ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671314 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◣ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
MTRNR2L2
POLR3E
SHF
B4GAT1
PPP6R3
KNL1
POLG
DPP9
DHRS3
SACM1L
PRMT5
TBL1X
FBXO31
LUC7L2
FMC1-LUC7L2
FMC1
LTA4H
GSTA4
NDUFS7
RAB11A
C8orf37
H4C8
CCDC107
MTRNR2L8
H4C12
ELF1
WBP4
RPS29
ILF2
NCOA7
TIA1
ANG
METTL26
TTI2
SMARCC2
BCAR3
RAD54L2
STAT6
NME1-NME2
NME1
STX16
CSRNP1
SIRT4
FLOT1
NUF2
PPEF1
HMGN4
TMEM242
GTF2H2C_2
GTF2H2
HSPA6
LTBR
SCNN1A
MTF2
OR1F1
NFE2L2
ATXN7L2
POLDIP3
CASC3
EIF2D
DRAP1
C11orf68
YARS1
S100PBP
DDIT4
FRA10AC1
H4C15
H4C14
TSEN15
ZNF839
SERPINE1
TACO1
HES1
FAM227B
DTWD1
MED23
RPL37
MRPL40
HIRA
CCNL1
ZNF827
TMEM259
CCN5
TEFM
SNX18
WDR24
SAR1B
GTF2H2C
LRRC37A3
TRIB3
SMARCD2
SLC44A1
ANP32E
USP30
MED16
RBFOX2
EIF4A3
MRPS35
TNPO1
JUNB
SOD2
WTAP
RUVBL1
EEFSEC
RNF207
C19orf53
UPK2
RNASE4
TRIB1
ATF3
TRIP4
DCP1A
PSMF1
MRPS31
ARID1A
R3HCC1
BAZ2A
POLR3B
WDR36
MRPS15
TSFM
IARS1
OPA1
TMEM41A
SPIDR
TOB2
MAT2A
GPT2
IQSEC3
SNRPE
KANSL3
MRPL21
IGHMBP2
GSTCD
INTS12
DCAF10
ANO10
ABHD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CD8A
TOP3B
ARID5B
GEMIN7
H1-2
CAMK2D
LRRC59
INO80C
GADD45A
PLEKHG2
CALM1
S100A2
MKRN3
C12orf73
C17orf75
H4C4
RGPD8
RGPD5
NUP54
RGPD6
COMMD2
SNAP47
JMJD4
KDM1A
NR1H3
ACP2
GBA
NDUFC2-KCTD14
NDUFC2
C8orf33
EIF3F
PRKCE
JUN
STX18
PXK
CDKN2AIPNL
PHACTR4
LASP1
EPB41L4B
PROSER1
NHLRC3
DDX1
GTF3C3
DMAP1
SH3BP4
ATF1
SPRED2
GRIK4
STAG1
HMGB1
USPL1
GABARAPL1
HTR5A
ARL8B
ZSCAN22
DCLRE1B
AP4B1
TMEM132A
ITGB3BP
EFCAB7
CEBPB
CALM2
PEX3
ADAT2
ZNF212
ATP5MC2
SF3A3
MRPL39
KRT8
EEF2K
DUS1L
DTNA
TAS1R1
NOL9
SUGCT
MPLKIP
PCBD2
AURKAIP1
KLF7
CELSR3
COPS7B
TIMMDC1
TAMM41
FAN1
ADPRS
ANKRD39
RHOT2
INTS1
LSMEM1
TRIM8
ARHGAP24
UQCRH
LRRC41
PPARD
TBC1D19
MTLN
RBBP5
AP3S2
NLE1
PPARG
NABP1
TMEM167B
SMG8
NSUN4
MAF1
STK40
MAML3
VPS72
CCAR2
G6PC3
ANKRD46
ZNF609
ATXN2L
TMEM248
SSBP2
NFKBIA
NSFL1C
ZFP36L1
SIAH1
NSA2
GFM2
MAD1L1
SLC24A1
INTS14
FAM43A
POMZP3
VIRMA
GFER
DUS2
DDX28
CTDSP1
STMP1
H4C11
LAMTOR5
SEC31A
RBM28
ZSCAN25
C18orf21
TGIF1
HINT3
CCDC33
BHLHE40
ZBTB45
SRRM3
EIF4G2
AHR
SLC7A11
SCNN1G
BCOR
C3
H4C3
NLRX1
NBPF1
SLC25A45
ABHD12
FUS
KDM4A
MRPL3
FAM228B
SF3B6
H2BC9
H3C7
ZNFX1
TGFBR3
