ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
ING1
MRPS28
PXYLP1
NDUFS7
CBX5
HNRNPA1
CNOT2
OTUD7B
RBKS
BABAM2
POLD2
RARG
ZBTB7C
SMARCD2
KANSL3
ITFG2
ZCCHC24
ATXN1L
GPRC5A
REEP6
PCSK4
TAF1A
DONSON
PKN2
CLK1
METTL3
HORMAD1
WDR7
FLOT1
TUBB
RAE1
ZFP36L1
MTRNR2L2
GATD3B
GATD3A
DYNLT1
KDM3A
ZGPAT
ARFRP1
NANP
CCDC174
LOC114841035
FKBP2
STX18
MBD2
RASA4
ASNSD1
ASDURF
GPR108
MAMLD1
EIF5
MAML3
CTF1
NR2C1
MTRNR2L8
RASA4B
NUDT15
UQCR11
ZNF395
BACE2
USP42
RARA
SKIDA1
IMPA1
C19orf12
HECTD4
CTBP2
UROS
BCCIP
KLK10
TRMT1L
SWT1
LIPA
TRIP12
FBXO36
USP1
PTGES3
TMEM241
CLCN3
FAAP24
CEP89
STAT2
DUS1L
SNRPA
C19orf54
EFEMP2
ATP6V0B
NCOA7
PMPCB
CFAP69
CASP9
PPP2R5A
ANKS1B
MIGA1
TRABD
CYB5R4
MRPS31
TEX264
CBR4
INTS5
SLC29A2
NCLN
SEPTIN2
HDLBP
UQCRC2
FOXP1
PPP1R13B
USP37
CNOT9
SZT2
MED8
PDCL
RPL37
ALDOA
KMT5A
FXYD3
SREBF1
MED9
RNF207
SMIM20
GMNN
BAZ1B
DRG1
SLC25A16
GCN1
HGH1
SERTAD2
FKBPL
COLEC11
NPNT
TSPAN10
NPLOC4
RASAL1
NEURL2
CTSA
RNF121
LOC100133315
SENP8
MYO9A
MRPL54
CHCHD1
SH3YL1
ACP1
ADAM17
RNF220
ST8SIA6
MINDY3
CCDC59
SLC11A2
BAG6
TP53INP2
AARS2
TECPR1
MELTF
ABHD3
SH2B1
CCL28
GDPGP1
CIB1
RGPD2
RGPD1
C12orf73
RPL5
TDRD3
TNPO3
SPIN1
HBP1
AFF1
KLHDC2
ROGDI
PARP9
DTX3L
FDXACB1
C11orf1
MRPS16
RPS3A
PCTP
TTK
VARS1
SOD2
WTAP
FABP5
NAA40
TLR5
EXOSC4
MYADM
SCNM1
LYSMD1
RPS19
CDKN2D
ENTPD5
BBOF1
SERPINI1
PDCD10
PCCA
HDAC9
DBP
ATXN2
NOTCH1
EPM2A
KBTBD3
ZNF133
AASDHPPT
SLC39A9
ERH
SLC30A4
SAMD12
CLK2
SIPA1
RIMS1
TAF6L
DNAJC27
ACYP1
ZC2HC1C
MKRN3
DUSP4
CGGBP1
C3orf38
DHRS3
BRD2
ARIH2
ANG
RNASE4
LCN2
MBD6
CEP70
TRIM38
AP2M1
KLF5
MIEN1
SRCAP
LOC730183
ZNF77
TMED10
MINDY2
ARID4A
UBE2V2
MDM2
DZIP3
CIP2A
PRUNE1
MINDY1
BCO2
SLC25A6
DPP9
ALKBH7
RBM19
SEC24C
ECH1
IFT22
ZNF318
SP2
SKIV2L
NELFE
ABHD14B
TXNDC11
CD46
SMPD2
PPIL6
LRRC1
ACSS3
ESRP1
RPS8
KCNQ4
ZNF746
ATP6V0E2
GPATCH8
INPP5K
KAT6B
AP1B1
ETFRF1
CFAP94
MACROH2A1
ZNF384
LEKR1
SLC25A35
ZNF85
SEC23A
ANXA7
SNX12
NEPRO
STAM2
GBA
LSM8
FDX1
URGCP
OTUD5
ADA
URGCP-MRPS24
POMP
TBC1D22A
MRPS36
PIM3
OSGIN2
SCAP
AKTIP
HNRNPA1L2
MRPS33
DNAH14
DTX3
CNDP2
GRK6
HEXIM1
CCDC71
