ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584306 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◣ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2A
PSMD1
NME6
RABL2B
MAPKAPK5
SUDS3
RWDD1
CACTIN
POLR3F
DZANK1
DYNC1LI2
VDAC2
NUP85
IPO13
NUP205
HSPA9
VTI1B
PSMG2
CEP76
GOSR2
RPL21
NVL
POLR2E
SEC61B
ALG2
ATP5MG
C19orf48
NEUROG2
EFTUD2
CCDC103
TBCK
AIMP1
FARSB
ACTR10
EXOSC5
BCKDHA
MRPS7
GGA3
STAM2
HADHB
HADHA
IRGQ
ZNF576
PNO1
REXO1
PAK1IP1
C6orf52
SKP1
DCTN1
BLCAP
STAM
SRD5A1
PES1
CAPRIN1
TSNAX
LYRM4
FARS2
NCLN
TSN
ISCU
SART3
SUPV3L1
UPF2
ANAPC7
RPS23
ATP6AP1L
COX7A2L
IGFBP2
ZRANB2
SF3B3
COG4
VEZT
FGD6
PCBP1
NEUROG3
XPNPEP3
ST13
IQCG
RPL35A
VARS1
TTC8
GOLGA5
RPS27A
CLHC1
NDUFA4
SLC35B1
RABGGTB
DPH6
PDAP1
BUD31
PI4KB
ADK
AP3M1
RPS12
SMC2
EIF4ENIF1
RBBP5
PSMD12
UFM1
TMED1
HES1
SELENOF
HS2ST1
MRPS5
MALRD1
ICE1
C17orf80
FAM104A
USP1
RBKS
BABAM2
UBE2I
OSGEP
APEX1
INSM1
BNIP3
DDX39B
ATOH1
PAF1
TM9SF1
PROSER1
NHLRC3
PRDM12
C16orf91
PTGES2
PIN4
HOXA4
BAG6
RPS29
LRR1
TAF9
RAD17
AK6
NDUFA10
BICRA
ANK2
BFSP1
TLE4
RBBP7
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
SUCLG1
RAI14
KIF26A
COMMD1
CCT4
SLC7A5
PMAIP1
EIF2S3
TPRA1
PDHB
HOXB4
GTF3C4
DDX31
RGS12
GADD45GIP1
STK36
RNF25
CNPY2
SPACA1
RPL7
RDH10
SEC11C
DDX3X
PCBD2
CAMTA1
ANKLE2
DSCAML1
CLDN2
GFRA3
HES3
RPN1
ZNF383
SLC10A2
HOXD3
SKIL
ID1
PDZRN3
NEUROG1
CEP41
PRUNE2
KIF21B
PDHX
APIP
OAZ3
MRPL9
PAX3
HES5
GTF3A
LPIN1
CDC73
VOPP1
PDPN
CPSF4L
ZFHX4
CLEC18C
ALKBH5
KLF17
PLEKHA5
GFER
LRIG3
TNC
NEDD9
GORAB
CLGN
DHX32
METTL11B
PNKD
TBC1D8
OR8J1
GADD45G
GFRA1
LIN28B
UPF3A
ARHGEF28
OTX1
BRWD1
CBX3
AXDND1
TIGD1
EIF4E2
ZGPAT
ARFRP1
HSPA1B
RPS10-NUDT3
RPS10
JAKMIP1
HOXC5
TMPPE
GLB1
LIX1
MEIS3
PPP2R5A
ST18
PDE12
HOXA3
ZBTB25
ZBTB1
ZNF746
KAZALD1
POLR3A
MEF2C
MYRIP
EIF4E3
ZNF608
DHRS3
TRIM71
ATOH8
TAGLN3
TLE2
ZNF341
NNMT
NR2F1
PHOX2B
RARA
TCF4
CEMP1
RAN
MUSTN1
CS
FRRS1L
KMT2A
HNRNPA2B1
ZFHX3
CER1
FABP5
FHL1
RYBP
WBP1L
TRAP1
SLC39A6
CPLX1
MTMR7
NELFA
HNRNPD
MRPL38
MEPCE
ZCWPW1
RCOR3
LIN28A
AJUBA
GLT8D1
SPCS1
SYTL2
LDLRAD3
KEAP1
REC8
FAM124A
PAX7
ARHGAP24
BMPR1B
STOML2
HOXA2
COX5A
POU2F1
TFDP2
DNMT3B
ITPRIP
CHD8
CLEC18B
EIF4H
KDM1A
CATSPERB
HOXC6
FGFR4
TPO
CNN3
SRSF11
LRRC40
TMEM70
FOXO3
TRDMT1
PLEKHA6
ADM
CPVL
CHN2
RCOR1
TBL1XR1
SP8
DGKZ
RBPJ
DICER1
CCDC169-SOHLH2
CCDC169
MECOM
QPRT
IPO11
ACOT6
PEX2
CIAO2A
CCDC198
TRIM2
CCDC107
TRAF3IP2
HEY1
SH2B1
UROD
HECTD3
GIGYF1
ABAT
HSD17B8
ALPK3
BBS9
ATP5MC2
LRRC8C
SOX11
PKDCC
ZNF853
SERPING1
KMT2B
ARHGEF1
PANK2
DUSP6
NKIRAS1
NR1D2
PIPOX
BCO1
DRAP1
C11orf68
CCDC43
USP17L22
USP17L20
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXB3
SPOCK2
MSI2
TCHP
RARB
CDX1
RFFL
VXN
ADAMTS10
CALHM6
P2RX6
FGFRL1
ELMO1
PTCH2
DTNB
SPTBN1
MTF2
SOX6
PAX6
SYBU
NEDD4L
ZNF593
C1orf232
WRAP53
ZNF891
ZNF10
COL5A2
PRM3
IDUA
KAT6B
ACCS
TPST1
AGPAT4
ROBO3
CENPBD1
IKZF4
GCK
ELOVL6
NCALD
FAM181A
NCOA2
KRT9
NEO1
RPS24
H3-3A
EFNB1
CCN2
PPP1R3D
FAM217B
IRS2
LMX1A
DUSP2
CETN1
G0S2
CSTF2T
FERD3L
LPAR3
ACVR1
MAD2L2
ASIP
DRAXIN
NPAS4
CSNK1A1
H3C12
MGST1
KAZN
DLC1
CASC3
