ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607665 | NTERA-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◣ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZGPAT
ARFRP1
KIF21B
SKIL
GJB6
MINDY2
METTL11B
MDM2
SH2B1
GLI1
CYP1A1
KCNF1
OTP
SERPINB9
WFIKKN1
CPLX1
FBXO41
USP3
HECTD4
TAGLN2
NEURL2
CTSA
PDE12
PCTP
RPS8
C16orf70
KCNQ4
CLDN2
SPACA6
LZTFL1
MAP11
ATP6V0A4
PANK2
TLX2
BIRC7
PLEKHA6
TPRA1
KMT5C
BRI3
RBKS
BABAM2
KCNJ4
ADGRA2
MEGF9
DUSP4
MACROH2A2
TCTEX1D4
BTBD19
CHCHD10
SERPINB6
PRELID3B
ZNF746
TNC
UTS2R
MTF2
TRAPPC3
MAP7D1
GATD3B
GATD3A
RARA
ZFHX3
CCDC120
MDK
HUS1
PRSS47
DIPK1B
LOXL1
SRCAP
LOC730183
APOBEC3G
NDUFS7
WBP1L
WDR81
SOX5
CFAP20DC
TSPAN18
APOBEC3D
GUCA2A
NRSN2
CDC25B
OTUD7B
SERPING1
CNPY1
ADM
SOCS2
CASD1
SH3D21
NR2E1
DONSON
NR2C1
CNR1
NR2C2
ATP6V0C
RUNX1T1
ACYP1
ZC2HC1C
HIGD1A
ENO2
LHCGR
FOXJ3
BFSP1
ITFG2
COX5A
LFNG
SLC11A2
SLC4A2
CDK5
MRM1
CYBA
RMND5A
DEPP1
AP5B1
NAP1L4
CRIP2
DUS1L
GALP
ATP5MC3
SNX12
GBA
DUSP23
UPF3A
TRABD
CDCA7L
AKIRIN1
PCNA
CDS2
PTGES3
HTR6
IL17RD
KAT6B
SH3BP4
GPR162
DHX32
BOLA3
EEA1
YIF1B
GABRB2
TECPR1
SERTAD2
NUF2
LIN28A
KAT6A
CNOT2
PTP4A2
AP1B1
UHRF1BP1L
ADGRA1
TCF7
MTRNR2L2
FAM72D
ACY1
NIPSNAP2
GPCPD1
CCDC92
INTS10
NAALAD2
RNF208
STX18
CORO6
MTRNR2L8
NPAS2
DSTYK
DENND5B
FAM20C
USP30
MSI1
GPRC5A
C15orf39
ZBTB17
CXCL12
ZNF202
TTYH3
CFAP74
ACHE
RBBP5
ZNF385A
LMF1
SOX8
SCAP
FNDC5
FOXP1
NBPF15
CTSZ
DNAJB5
TBC1D9
HHIPL1
CCDC85C
KANSL3
LRMDA
TMEM132B
TOP2B
LPCAT3
SLC30A4
MBD6
SIPA1
ARID5A
RGPD2
RGPD1
IKZF4
FXYD3
SF3A3
PLPP2
ANHX
ARHGEF16
RHOC
SH3BP1
PLIN2
LRP4
DHRS3
PPP1R13B
LPIN1
SPSB3
EPM2A
CTNNB1
DYRK1B
MAPK12
KMT5A
COQ10A
MACROH2A1
MCPH1
S100A16
DUSP9
COLGALT1
HMX3
DCP1A
EFCAB14
ANP32A
WDHD1
SOCS4
ZNF792
GALNT9
TATDN3
NSL1
MPP2
HES5
ZNF44
DUSP10
CACNA1H
ETV4
EXTL1
ABHD12
C22orf39
RASSF7
LMNTD2
ZNF615
PHLDB1
TSPAN14
SPIRE2
TRNP1
ZNF639
AGAP2
PPP1R16B
ADAMTS2
GALR2
SUN2
SIAH1
VANGL2
SLC26A11
SNRK
GPR108
MBD2
AURKAIP1
DCAF10
STRN
SZT2
MED8
DRG2
GAS2L1
RAD54L2
NEK2
PCCA
BACE2
TLE3
SKIDA1
MLF2
NBPF12
CCDC50
PDE2A
M6PR
KLRG1
LDLRAP1
