ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607666 | NTERA-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◣ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZGPAT
ARFRP1
TRABD
OTP
KIF21B
PRSS47
LFNG
CYP1A1
KCNJ4
GALP
EXOC2
SH3D21
GJB6
BIRC7
PLEKHA6
ZNF746
TCTEX1D4
BTBD19
GLI1
CCDC120
ADGRA2
CATSPER4
TYROBP
SH3BP4
METTL11B
BHLHA15
SERPINB9
KMT5C
WFIKKN1
SKIL
GABRB2
KCNQ4
TTYH3
DNAJB5
MDM2
CPLX1
FBXO41
HTR6
TPRA1
TLX2
COX5A
SH2B1
UNKL
PLPP2
SERPINB6
CCDC12
KCNF1
ADAMTS2
EXTL1
LZTFL1
PRELID3B
APOBEC3G
NEURL2
CTSA
BRI3
PDE12
DIPK1B
YPEL3
APOBEC3D
MEGF8
USP3
CASD1
RUNX1T1
SERPINE1
PANK2
SLC26A11
GPR108
MAP11
FXYD3
ATP2B2
ATP6V0A4
STEAP3
PLCB2
RNF208
AKIRIN1
CRIP2
C15orf39
SEMA4G
TRAPPC3
MAP7D1
TCF7
ANKRD33
ARHGEF16
GATD3B
GATD3A
MBD2
TP53I3
ADAMTSL4
ITFG2
CORO6
GALNT9
RPS8
DMPK
CYB5R2
UCKL1
MTRNR2L8
MINDY2
LMF1
SOX8
ADGRA1
SPACA6
SOX5
HAPLN3
CHCHD10
CNOT2
RARB
RBKS
BABAM2
PRTG
GPR162
PCTP
GUCA2A
AP1B1
SKIDA1
CFAP20DC
DUSP23
ZFHX3
NR2C1
WBP1L
DONSON
HECTD4
SLC15A3
MCF2L
NRSN2
CPA1
SULF2
SNX12
LHCGR
ZNF615
HUS1
AGAP2
APC2
TP53INP1
ANHX
MDK
MEGF9
CST6
SF3A3
SVOPL
CLDN2
DUSP4
NR2C2
NPM2
YIF1B
HPN
SLC39A14
ACP4
BRD2
TSPAN18
C17orf113
CEBPE
UROC1
PRAM1
MTRNR2L2
POLD1
LOXL1
HMX3
RPRM
SOCS2
CLEC4C
C16orf70
AP5B1
PTGES3
CEND1
KANSL3
STX18
ANKRD28
FAM120B
TEX264
ARHGEF3
FAM110D
SHH
ZNF512B
UTS2R
APOA5
DUS1L
COQ10A
DMAP1
LHX2
TTC7B
TTLL10
RARA
KIAA1522
SMIM5
CYSRT1
LOC105372440
CDCA7L
MSI1
UPF3A
TMEM132B
IL17RD
FOXP1
SRCAP
LOC730183
SLC51B
SBNO2
ZNF346
GPSM1
NUF2
XKR7
SZT2
MED8
PCGF3
SLC4A2
CDK5
GARS1
BIRC6
RBPMS2
CYBA
CDC25B
LPCAT3
KIF13B
S100A16
MACROH2A2
RASSF7
LMNTD2
INTS10
MPP2
BRICD5
FAM3B
CTSZ
CLIP1
NAALAD2
NINJ2
SIPA1
PDE4C
HHIPL1
CCDC85C
ENO2
ISCA1
HINT2
MAN2C1
MCPH1
SERPING1
SERTAD2
SERPINA10
AIFM2
THEM4
CHKB
TNC
CORO7-PAM16
CORO7
CNR1
ENTPD8
PDE2A
FOXJ3
GBA
TSPAN14
SEMA6D
ZNF385A
SLC30A4
PCCA
FAM169A
TMEM240
NBPF15
CHD4
RSBN1L
SMG6
PUS1
CYP11A1
STK11
HNRNPD
PELATON
ANXA9
THPO
RFX1
SLC11A2
BOLA3
OBSCN
ICAM1
CA14
STRA6
NACC1
KCNH2
SAG
PHLDA3
KAT6A
XKR8
TTLL8
CCAR2
SFXN4
GP1BB
BFSP1
PTP4A2
DAB2IP
KCNB1
TSGA10IP
HOMER3
ZNF202
SCARA3
PLIN2
TAF6L
SIK3
TRPM1
SIAH1
NIPSNAP2
RIPOR1
CFAP74
SRSF10
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
PES1
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
SART3
IQCG
DPH6
VARS1
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PTGES2
PIN4
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
FLOT1
SP2
PMAIP1
C16orf91
HOXA4
RPN1
NDUFS7
GTF3C4
DDX31
GORAB
NEUROG1
ATOH1
CNPY2
DHRS3
KAT6B
BNIP3
ZNF383
BBS9
IGFBP2
MRPL38
GLT8D1
TTI2
PDHX
APIP
WDR74
PCBD2
HOXA2
DNM2
ID2
ANKLE2
P4HB
TEPSIN
NDUFAF8
ALKBH5
RPS10-NUDT3
RPS10
NPAS4
AXDND1
CCNDBP1