TUBGCP3
UNK
CDK6
HSP90AB1
PIK3R1
BCAT1
SLC7A5
PGRMC2
KDM3B
SAMD4A
STEAP1
MFSD11
SRSF2
GOT2
LSG1
RWDD3
VPS25
LMO4
RTN4
MRPS23
CDC25C
TAF12
FAM53C
DIP2B
RRP15
ABCG1
TRIAP1
SURF6
MTHFD2
MRO
PSMD3
SLC33A1
SNX17
EIF2B4
MNAT1
ZSCAN12
FTL
ZNF461
MOB4
CLK3
CCND1
TRDMT1
STK17A
PPA2
FRG1
KDM2A
TAF3
SPRYD4
MRPL44
GPN3
FAM216A
LFNG
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
VPS36
H4C2
PSMA1
AAR2
SELENOH
BZW2
AHCY
ANKMY2
RHOF
SSRP1
MTREX
DHX29
VEGFA
SLC25A21
MECOM
CA2
CLUAP1
CRBN
PET117
KAT14
ETS2
GTF2A1
RAD50
ARL6IP1
BRD3OS
ATF6
PDE8A
PTCD1
CPSF4
DDX6
SRRM1
OXTR
HNRNPD
ZDHHC4
MTOR
CITED2
EXOC2
NUFIP2
YBEY
MCM3AP
FUT8
KMT5B
MEF2C
HBP1
AARS2
ARHGEF12
MAZ
TTLL4
HNRNPA1L2
MRPL1
NPAS4
TAB1
TATDN3
NSL1
CSF1
MTERF1
TMEM158
TOB1
MRPL53
MRPS2
C9orf116
SRSF7
ZNF843
TMEM184A
NDUFS4
POMK
AMACR
PAFAH2
THOC5
WIZ
RPS20
BRIX1
B4GALT3
HERC3
PYURF
PIGY
TPRA1
AMOTL2
SMN2
SMN1
SAAL1
MTHFD2L
ZFP91
CXCL2
IFIT3
DACT3
HUS1
RNF216
DGAT1
SLC25A3
KRBA2
TCF7L2
CYCS
SLC35E2A
RSRP1
RPL28
BRF2
PTPN13
H2AX
RXRA
EIF3B
NGLY1
NDUFAB1
OXSM
NUP188
DOLK
FAM98B
RPA3
ARHGAP22
ROR1
PMAIP1
PARP2
SMAD3
MTMR2
COX19
PEX6
SDC4
BTF3
CCDC59
DYNLL1
GBE1
ZC3H10
UGGT1
TRIM52
TM2D1
ATOX1
DUSP1
NKX2-5
IL6ST
PIK3R3
MDP1
HSP90AA1
CABIN1
SRP9
ZBTB9
AFF1
DSTYK
XPC
LSM3
TERF1
C11orf49
TAF4
ZC3H6
N6AMT1
MCOLN1
ALG10B
TM4SF1
ZMPSTE24
ARRDC2
OSMR
MSANTD3
DDX19A
COX7A2
SLC37A4
ALOXE3
ACSF3
NDUFA12
WDR11
AGK
NIPBL
MRPS10
PSMD9
HPD
ASH1L
CXXC4
NOL7
BMF
SMG7
PACSIN2
PCMT1
POLR2C
ARL14EPL
RGS16
SRA1
TUBB4B
UBL7
CTNNB1
H2AC19
H2AC18
LATS1
SLC38A1
BTG1
MTMR6
KAT2A
SRGAP1
GGA1
PPP1R18
TRA2B
DNAJC2
TRAF6
RAG1
TXNIP
EIF4A2
EDC4
ANGEL1
ATG16L1
H2BC11
H2AC11
TCAF2
TIMM44
EIF1AD
BANF1
VRK2
RBM45
ZSCAN9
IPO4
SAMD4B
ADH5
TTC26
LARP1
ZNF721
PIGG
TGOLN2
RPL7A
MED22
JRK
ZNF598
PPP4R3B
SNRPB2
USP42
STAT3
ERRFI1
CIPC
MKRN2
HNRNPAB
INHBE
WASHC2A
INSR
CXCL8
UBA2
HEMK1
DPY19L4
KAT5
TRMU
BIRC3
BBS1
CNOT2
PIKFYVE
PEX14
UGP2
SEC13
ERCC6L2
EIF3G
LPP
XRN2
RRP1B
HSF2BP
FXN
SYT7
FNDC3B
TSR3
GNPTG
FAM50B
GLIPR1L1
PDE12
TES
SOCS2
CCNC
ARMC5
FEM1C
DISC1
LARS2
VWA8
DYM
MCIDAS
BANP
PARL
SUPT3H
YWHAG
MAGOH
MOGS
SNRNP48
SH2B1
NRL
DAGLB
NOTCH2NLC
SLC38A2
HDAC2
PCK2
WDR70
GALK2
COPS2
CALD1
PTPRM
MOK
MAML2
TIGD1
EIF4E2
TANK
TAGLN2
DUSP10
PRPSAP1