DDT
DDTL
CCDC102A
SPAG16
SNRNP35
LRRC61
ACTR3C
TP53INP1
LARP1
IVNS1ABP
DKC1
POLDIP3
TRIM26
SMAGP
SBNO1
ANAPC15
ACBD3
ADM
HIKESHI
TAOK3
KBTBD2
TBC1D8B
WWTR1
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
CAND1
PRR3
GNL1
IQANK1
FAM83H
KCNS3
B4GALT6
DYNLL1
SRSF9
RNGTT
LUC7L2
SYS1
ESR2
SUDS3
SEC61B
ALG2
ZXDC
ZNF492
CXCR4
NFKBIA
DCAF7
SLC25A53
MFSD11
SRSF2
FAM3C
SLC22A4
HIC1
KMT5C
ZNF446
RPL34
EXD2
CCDC120
C16orf70
UFD1
CDC45
XRCC6
DESI1
CEP78
LEO1
BAG2
MCOLN1
PCDH1
AXDND1
CYP4F11
MROH1
PSMA3
RBM7
C11orf71
PAXBP1
ENOX2
LMF1
SOX8
IRF9
GBF1
SRSF3
COX5A
SIRT4
NEK2
MYL12B
PRKD2
MAP4K5
ATL1
ZFP41
NUDT17
PEX2
STK11
SLC38A1
ZNF563
C12orf65
MT2A
SLC3A2
SCYL3
IRX3
ISYNA1
MFSD8
ABHD18
PCBP2
FZD4
CALM2
CSTB
BBS9
SREBF2
P4HA1
AASDH
DDX1
FAM114A1
TMPRSS12
PLBD2
DNAJA2
ZBTB44
SMG5
C2orf73
SIKE1
OSBPL1A
ACADM
THAP7
ZNF69
DNAH12
EPHA7
GFM1
LAMTOR5
NDUFA10
MRPL34
ABHD8
MRM1
ENOSF1
CLK4
ST3GAL4
MAPT
TRAPPC6B
TENT2
PLEKHG3
RAB11FIP2
MPZL2
PELI2
CASD1
FMC1-LUC7L2
FMC1
CLDN7
ZDHHC3
EXOSC7
DSG2
ADRM1
RPS14
RNF135
MADCAM1
AGPAT3
KRIT1
ANKIB1
ZNF76
PRELID3B
HSPA6
PRPSAP1
CD320
AMER1
POLR2B
UFSP1
ZNF891
ZNF10
DYM
PSMD14
OSR1
DNAJB1
CRNKL1
CFAP61
TECR
CLDN4
LRRC59
NLRX1
RNF168
BLVRB
SPTBN4
DYRK2
SYCP2L
HNRNPLL
SNRPD1
CCDC9
TACC2
TMEM209
WARS2
DTNB
MRPS18B
LTBR
POLRMT
EFS
HUS1
PNKD
TOE1
MUTYH
SLC4A2
DHCR7
CDK5
ZNF484
SLC30A7
COP1
EXTL2
KIF20A
BRD8
WDR81
OSER1
TAF2
SEMA3E
CCDC130
YIF1B
SH2D3A
CYB5A
NOD1
DDX5
SNX3
ZBTB45
ELP6
SHPRH
ARHGAP35
TAF12
SRSF5
DENND6A
ZNF572
SYPL1
TMEM129
TACC3
SUPT7L
SLC4A1AP
C2CD4D
RUFY1
CCDC38
AMDHD1
KRT7
ADCK1
NUP85
HIBADH
NIBAN2
DCAF10
CTNNA1
GOLT1A
TXNRD1
PAK4
COMMD3-BMI1
COMMD3
OBP2B
KLHL7
ANKRD50
GABARAPL1
GXYLT1
RBM15
HINT3
CDK13
NAGK
SIK3
CYB5R2
PAN2
THUMPD3
GSPT1
HES4
CUL5
PPIL2
FASTKD2
ZNF506
POLR3B
TMEM53
ARMH1
RPS12
HINT2
MDP1
KHNYN
CBLN3
CRY2
R3HCC1L
REL
MON1B
PNISR
STRAP
IDH3B
ZNF675
RNF19A
SMAD1
FOXJ3
WDR43
AGPAT1
RNF5
DMAP1
HLA-E
UQCRH
LRRC41
GSE1
KHDRBS1
KIF22
ITGB3BP
EFCAB7
NR4A1
PLPP2
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
PES1