RBM15
PPM1H
ADAMTSL4
RPRM
FAM210B
PMAIP1
ISCA1
CLEC4C
SLC2A14
RARB
STK11
TBC1D22A
MYBL1
PSMF1
MAN2C1
CPA1
FAM207A
STRA6
FXR1
NMRK2
IDH1
FAM120B
LMNA
MEX3A
TRPM1
CTSC
MFSD8
ABHD18
RRP1
CYB5R2
UNC5D
GLI3
DDX3X
SHH
MELTF
SPIN1
DENND4B
CCNDBP1
SERPINE1
SNAP47
JMJD4
TRAK1
DUSP12
VOPP1
TRIP4
MRPL39
NINJ2
NFAT5
DSC2
TBC1D8B
XPR1
CHCHD1
FUT10
DMPK
DNAJB1
KIF13B
SLC39A14
SEPTIN6
SMIM5
FASTKD1
KIF26A
HINT2
CDX1
CHD4
HPN
GSN
PHB2
REST
KIAA1522
C1R
LHX2
GADD45G
MED9
CLUAP1
TBC1D19
VCAN
TUBB2B
PTK7
CEND1
SNX16
PKM
MAP2K7
CMSS1
FILIP1L
BHLHA15
IBTK
MED23
TYROBP
PEX5
SREBF1
TRMT2A
RANBP1
NFAM1
TRIAP1
KMT2D
FABP3
HOXA4
STRAP
TEX264
YTHDF2
SNAPC5
SMPD1
AJUBA
TMC5
APOC4
CA14
CACNG4
PDE8A
GTF3C3
OTOP1
CRIP1
CCDC88A
EIF2D
TMEM242
ZSWIM4
SLC39A3
STOML2
RIF1
VARS1
CPSF4L
CLK1
AOPEP
TTC4
BRICD5
AIF1L
CBX3
HNRNPA2B1
PARL
FIGNL1
TPM3
AMOTL2
STMN1
RBPMS2
ANKRD28
AK2
DMAP1
BICD1
FBXO32
DUSP16
CCDC28B
PNKD
RCOR3
CCAR2
ECSIT
MAD2L2
IL11RA
LAMC1
SLC51B
SULT1A1
SORBS3
SNRPA
C19orf54
HSF4
GPATCH8
MYADM
ZNF3
REPIN1
FRA10AC1
TAF6L
GPRIN2
SLC39A7
RXRB
ALG10
SEMA6D
KCNB1
PLAAT3
TMEM222
LZTS2
FAM110D
NCOA2
BRWD1
ALDH7A1
CLIC5
PPP1R32
MRPL34
ABHD8
ACTR6
RNF220
TRIM54
QPRT
PEX3
ADAT2
TBL3
FAM72A
PGLS
RBPJ
DUS2
DDX28
ROCK2
RBP1
MSX1
HMGB1
USPL1
MRPS15
SLC25A36
GADD45B
RHOT2
CYP11A1
RFX1
BARHL1
MUSTN1
BCL2L2-PABPN1
BCL2L2
DSCAML1
P2RX6
TRAPPC10
TSGA10IP
SNRPN
PHACTR1
TRIP12
FBXO36
DEDD
ZNF141
NCAM1
PELATON
SULF2
FGFR2
VAMP2
EFEMP2
BIRC6
PLOD2
NFILZ
C2orf73
LINS1
ASB7
SLC4A8
NPM2
TXNDC11
IST1
NOTCH2NLC
ZNF346
PDCD4
ZNF677
PCBP3
FLOT1
SNUPN
U2SURP
SP7
SSNA1
ANAPC2
MIEF1
ADIPOR2
DBF4B
CLDN7
PACSIN2
EMC8
COX4I1
TNFRSF12A
DOK7
APC2
PRDM14
NKAIN4
L3MBTL4
CCDC59
ZNF341
PICALM
CTDSP2
TRIM26
RSBN1L
USP24
IQUB
PEX2
PACS2
MAGEB3
NACC1
NANOG
CIAO3
CHKB
IQCE
CEP70
RBM15B
KCTD3
ZNF512B
VAMP4
TUT4
NEFH
ZBTB7B
KIAA1958
C9orf147
PFN1
GULP1
SPEG
SMARCD2
OBI1
MKNK1
SYT2
AIFM2
ZNF76
SLC24A1
INTS14
ACSL3
PIPOX
LARP1B
C1QTNF5
SLC44A1
ATR
WDTC1
SYDE2
NFIA
KLHL4
GFER
RNF19A
UCHL5
RO60
SSBP2
C17orf75
USP9X
THEM4
LRRC36
KCTD19
HORMAD2