ZBED3
MOB3A
IZUMO4
RMDN2
RNF6
GPN1
CCDC121
ZNF391
NRP1
SUMF2
MAP1LC3B2
GPAT3
KMT2D
B3GALT4
COMMD1
CDK5RAP1
ZNF3
FOXJ3
RANBP2
MARCHF6
SEC11A
ADGRL2
DPH7
DNAJC25-GNG10
DNAJC25
MORF4L1
DGCR8
ZNF579
IP6K3
CCDC88A
DIAPH1
HEXB
KIFC1
SLTM
CPSF1
ZFP36L2
SCAMP1
POC1B-GALNT4
MAPRE2
IL20RB
RPL10A
MTIF2
MRPL12
VAMP1
KIF5B
TACC2
RBSN
NDUFAF5
ESF1
SYNRG
PPP1R12A
NRF1
NOL10
ZER1
MAN2C1
NDUFB1
CPSF2
RTEL1
EPC1
NQO1
VPS4A
DUSP6
HES3
PMPCB
PRDM1
SIK2
TRAF7
SETD9
BTN3A2
DEF8
EPHB3
RET
ID2
FOS
SLC25A51
SLC39A1
ZNF460
U2SURP
E4F1
CREB3L4
XPOT
SLC27A4
NSRP1
PKM
ITFG2
BMS1
SSBP1
PSAT1
VWA7
TMEM170A
KLF10
ZFAND2B
CACNB3
FSTL3
CCN1
FSCN1
YIF1A
HMGA1
NOB1
RPL22L1
CHMP1B
SORL1
NAA80
HYAL3
TM4SF4
KIF21A
GUCY1A2
PCDH1
ZDHHC6
VTI1A
SPATC1L
TMEM101
RPL5
PRICKLE4
FRS3
EIF3C
THOC1
H2BU1
H2AW
GTF3C4
DDX31
MLEC
OGFOD2
SMIM12
PLK3
CUL7
COX16
CSTA
STAM2
POLR2J
C12orf57
PSMG3
NUDT4
NARS1
PLD1
USP53
NOXA1
EMSY
QSOX1
DLC1
LNPEP
TXNDC15
MGST1
POLE4
REV3L
H3-3A
ITPR1
CALU
MCCC2
CLIC4
STMN3
TOMM22
GNAI2
TAF10
VAMP4
CCDC80
FAM72C
DBNL
IER3
NFAM1
GOLPH3
RABIF
DENND1B
PYCR2
MYH9
PDZD9
ELMO1
ASNS
NUP107
APP
TIGD6
HMGXB3
RANGAP1
MAP4K5
ATL1
DPH5
ZC3H7B
PRDX2
PTPRE
TMEM222
UCHL5
RO60
GTF3C5
TMEM168
YWHAH
DOCK7
MTBP
MRPL13
BBS7
TRAM1
FBXO4
NOCT
TBC1D13
PINX1
ACBD6
ZNF205
LRCH4
FBXO24
FNTA
SRP68
IL1RAP
RSU1
NFIL3
B4GALT1
CIZ1
TRMT61B
FAM207A
RABGGTA
IVNS1ABP
TBC1D31
DPY30
USP38
FAM118A
RIN2
EGLN3
ANKLE2
ZFHX3
SCAND1
DR1
EIF2B3
C10orf88
RAB18
RTTN
ZNF165
ATP13A3
BNIP1
C5orf34
PDPK1
TCTEX1D4
BTBD19
MST1
ADPGK
SRSF5
NDUFAF1
RAD23A
ATP5MPL
CDC16
PRDX1
GINS4
TENT4A
AP2A2
PDS5B
ATG4C
RBM17
COL12A1
BOD1L1
SKIDA1
DHDDS
TIPARP
WASHC2C
PSME3
SCFD1
SARAF
LPCAT4
HAGH
FAHD1
TMEM267
NR1H2
SREBF1
SERPINB1
POLR2J3
SORBS2
ZFAND3
PBLD
HNRNPH3
CYP20A1
GPBP1
METTL21A
TAF13
NOC3L
ISL2
SMAD4
SEPTIN11
LTBP1
P3H2
HSPE1-MOB4
HSPE1
HSPD1
NCBP2AS2
NCBP2
TLN1
CREB3
DHX8
LIN54
CBWD1
PCID2
CUL4A
PTK6
TVP23B
TNPO3
ALG10
EIF4EBP1
DNAAF2
UQCC3
LBHD1
LPIN3
ZNF577
CCDC85A
TBX3
MEMO1
BCL6
DOHH
ODC1
ING5
HEATR5A
GOSR1
SOD1
MICALL1
DENND4B
GPRC5A
TRIM26
MRPL58
VARS2
SPOP
GPAM
WDFY1
TP53I3
ACBD4
SDHAF3
POFUT1
PLAGL2
GPHN
SMAP2
PTPA
CRAT
IRX2
C5orf38
INMT
FAM107B
WBP1L
PCNX4
METTL9
TGFBR2
ALKBH3
UBE2D3
ZBTB4
POLR2A
RRP8
ILK
PLK2
TMEM179B
NCK1