ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17639399 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◣ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZGPAT
ARFRP1
FLOT1
SKIL
LAPTM5
KAT6B
SMIM20
MTRNR2L8
RBKS
BABAM2
C16orf54
RARG
NR2C1
ICAM1
UPF3A
KANSL3
SMG6
NOL4L
ZNF746
PPCDC
MTRNR2L2
CEBPE
SRCAP
LOC730183
CCNDBP1
SEPTIN2
HDLBP
NR2C2
PCNA
CDS2
ARHGAP4
NDUFA4
ZNF217
ARHGEF18
TXNDC11
CXCR4
RASGRP2
ACACA
ZNF740
CSAD
MFAP4
MTG1
PKN1
KAZALD1
ANPEP
NCOA4
SH2B1
ADAM17
ARIH2
GPATCH8
SERPINB1
LCOR
ANKRD18B
MYADM
TRPM2
BIN2
PICALM
EPM2A
COX5A
NCOA2
ANKRD10
ADGRG5
EIF4A3
WNT10B
ZNF584
HPCAL1
EMP3
MRPL4
TMEM182
MFSD9
CTBP2
TPRA1
MED9
SH2B3
YARS1
S100PBP
PLIN2
INAFM2
PGLS
NUTF2
CENPT
SH3BP2
NANP
GDPGP1
CIB1
ARL4A
AGTRAP
MRPS31
CD38
OTUD7B
NAMPT
COX20
CCDC174
MFSD11
SRSF2
P2RY2
NEURL2
CTSA
DNAJB1
E2F3
LYL1
CDKN2D
KEAP1
IDH1
CTBP1
KMT5A
PRELID3B
PXYLP1
JUND
PIK3AP1
FASTKD1
HBP1
MFN2
REPIN1
RFX3
PIM3
EEF1A1
ZCCHC24
ING1
MACROH2A1
GFOD1
NRDE2
MMP9
PDCD4
CTTN
TAGLN2
SCAP
PHF19
STK17A
NKG7
CEP41
CPSF4L
ICAM3
SREBF1
PLEK
SLC25A6
LRMDA
TBL1XR1
NIBAN3
OCEL1
CTCF
DHRS3
SOD2
WTAP
MBD6
SLC12A6
TRAPPC10
DZIP3
CIP2A
LSM8
BOLA3
DIPK1A
KRI1
MAPK8
USP49
MRPL34
SYK
PARP2
CASP9
EGLN1
RAB3D
DBP
RAB11FIP2
RHOG
RNF149
LST1
ARSG
BAZ1B
POLD2
MAP3K8
SRXN1
ICAM4
GPCPD1
WDR12
CARF
DENND4B
DNAJB2
LOC388282
ESRRA
RARB
BAIAP2
RREB1
PKN2
RBM7
C11orf71
VPS37C
MAP1LC3B2
UCP2
PPP1R12C
UBE2R2
ATXN2
TRERF1
ANTXR2
C15orf62
COMTD1
ROM1
EML3
RAB37
MAP2K3
PACC1
KRAS
GATD3B
GATD3A
HESX1
CBFA2T3
TRAM1
APPL1
NCF1
NDUFA10
RAB11FIP1
EVPLL
HINT2
HUS1
RASSF2
TSKU
TAF1A
SLC25A35
BPI
ASB1
NRL
DCAF11
ZBTB45
AFF1
AZIN1
PIK3R1
USP37
CNOT9
STX18
FBXO31
MAP1LC3B
IPPK
PTTG1IP
PCTP
LFNG
SYPL1
RFC5
AXL
M6PR
KLRG1
SLC3A2
PRXL2B
HHEX
REL
MCRIP1
TSPAN32
C11orf21
AFG1L
CCDC102A
NOTCH1
AKAP10
CHI3L1
CPQ
MPRIP
BLOC1S5
AP1B1
PHC2
CBX3
HNRNPA2B1
SPNS3
TCTEX1D4
BTBD19
PPP3CB
DENND2D
PDSS2
STING1
BHLHE40
UPP1
ZNF438
UMODL1
CALR
SLX1B
SLX1A
BOLA2B
BOLA2
SPATA1
GNG5
SECISBP2
CCDC9
DARS1
SP1
TM7SF3
RIN1
KLF3
SPIN1
BAG2
ZNF446
RBPJ
RASSF4
ATP11A
NIPSNAP2
CNOT2
SOCS5
PEX14
BOLA2-SMG1P6
C5AR2
XPNPEP1
NME6
AP2S1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
PES1
SKP1
IRGQ
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
SART3
IQCG
DPH6
VARS1
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PTGES2
PIN4
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
PDE12
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
SP2
PMAIP1
C16orf91
HOXA4
RPN1
NDUFS7
GTF3C4
DDX31
GORAB
NEUROG1
ATOH1
CNPY2
RARA
BNIP3
ZNF383
BBS9
GPR108
IGFBP2
MRPL38
GLT8D1
TTI2
PDHX
APIP
WDR74
PCBD2
HOXA2
DNM2
ID2
ANKLE2
P4HB
TEPSIN
NDUFAF8
MINDY2
ALKBH5
RPS10-NUDT3
RPS10
NPAS4
AXDND1
TBX2
CLGN
RAB5B
ZFHX3
DONSON
DOLPP1
CAMTA1
HSPA1B
CBFA2T2
PDHB
SP5
ATF6
TLE4
ANK2
KATNB1
PANK2
FRA10AC1
ZNF687
PGK1
SMARCD2
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
QPRT
GATA4
FOXP1
