ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◣ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
SUDS3
PSMG2
CEP76
IPO13
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
EFTUD2
CCDC103
NUP85
SRD5A1
RPL21
POLR2E
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
GOSR2
VARS1
BBS9
MRPS5
IRGQ
ZNF576
UPF2
TSN
PAK1IP1
C6orf52
PSMD12
RPS23
ATP6AP1L
DPH6
ATP5MG
GOLGA5
CAPRIN1
EIF4ENIF1
C19orf48
IQCG
RPL35A
SEC61B
ALG2
SMC2
TTC8
PES1
RBKS
BABAM2
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
PI4KB
RBBP5
PNO1
ACTR10
TMED1
SUPV3L1
NDUFA4
USP1
ZRANB2
ISCU
SART3
RBPJ
C17orf80
FAM104A
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
XPNPEP3
ST13
UFM1
ZFHX3
PROSER1
NHLRC3
RPS27A
CLHC1
CLGN
PCBP1
LTBR
SCNN1A
RPS12
PTK2B
C12orf29
ZGPAT
ARFRP1
ZNF608
CDC42EP3
NEO1
PTGES2
SF3B3
COG4
PAF1
NSUN6
ARL5B
TLE2
PDE12
VANGL2
BAG6
NR2F1
HEXIM2
RBMS3
GATA4
GABRB2
MYRIP
CCNDBP1
HEY2
MRTO4
EMC1
GADD45GIP1
MBD2
NDUFA10
KCNIP4
EIF2S3
ACOT2
RPS29
LRR1
SLC30A4
ST7
ZNF383
MSX2
DIAPH3
ZNF746
SUCLG1
ARHGEF10L
LAMA3
HES1
CABIN1
CDC73
SEMA3E
ST18
TNK2
SKIL
DDX39B
BNIP3
RPL7
RDH10
CACYBP
PDHX
APIP
KAT6B
TBX2
SEC11C
LIN28A
RARA
TXNRD1
FREM2
ARHGAP11A-SCG5
ARHGAP11A
PIN4
TBC1D9
GORAB
HOXA1
OAZ3
MRPL9
FOXP1
ZFHX4
FMN1
TTI2
CDS1
PCBD2
PCDH15
SLC25A6
MGP
SMAGP
PRUNE2
SERTAD2
CNPY2
GTDC1
MKRN2
ARAP2
GLT8D1
SPCS1
ALKBH5
GTF3C4
DDX31
NDUFB3
FAM126B
FRRS1
CNR1
MET
EPM2A
RSRC1
CXXC4
ATOH1
GPR108
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
TAF9
RAD17
AK6
RPN1
GFRA1
NLGN1
TNFRSF19
ZNF395
CCDC59
OTUD7B
KDM3A
INKA2
IL20
SPAG17
RARG
DONSON
MYZAP
GCOM1
TIGD1
EIF4E2
TMEM70
SPIN1
BNIP2
ZNF341
GEMIN2
TMEM106B
PRTG
ID1
SLITRK6
DHRS3
MRPL34
ABHD8
B3GNT5
HOXA4
EIF3D
ACKR3
MEIS2
POGLUT3
DENR
SLC25A53
CFAP69
SCOC
STK36
RNF25
KMT2A
MAPRE1
TMPRSS11F
POLR3A
LIX1
MCU
REC8
CYP26A1
RUNX1T1
ELOVL6
ATXN2
PEX14
LMO1
ACOT1
NEFH
RNF207
SEPTIN2
HDLBP
REL
CISD1
IPMK
BRWD1
OSGIN2
COX5A
KAT6A
NELFA
RABGAP1L
CTF1
FGD3
C16orf91
USP34
APLN
SEMA6D
NXPH4
SHB
ADM
UBE2I
CALM2
H2BC5
ZNF385B
VPS33B
HUS1
ADAMTSL4
EOMES
PDHB
MYADM
TCF7
PRKD1
IGFBP2
SMARCD2
RBBP8NL
DNMBP
SPATC1L
CCDC174
PHIP
ZNF507
PDE4D
CS
YTHDF2
IMMP1L
ELP4
MIGA1
CRABP2
PXMP2
POLE
GFI1B
TSC1
STX19
KANSL3
SRSF11
LRRC40
ATXN1L
TRPM7
PCLO
TPRA1
EBAG9
OTUD4
ZBTB17
SSBP2
SYNJ2BP-COX16
SYNJ2BP
ACYP1
ZC2HC1C
CLCN3
COQ5
HSPA4L
UFSP1
DUSP9
TBX3
EIF4H
PDCL3
LOC100287896
LIPT2
NR2C2
MGST1
CBWD5
CBWD3
CBWD6
HNRNPD
ZDHHC17
ACBD6
RILPL1
ACTR3B
CDKL2
QPRT
RPRM
FAM168B
POU2F1
DLAT
TMSB4Y
TMPRSS12
SH2B1
CBX3
MTF2
HNRNPA2B1
ITGAV
UROS
BCCIP
VEPH1
CYP51A1
PRKAG2
PDE4DIP
SLC40A1
TLE4
GTF2IRD2B
KCNH1
NEUROG1
SORBS2
TANC2
LSM8
YEATS2
IMPA1
PRR13
IGF2BP3
KLHL32
MELTF
KCNS3
TMPPE
GLB1
CEP70
MEMO1
GPRC5A
EML5
BCAS2
TCHP
RASSF6
CCNC
JAK1
FANCL
BAG2
MTMR10
RTL6
POLR2J3
TAF1A
C2CD5
GGH
STX18
PCTP
PEX2
NCBP3
NRDE2
IFI16
PYDC5
ZNF3
MTMR2
MPP5
PTGES3
SFT2D2
CNOT10
CCDC102A
HOXA3
PXYLP1
UBE2V2
ZBED9
SNX3
TCF4
BIRC6
EID2
GPR37
SPECC1
ID3
EPHA6
NEUROG2
RIMS1
ATXN7L2
PIP4K2B
PALLD
CMSS1
FILIP1L
PARP4
EYA1
BAMBI
USP12
SLC36A4
PLIN2