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
SART3
IQCG
DPH6
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PTGES2
PIN4
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
SPATC1L
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
PMAIP1
C16orf91
HOXA4
RPN1
GTF3C4
DDX31
GORAB
NEUROG1
ATOH1
CNPY2
BNIP3
ZNF383
IGFBP2
MRPL38
GLT8D1
TTI2
PDHX
APIP
WDR74
PCBD2
HOXA2
DNM2
TPRA1
ID2
ANKLE2
P4HB
TEPSIN
NDUFAF8
ALKBH5
RPS10-NUDT3
RPS10
NPAS4
CCNDBP1
TBX2
CLGN
RAB5B
ZFHX3
DOLPP1
CAMTA1
HSPA1B
CBFA2T2
PDHB
SP5
ATF6
TLE4
ANK2
UPF3A
RBPJ
KATNB1
PANK2
FRA10AC1
ZNF687
PGK1
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
QPRT
GATA4
NRL
SRSF11
TBX3
ANKHD1-EIF4EBP3
ANKHD1
KIF21B
LRRC40
ARRDC4
ST18
PDE4D
ARSG
SPCS1
TLE2
HOXA3
IQSEC3
TNFRSF19
RMND5A
DCAF11
SP1
NR2F1
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
INSM1
STIP1
ATP5F1B
SLC45A4
CBX3
KAZALD1
RUNX1T1
CS
GPCPD1
HNRNPD
MALRD1
CRLS1
EVI5L
GRSF1
NELFA
EIF2AK3
MTF2
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
POLG
KNL1
HEXIM2
DAGLB
SHF
MLEC
MYRIP
ANKRD28
FBXO31
CCDC43
SACM1L
SMG6
PRMT5
RBBP7
EIF3D
DIABLO
NLK
RAB37
ZNF503
RHBDD1
RTN4
SERPINE1
CEP41
HNMT
HMGB1
SERPINB1
NKD1
TMEM101
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
NCOA2
G3BP1
CDS2
EIF4H
DUSP9
KIAA0319
ILF2
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
PRKACA
ARHGAP4
KMT2A
NRSN2
BFSP1
TOP2A
TCTEX1D4
BTBD19
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
PRDM10
USPL1
SH3BP2
PIKFYVE
FAM107B
GOT1
TBL1X
INAFM2
TMEM60
PHTF2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
B4GAT1
LCK
CHD8
HNRNPA2B1
MAF1
CMSS1
GFOD1
YTHDF2
STX16
CASC3
TSPAN4
TUBB4B
HPCAL1
LBX2
POLR3E
ICAM1
PARK7
SEPTIN9
PRDM12
PCGF1
TCHP
ANP32E
DLC1
CELSR3
MPND
ADAP1
NEO1
HSP90B1
HOXB4
DUSP12
UBE2C
IRS1
BRWD1
HNRNPC
TANK
MEPCE
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
H4C12
MVD
HSPE1-MOB4
HSPE1
HSPD1
CYCS
LPIN1
ZNF148
ZCCHC3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
ZCWPW1
HOXC5
CCDC107
POLR2J3
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
TCF4
SERPINB9
ZNF740