RPS7
SOX12
FGD4
PTPRZ1
TXNIP
POLR1D
LNX2
KDM3A
RBMS3
BRI3
ZFAND4
CMTR1
CEP63
ANAPC13
RXYLT1
PRTG
ELAPOR2
DENND1A
NCAM1
KLB
RIN2
NDUFS7
SPIN1
PCDH18
DYRK1B
C12orf42
CDIP1
SELENOP
LZTFL1
SP5
KCNJ13
RBM25
VANGL2
HES4
PAH
ASCL1
NUP93
HABP4
TTI2
USP17L15
DLX4
ETV1
ZNF587
DGAT2
SASH1
WDR74
HOXB5
CELSR3
KDM4C
SPHK2
RPL18
MPZL2
RIMBP2
DLG2
PHACTR2
DONSON
AKIRIN1
YAP1
MFSD3
TBPL1
GAS7
GRWD1
SGK3
WDR47
PEX14
GPRC6A
NFIX
POLR2J3
RAPGEF4
FOXP1
CXCL6
RSRC1
FAM162A
CCDC58
RNF138
PLXNB1
CBX5
SECISBP2L
HMX3
GATD3B
GATD3A
GUK1
AKR1C2
CCNO
NAALAD2
ZNF423
LIMCH1
ZSWIM2
KAT6A
LMNA
MEX3A
LTV1
TAS2R7
NDUFB3
FAM126B
NAT10
GAS2L3
CCNDBP1
SLC25A6
SEMA4B
PODXL
ZGRF1
LARP7
PRSS47
UBR5
C15orf61
TMEM114
MYH3
SOX5
STRA6
KRTAP3-1
CLASP2
ANKRD6
NEBL
WFIKKN1
MTRNR2L8
MTRNR2L2
SPATC1L
FLOT1
SP2
GPR108
NEURL2
CTSA
DNM2
ID2
P4HB
TEPSIN
NDUFAF8
MINDY2
TBX2
RAB5B
KANSL3
STX18
DOLPP1
CBFA2T2
ATF6
OTUD7B
KATNB1
CCDC174
FRA10AC1
ZNF687
PGK1
HUS1
SMARCD2
RFX1
XKR7
MTMR4
GATA4
NRL
DPP9
TBX3
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
ARRDC4
PDE4D
NFKBIA
ARSG
IQSEC3
POLDIP3
TNFRSF19
RMND5A
DCAF11
SP1
RARG
PCNA
OSBP
PPCDC
MRPL34
STIP1
RNF207
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
RUNX1T1
MACROH2A1
GPCPD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
PPP6R3
KCNAB2
POLG
PKN2
KNL1
HEXIM2
DAGLB
SHF
MLEC
ANKRD28
FBXO31
SACM1L
SMG6
PRMT5
EIF3D
SLC30A4
DIABLO
SREBF1
NLK
RAB37
ZNF503
RHBDD1
RTN4
SERPINE1
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
ARHGEF10L
G3BP1
EFEMP2
CDS2
USP42
ARID4A
DUSP9
KIAA0319
ILF2
TXNDC11
TDRKH
HTR5A
AIFM2
TRIB1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
MBD2
ROGDI
NRSN2
NR2C1
TOP2A
TCTEX1D4
BTBD19
HMGCS1
IQGAP2
RNF149
PRDM10
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
ACYP1
MAF1
SCAP
CMSS1
GFOD1
EPM2A
EXOSC4
YTHDF2
STX16
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
SEPTIN9
PCGF1
ANP32E
DCAF7
MPND
ADAP1
HSP90B1
ZC2HC1C
LTBR
DUSP12
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
CALM2
GBA
HNRNPC
TANK
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
ZNF148
DDX1
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
LRRC59
DNAJB1
TMEM94
KIAA0319L
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
CSRNP1
C8orf37
GLRX5
NFE2
ZBTB18
STAT3
FILIP1L
KHSRP
NAT8
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
CIC
ETV4
MYADM
NBPF1
MSMO1
ATXN1L
NCOA7
FBXO41
CCNL1
CCPG1
C15orf65
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
SKIV2L
NELFE
DYNLT1
CD24
PSMD9
HPD
HINT2
TOMM40
SIRT4
USP3
ACTL6A
TMEM9
IL6ST
TLN1
CREB3
L1CAM
PSMD3
MANF
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
CALR
PARP2
GLRA1
HMGN4
CLTC
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
AP3M2
CNPY3
PGP
C16orf54
ELF1
LDLR
RPS6KA1
MAP11
MFN2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
ZBTB45
E2F3
SERTAD2
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TMCO6
ADGRG3
GATAD2A
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
MAN2C1
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1