ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17639400 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◣ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

MTRNR2L8
ZGPAT
ARFRP1
MTRNR2L2
FLOT1
RBKS
BABAM2
LAPTM5
SKIL
SMIM20
KAT6B
RASGRP2
PCNA
CDS2
ICAM1
ZNF746
UPF3A
C16orf54
NR2C2
ZNF740
CSAD
KANSL3
ARHGAP4
ARHGEF18
MRPS31
CCNDBP1
SERPINB1
NDUFA4
PPCDC
RARG
SMG6
NCOA4
KEAP1
AGTRAP
MTG1
SERTAD2
SCAP
ANPEP
CEBPE
SRCAP
LOC730183
HUS1
NR2C1
LPCAT3
USP37
CNOT9
GDPGP1
CIB1
TXNDC11
CASP9
MDM2
DZIP3
CIP2A
MAP3K8
PARP2
PICALM
DENND6A
MBD6
DNAJB2
EMP3
SREBF1
COX5A
MRPL4
CTCF
ANKRD18B
ZNF217
PLIN2
TRPM2
MTRF1L
YARS1
S100PBP
TMEM182
MFSD9
MPC1
RASSF2
SOD2
WTAP
CXCR4
SEC14L1
SLC35C1
ARL4A
MCRIP1
PPP3CB
MED9
MACROH2A1
RAB3D
MAP1LC3B2
KAZALD1
ING1
SEPTIN2
HDLBP
CD38
IPPK
STX18
ADAM17
CDKN2D
KMT5A
BHLHE40
ACACA
MFN2
NAMPT
MAP2K3
NCOA2
EPM2A
RPS6KA1
GFOD1
NIBAN3
RARB
NOL4L
CALR
MTHFR
CLCN6
FAR2
BAZ1B
SH2B3
NUTF2
CENPT
RAP1GAP2
CNOT2
SLC25A19
CYB5R4
GPATCH8
IDH1
HPCAL1
SPATA1
PRELID3B
GNG5
SH2B1
RNF149
PDSS2
CDKN2AIP
MAPK8
LYL1
MYADM
BOLA3
ICAM3
RBM7
C11orf71
RMND5A
SH3BP2
PIK3AP1
NEURL2
CTSA
ANXA11
JUND
DNAJB1
WT1
RNF168
NRL
DCAF11
BIN2
MYO18A
UBE2R2
NKG7
KRAS
SLC11A2
TAGLN2
TCTEX1D4
BTBD19
RNASEH1
GPR108
PA2G4
PHF19
TBL1XR1
UPP1
CTBP2
SDE2
VPS37C
SMARCD2
ADIPOR2
AP1B1
DDX5
SLC4A2
ICAM4
CDK5
MINDY2
SPIN1
AZIN1
BAG2
LMBRD1
LOC114841035
FKBP2
CCDC102A
ZCCHC24
PGLS
NOTCH2NLA
FIGNL1
PDCD4
CENPH
KLLN
PTEN
BCAP29
SLC20A1
LIPA
POM121
MRPL2
KLC4
AARS2
CYP4V2
ZC3H6
ZSWIM9
LIG1
FAM200B
GSPT1
IQUB
QPRT
ROM1
EML3
ARSG
SPHK2
RPL18
BCAT1
ZNF114
STING1
LMBR1
AP2S1
PXYLP1
TRAK2
STRADB
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
PES1
SKP1
IRGQ
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
SART3
IQCG
DPH6
VARS1
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PTGES2
PIN4
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
PDE12
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
SP2
PMAIP1
C16orf91
HOXA4
RPN1
NDUFS7
GTF3C4
DDX31
GORAB
NEUROG1
ATOH1
CNPY2
RARA
DHRS3
BNIP3
ZNF383
BBS9
IGFBP2
MRPL38
GLT8D1
TTI2
PDHX
APIP
WDR74
PCBD2
HOXA2
DNM2
TPRA1
ID2
ANKLE2
P4HB
TEPSIN
NDUFAF8
ALKBH5
RPS10-NUDT3
RPS10
NPAS4
AXDND1
TBX2
CLGN
RAB5B
ZFHX3
DONSON
DOLPP1
CAMTA1
HSPA1B
CBFA2T2
PDHB
SP5
ATF6
TLE4
ANK2
OTUD7B
RBPJ
KATNB1
PANK2
CCDC174
FRA10AC1
ZNF687
PGK1
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
GATA4
FOXP1
SRSF11
DPP9
TBX3
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
KIF21B
LRRC40
ARRDC4
ST18
PDE4D
NFKBIA
SPCS1
TLE2
HOXA3
IQSEC3
POLDIP3
TNFRSF19
SP1
NR2F1
ZNF608
OSBP
ZFHX4
MRPL34
INSM1
STIP1
RNF207
ATP5F1B
SLC45A4
CBX3
RUNX1T1
CS
GPCPD1
HNRNPD
MALRD1
CRLS1
EVI5L
GRSF1
NELFA
EIF2AK3
MTF2
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
POLG
PKN2
KNL1
HEXIM2
DAGLB
SHF
MLEC
MYRIP
ANKRD28
FBXO31
CCDC43
SACM1L
KDM3A
PRMT5
RBBP7
EIF3D
SLC30A4