SRSF11
DPP9
TBX3
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
KIF21B
LRRC40
ARRDC4
ST18
PDE4D
NFKBIA
SPCS1
TLE2
HOXA3
IQSEC3
POLDIP3
TNFRSF19
RMND5A
NR2F1
ZNF608
OSBP
ZFHX4
INSM1
STIP1
RNF207
ATP5F1B
SLC45A4
MDM2
LPCAT3
RUNX1T1
CS
HNRNPD
MALRD1
CRLS1
EVI5L
GRSF1
NELFA
EIF2AK3
MTF2
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
POLG
KNL1
HEXIM2
DAGLB
SHF
MLEC
MYRIP
ANKRD28
CCDC43
SACM1L
KDM3A
PRMT5
RBBP7
EIF3D
SLC30A4
DIABLO
NLK
ZNF503
RHBDD1
RTN4
SERPINE1
CBX5
HNMT
HMGB1
NKD1
TMEM101
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
G3BP1
EFEMP2
EIF4H
USP42
ARID4A
DUSP9
KIAA0319
ILF2
PNKD
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
HIBADH
ZNF76
LUC7L2
PRKACA
MBD2
KMT2A
ROGDI
NRSN2
BFSP1
TOP2A
TIGD1
EIF4E2
HMGCS1
IQGAP2
NEDD9
PRDM10
USPL1
IRF9
PIKFYVE
FAM107B
GOT1
TBL1X
TMEM60
PHTF2
LRCH4
FBXO24
EIF1B
HES3
CCDC88A
TUBGCP3
ANKS4B
B4GAT1
CYB5R4
LCK
ACYP1
CHD8
MAF1
ADM
CMSS1
EXOSC4
YTHDF2
STX16
CASC3
TSPAN4
TUBB4B
LBX2
FAAP24
CEP89
POLR3E
PARK7
SEPTIN9
PRDM12
PCGF1
TCHP
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
DUSP12
UBE2C
IRS1
CALM2
GBA
BRWD1
HNRNPC
TANK
MEPCE
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
LPIN1
ZNF148
DDX1
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
PRR14
ZCWPW1
HOXC5
LRRC59
CCDC107
POLR2J3
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
TCF4
SERPINB9
TCERG1
GGT1
KPNB1
FMC1-LUC7L2
FMC1
CSRNP1
CMTR1
NKIRAS1
C8orf37
GLRX5
NFE2
ZBTB18
ARHGAP24
STAT3
FILIP1L
KHSRP
NAT8
WBP1L
JUP
FAM227B
DTWD1
STARD4
NRSN1
LIN28A
ACVR1
CIC
ETV4
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LNPEP
RAB11A
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
KAT7
ZNF219
ARHGEF1
SKIV2L
NELFE
DYNLT1
CD24
PSMD9
HPD
TOMM40
SIRT4
MEF2C
USP3
ACTL6A
TMEM9
IL6ST
TLN1
CREB3
L1CAM
CPVL
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
RPS24
REC8
GLRA1
HMGN4
CLTC
LZTFL1
TMEM86A
SLCO4C1
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
PLEKHA6
AP3M2
CNPY3
PGP
CLDN2
ELF1
LDLR
RPS6KA1
MAP11
CHN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
UBAP2
NBN
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
KAT6A
SERTAD2
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TBC1D8
FAM162A
CCDC58
TMCO6
ADGRG3
GATAD2A
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
MAN2C1
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
MAD2L1BP
MTHFR
WBP4
NME1-NME2
NME1
DGKZ
PTP4A2
TOM1L2
DRC3
SLC35E2A
CLIC4
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FGFRL1
FAM110A
TMEM217
TBC1D22B
C12orf65
FGR
MED23
RPS8
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
BCAR3
SLC25A25
H4C3
TMX2
MED19
PEX2
KLF17
TRIAP1
FLAD1
ZDHHC4
MIA2
FGA
OTX1
MRPS23
SERPINB6
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
DDX3X
CLK2
VANGL2
TOB2
ZC3H6
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
BNIP2
DUS1L
C6orf89
KATNA1
UBL7
TOP1MT
PLEKHA7
PHF8
RCL1