TBX2
CLGN
RAB5B
DOLPP1
CAMTA1
HSPA1B
CBFA2T2
PDHB
SP5
ATF6
TLE4
ANK2
OTUD7B
RBPJ
KATNB1
CCDC174
FRA10AC1
ZNF687
PGK1
SMARCD2
PRUNE2
DUSP6
MTMR4
QPRT
GATA4
NRL
SRSF11
DPP9
TBX3
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
LRRC40
ARRDC4
ST18
PDE4D
NFKBIA
ARSG
SPCS1
TLE2
HOXA3
IQSEC3
POLDIP3
TNFRSF19
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
MRPL34
INSM1
STIP1
RNF207
SOD2
ATP5F1B
SLC45A4
CBX3
KMT5A
KAZALD1
CS
MACROH2A1
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
NELFA
EIF2AK3
MTF2
PPP6R3
GADD45G
TMEM70
KCNAB2
POLG
PKN2
KNL1
HEXIM2
DAGLB
SHF
MLEC
MYRIP
FBXO31
CCDC43
SACM1L
KDM3A
PRMT5
RBBP7
EIF3D
DIABLO
SREBF1
NLK
RAB37
ZNF503
RHBDD1
RTN4
CBX5
CEP41
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
NCOA2
G3BP1
EFEMP2
CDS2
EIF4H
USP42
ARID4A
DUSP9
KIAA0319
ILF2
PNKD
TXNDC11
TDRKH
HTR5A
TRIB1
ID1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
KMT2A
ROGDI
TOP2A
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
PRDM10
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
ACYP1
CHD8
HNRNPA2B1
MAF1
SCAP
ADM
CMSS1
GFOD1
EPM2A
EXOSC4
YTHDF2
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
PARK7
SEPTIN9
PRDM12
PCGF1
TCHP
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
DUSP12
UBE2C
GPATCH8
IRS1
CALM2
BRWD1
HNRNPC
TANK
MEPCE
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
LPIN1
ZNF148
DDX1
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
ZCWPW1
HOXC5
LRRC59
CCDC107
DNAJB1
POLR2J3
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
TCF4
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
CMTR1
NKIRAS1
C8orf37
GLRX5
NFE2
ZBTB18
ARHGAP24
STAT3
FILIP1L
KHSRP
NAT8
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
LIN28A
ACVR1
CIC
ETV4
MYADM
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
PXMP4
MFSD6
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
ARHGEF1
SKIV2L
NELFE
DYNLT1
CD24
PSMD9
HPD
TOMM40
SIRT4
MEF2C
ACTL6A
TMEM9
IL6ST
SPIN1
TLN1
CREB3
L1CAM
CPVL
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
GFRA3
RPS24
CALR
REC8
PARP2
GLRA1
HMGN4
CLTC
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
AP3M2
CNPY3
PGP
C16orf54
ELF1
LDLR
RPS6KA1
MFN2
CHN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
TXNRD1
DIAPH1
YIF1A
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
RNASEH1
ZBTB45
E2F3
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TBC1D8
FAM162A
CCDC58
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
MAD2L1BP
PIK3AP1
DZIP3
CIP2A
MTHFR
WBP4
NME1-NME2
NME1
DGKZ
WNT10B
CD38
TOM1L2
DRC3
SLC35E2A
EIF4A3
CLIC4
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FGFRL1
FAM110A
TMEM217
TBC1D22B
C12orf65
IDH1