DIABLO
NLK
RAB37
ZNF503
RHBDD1
RTN4
SERPINE1
CBX5
CEP41
HNMT
HMGB1
NKD1
TMEM101
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
G3BP1
EFEMP2
EIF4H
USP42
ARID4A
DUSP9
KIAA0319
ILF2
PNKD
TDRKH
HTR5A
AIFM2
TRIB1
ID1
HIBADH
ZNF76
LUC7L2
PRKACA
MBD2
KMT2A
ROGDI
NRSN2
BFSP1
TOP2A
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
NEDD9
PRDM10
USPL1
IRF9
PIKFYVE
FAM107B
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
LRCH4
FBXO24
EIF1B
HES3
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
LCK
ACYP1
CHD8
HNRNPA2B1
MAF1
ADM
CMSS1
EXOSC4
YTHDF2
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
LBX2
FAAP24
CEP89
POLR3E
PCTP
PARK7
SEPTIN9
PRDM12
PCGF1
TCHP
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
DUSP12
UBE2C
IRS1
CALM2
GBA
BRWD1
HNRNPC
TANK
MEPCE
TRAF4
ATP23
MPV17L2
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
LPIN1
ZNF148
DDX1
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
PRR14
ZCWPW1
HOXC5
LRRC59
CCDC107
POLR2J3
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
TCF4
SERPINB9
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
CMTR1
NKIRAS1
C8orf37
GLRX5
NFE2
ZBTB18
ARHGAP24
STAT3
FILIP1L
KHSRP
NAT8
WBP1L
JUP
FAM227B
DTWD1
STARD4
NRSN1
LIN28A
ACVR1
GATD3B
GATD3A
CIC
ETV4
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LNPEP
RAB11A
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
ARHGEF1
SKIV2L
NELFE
DYNLT1
CD24
PSMD9
HPD
HINT2
TOMM40
SIRT4
MEF2C
USP3
ACTL6A
TMEM9
IL6ST
TLN1
CREB3
L1CAM
CPVL
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
RPS24
REC8
GLRA1
HMGN4
CLTC
LZTFL1
TMEM86A
SLCO4C1
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
PLEKHA6
AP3M2
CNPY3
PGP
CLDN2
ELF1
LDLR
MAP11
CHN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
CYP1A1
KAT6A
ZBTB45
E2F3
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TBC1D8
FAM162A
CCDC58
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
MAN2C1
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
MAD2L1BP
WBP4
NME1-NME2
NME1
DGKZ
WNT10B
PTP4A2
TOM1L2
DRC3
SLC35E2A
EIF4A3
CLIC4
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FGFRL1
FAM110A
TMEM217
TBC1D22B
C12orf65
LFNG
FGR
MED23
RPS8
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
BCAR3
SLC25A25
H4C3
TMX2
MED19
PEX2
KLF17
TRIAP1
FLAD1
ZDHHC4
MIA2
FGA
OTX1
MRPS23
SERPINB6
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
DDX3X
CLK2
VANGL2
TOB2
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
BNIP2
DUS1L
C6orf89
KATNA1
UBL7
TOP1MT
PLEKHA7
PHF8
RCL1
PPP1R13B
THUMPD3
PMPCB
SLC25A6
NFE2L2
C6orf136
IL27
SLC33A1
ZNF341
BDH1
MLLT11
CDC42SE1
TBCCD1
MGST2
ASB1
SLC25A45
HAL
SHFL
TRAF2
RECQL
GOLT1B
STK11
MCU
DENND2D
TEDC1
BZW2
TIMM44
LEMD2
UGP2
HERC5
NREP
KBTBD2
TRABD
SAXO2
FNTA
EFL1
CTNNB1
RXRA
PPIB
AHCY
PACSIN2
IST1
CIPC
PHPT1
RBM25
MVK
R3HCC1
ATF3
FDFT1
ZNF414
COQ10A
LRRC45
CENPX
UROD