GARS1
CACNA1G
ANP32B
ACAD9
WDR36
ZSCAN20
MOCS1
HNRNPD
MTRF1L
ZFYVE21
XRCC3
ZFP36L1
LPCAT4
MAGOH
GFI1B
E2F3
SEC23A
C12orf73
ZNF721
PIGG
HP1BP3
CACNA2D4
CREG2
TIMP4
LPAR1
LGR6
GFPT2
MAPKAPK5
COMMD2
RBM7
C11orf71
HSP90AB1
CAPS2
CRABP2
PLEKHA5
ZFYVE9
PRICKLE1
MAP1B
SHB
PIK3AP1
ANGEL1
AGK
SOD2
WTAP
NDRG2
ITPRIP
RGPD8
RGPD5
PDE4C
CSTB
SYP
ELOVL6
ZNF414
COPS7A
DENND6A
PRR7
BCL9L
STEAP3
TP53I3
VXN
FNTA
SOWAHD
GEMIN7
SPSB2
ARHGEF3
GTPBP3
B3GLCT
ANO8
GPSM1
MTCL1
IL11
SLC35E1
SCNN1G
CYB5R4
STARD4
ZNF212
DDT
DDTL
ZNF256
USP44
CCDC174
CDC42EP3
EBAG9
ZBTB37
NF1
FUNDC1
MRPL4
MOB4
GFRA1
SPATA1
GNG5
NOTCH2
PHTF1
LRP6
SLC15A3
CEP41
ATP10D
SLC19A1
INO80B
DCP1B
LIMK1
MECOM
CAPRIN2
ELF2
PSMB2
THPO
DYRK4
SERTAD3
NDUFAF3
DALRD3
TIGD1
EIF4E2
NUDT15
SAR1B
ZFP64
BCAS4
ZBTB20
NSFL1C
ZC3H15
SIK3
SPAG16
CREB5
ART5
ZNF469
DISC1
BCAR1
FZD1
TRIM67
THBS3
MTX1
CHCHD3
BCAT2
OXA1L
DRG1
PHACTR4
CHD1L
PRKAB2
ASCC3
SLC2A6
L1CAM
KEAP1
AZIN1
CALM1
ESRRG
SLC25A13
UNKL
KIF21A
PLBD1
KIF19
NDUFA10
IRF9
NOTCH2NLB
LIN28B
SRXN1
RAD52
GRIN2A
NAMPT
ZBTB38
JAK1
MAPT
BAZ2B
ISLR2
TRMT61B
MRPL44
TP53INP2
YAF2
FEZ2
IER5L
C16orf86
LTBP1
PHF19
S100A2
CTDP1
DNAJA2
ABCA3
NCKAP1
SAMM50
RFC5
TM2D3
U2AF1L5
U2AF1
MYO3A
HESX1
LSM8
APPL1
FGD4
RIPK1
UBC
MED26
DNMT3A
BRD2
ADA
PRTG
JAG1
CYCS
CD55
ZNF846
SRSF11
LRRC40
ADAM17
DGLUCY
TMTC3
CEP290
ELMO1
METTL9
GTPBP8
TAPBPL
HEXA
FAM3B
NEUROG1
HSPE1-MOB4
HSPE1
HSPD1
ARID2
WDFY2
VENTX
SLC25A6
NUTF2
CENPT
JMJD1C
CAPN2
COX20
USP14
INTS7
DTL
SIGMAR1
FLYWCH2
HPS3
LRRC10B
MRPS31
KANK2
E2F7
MANSC1
PATJ
DNAH14
NTPCR
UCP2
RTN2
CDKN2D
TMCC2
TJP3
GSTO1
GXYLT1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
NME6
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
UPF2
PES1
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
SART3
IQCG
DPH6
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PTGES2
PIN4
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
SP2
C16orf91
RPN1
GTF3C4
DDX31
GORAB
ATOH1
CNPY2
BNIP3
ZNF383
BBS9
IGFBP2
MRPL38
GLT8D1
TTI2
PDHX
APIP
WDR74
PCBD2
HOXA2
DNM2
ID2
ANKLE2
P4HB
TEPSIN