ETFA
RMDN2
ANAPC15
SMDT1
TK2
GNG4
DUSP23
HOXC10
GABARAPL2
SLA
JAKMIP2
PRKACB
SIX2
PLCXD3
TMEM65
CHD1L
SLC4A7
PROS1
POLR1D
LNX2
MLLT10
RAB3C
CD200
NCAM1
NNT
UTP23
BLOC1S5
IQUB
MAPRE2
CEP126
NT5C3A
KLF7
CCNT1
MRPS18B
DPYSL3
SPINK6
SDE2
TSACC
SIAH2
DCT
RPRD2
KCNT2
DCTN6
UTRN
PRSS3
FOXP1
ANP32E
GSTCD
NXPE3
RXYLT1
PLPP5
CREBL2
DNM1L
PPP2R2B
THY1
DPP6
AIG1
SAP18
UBQLN2
SETD7
QDPR
AGTR1
LMO3
TSN
CCDC43
KBTBD2
POU2F1
MEIS1
CELF1
TAF13
IQCB1
EAF2
MTERF1
ABCF3
SLC18B1
TPH2
MAML1
FAM98B
OXCT1
IL19
ANKRD6
MC4R
ADCYAP1
NSUN3
DHFR2
LETM2
SLC23A1
OR6S1
IL22
TARS1
DNAJC1
TAS2R7
PWWP2A
RMND1
ARMT1
USP9X
ALG10B
LINGO1
CCNG1
THG1L
CNKSR3
CCNH
BMP5
BIRC6
ABL1
RNF145
HSD17B7
C7orf33
FBRS
SPG21
C2CD5
RPL22L1
MAST4
PDP1
MTA3
ZBTB10
C8orf48
NFKBIA
TMEM9
HBP1