COLEC12
FAM110A
PLEKHD1
C6orf136
RAB11FIP2
NEK3
CMTR1
ZNF384
TBC1D5
PLS1
CAPZA2
SULT1A1
BCAP29
RYBP
EFCAB2
TTK
ARHGEF5
PHACTR2
IFT22
SCAP
VWA8
PELI2
SBF2
RAI14
ZSCAN12
PPP1R13B
CRPPA
INPP5A
TXNDC11
KMT5C
ARL14EP
DRAM1
NUTM2E
FAM162A
CCDC58
EIF5
MRPS36
PIGU
ERCC6L2
SRSF10
WDR11
CEP41
SEMA4B
RHOBTB1
PIK3R1
FSTL3
C15orf61
ADAMTS7
NR2C1
MARCHF6
MGST2
ANKRD36C
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
MTRNR2L8
MTRNR2L2
RARB
VEZT
FGD6
BICRA
FLOT1
SP2
PMAIP1
NEURL2
CTSA
MRPL38
WDR74
DNM2
ANKLE2
P4HB
TEPSIN
NDUFAF8
MINDY2
NPAS4
AXDND1
RAB5B
DOLPP1
CAMTA1
HSPA1B
CBFA2T2
SP5
ATF6
ANK2
UPF3A
KATNB1
PANK2
FRA10AC1
ZNF687
PGK1
RFX1
XKR7
DUSP6
MTMR4
NRL
DPP9
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
KIF21B
ARRDC4
NFKBIA
ARSG
IQSEC3
POLDIP3
RMND5A
DCAF11
SP1
PCNA
OSBP
PPCDC
INSM1
STIP1
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
KAZALD1
MACROH2A1
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
PPP6R3
METTL11B
GADD45G
KCNAB2
POLG
PKN2
KNL1
DAGLB
SHF
MLEC
ANKRD28
FBXO31
CCDC43
SACM1L
SMG6
PRMT5
RBBP7
DIABLO
SREBF1
NLK
RAB37
ZNF503
RHBDD1
RTN4
SERPINE1
CBX5
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NCOA2
G3BP1
EFEMP2
CDS2
USP42
ARID4A
KIAA0319
ILF2
PNKD
TDRKH
HTR5A
AIFM2
TRIB1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
ROGDI
NRSN2
BFSP1
TOP2A
TCTEX1D4
BTBD19
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
PRDM10
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
CHD8
MAF1
GFOD1
EXOSC4
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PARK7
SEPTIN9
PRDM12
PCGF1
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
HSP90B1
HOXB4
DUSP12
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
GBA
HNRNPC
TANK
MEPCE
TRAF4
ATP23
MPV17L2
SLC25A19
ABHD2
ARNTL
CLK1
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
LPIN1
ZNF148
DDX1
HECTD4
ZCCHC3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
ZCWPW1
HOXC5
LRRC59
CCDC107
DNAJB1
TMEM94
KIAA0319L
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
CSRNP1
NKIRAS1
C8orf37
GLRX5
NFE2
ZBTB18
ARHGAP24
STAT3
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
ACVR1
GATD3B
GATD3A
CIC
ETV4
DSCAML1
NBPF1
MSMO1
NCOA7
FBXO41
CCNL1
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
ARHGEF1
SKIV2L
NELFE
DYNLT1
CD24
PSMD9
HPD
HINT2
TOMM40
SIRT4
MEF2C
USP3
ACTL6A
TMEM9
IL6ST
TLN1
CREB3
L1CAM
CPVL
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
CDCA7L
GFRA3
RPS24
CALR
PARP2
GLRA1
HMGN4
CLTC
LZTFL1
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
PLEKHA6
AP3M2
CNPY3
PGP
C16orf54
CLDN2
ELF1
LDLR
RPS6KA1
MAP11
MFN2
CHN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
CYBA
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
ZBTB45
E2F3
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TBC1D8
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
ACAT2
WDR25
WARS1
TMEM222
MAN2C1
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
MAD2L1BP
PIK3AP1
DZIP3
CIP2A
MTHFR
WBP4
NME1-NME2
NME1
DGKZ
WNT10B
PTP4A2
CD38