ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662636 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◣ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PGK1
SPATC1L
SP2
TEPSIN
NDUFAF8
RAB5B
ARRDC4
DOLPP1
DNM2
OSBP
P4HB
KATNB1
STIP1
NLK
ZNF687
UBE2C
SP1
TOP2A
GOT1
TCERG1
G3BP1
GLRX5
TDRKH
EVI5L
ACTL6A
ANKHD1-EIF4EBP3
ANKHD1
STT3A
TUBB4B
RFX1
ARID4A
HSP90B1
EIF2AK3
KAT7
ATP5F1B
PHPT1
PXMP4
SKA2
PRR11
HNRNPUL1
HSPA5
TMX2
MED19
RFWD3
SHC1
CKS1B
PRR14
TMEM60
PHTF2
JUP
TOM1L2
DRC3
MVD
ZFYVE21
XRCC3
TMEM94
DROSHA
C5orf22
RECQL
GOLT1B
SNRPF
DCAF7
ELOC
TEDC1
RBM27
ARNTL
SPSB3
CIC
MPV17L2
MSANTD4
HNRNPC
TMEM218
KIAA0319L
NCDN
LRRC45
CENPX
H2AZ2
ILF2
ARMC1
YIF1A
TRAF2
ATP5MC1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TOMM40
FAAP24
CEP89
KAT6B
PRKACA
MAF1
MTMR4
OS9
KPNB1
MTMR12
PWWP2A
TBC1D10B
MYLPF
PDK2
XAB2
CNOT1
GPR108
PGP
FLAD1
COQ8A
ZNF77
RPLP0
IMMP1L
ELP4
KHSRP
AKR1E2
CAMTA1
HNRNPL
TBCCD1
DNAJB11
SLC25A25
NAIF1
SPAG7
SARNP
ORMDL2
EEF1AKNMT
CDC23
VIRMA
MED24
MPND
GOLPH3L
PROSER3
HSPB6
COPZ1
PSMD4
FAM72A
SRGAP2
ALKBH7
TCF19
CCHCR1
HGS
ARL16
PPWD1
CENPK
DCTN4
PPP1R3F
RAD51B
METTL17
SERP1
EIF2A
ANAPC5
LRCH4
FBXO24
YJU2
TICRR
WDR25
WARS1
MTR
PHB
SSR3
NFATC2IP
NUMB
FDPS
C16orf95
HIKESHI
GBF1
SEL1L
ARL17B
ARL17A
ETF1
ZBTB3
TMPO
AGPAT1
RNF5
CENPF
CNEP1R1
PRPF40A
ARL6IP6
ANP32A
MANF
GATAD2B
HMGCS1
DNAJC14
KDM4D
CWC15
SRP9
MTFR2
LENG1
TMEM217
TBC1D22B
FAM72D
FAM72C
SRGAP2B
MSMO1
FRYL
PNPO
UTP23
H2AC19
H2AC18
MLH1
EPM2AIP1
AK2
MNS1
ABHD2
VPS26B
NCAPD3
ENSA
MORN4
BCAS3
PANK2
CCDC77
KHDC4
NCBP2AS2
NCBP2
FAM161B
COQ6
IARS1
HBP1
ZBTB5
ZSWIM3
ACOT8
POGLUT2
BIVM
DCUN1D4
CALR
UBE2T
ZSWIM4
POC5
VCP
PRRC2B
NDUFS8
CHCHD6
TTLL5
ERG28
ECT2
PAN2
CNOT3
ZNF680
UBALD2
BRIP1
KDM4B
SPTLC2
TSACC
CCT3
WDCP
GSK3B
ZNF785
RUBCN
UMAD1
BABAM1
TMEM160
MSTO1
NDUFA2
IK
WBP1
STIL
HACL1
BTD
RAB11B
HMGCR
GATAD2A
MTOR
NGDN
ZNF691
CKAP5
ANP32E
GLCCI1
CBX5
HNRNPA1
ZDHHC16
EXOSC1
SIVA1
RBM48
PEX1
UNG
DDA1
BRAP
ACAD10
FBH1
ANKRD16
TROAP
NUDT2
KIF24
DDOST
SLC25A42
SIN3A
IVD
CYTH2
HNRNPAB
MCCC1
STK40
AP3M2
RAB4B
MYH10
IFT27
ISOC2
H2AX
KCTD2
ATP5PD
ZNF688
MTRR
FASTKD3
RWDD1
PRDM10
RBM42
WDR45
SRGAP2C
FAM72B
FAM126A
TXNIP
ASF1B
ACAP2
FRMD5
GFM1
RPS20
MCM3
PCNX3
WDR89
MAP3K3
NABP2
CCDC146
ZSWIM1
INCENP
CYCS
CHCHD2
ZNF143
RGMB
H2BU1
H2AW
FAM111B
LTN1
ALKBH3
C1orf109
CFAP43
BPGM
CDKN3
CHD6
NDUFAF2
ERCC8
THAP1
RPL27
SDHD
DDX39A
MCM10
ZMAT2
H3-3B
USF3
DDX49
COPE
ZBTB26
RPS5
PAIP2B
DCAF15
TRAFD1
PODNL1
FAM156A
CCDC66
STARD3NL
NRL
DCAF11
ARHGAP19
CANX
ABCB8
ABL1
GOLGB1
DICER1
ZNF493
RBM15
KANSL2
FBXO5
CCT7
ATP7B
ALG11
PRADC1
KCNAB2
TTC14
MTRNR2L8
SLC33A1
ZNF727
MRPS28
TRAPPC6A
BLOC1S3
CDR2
IBTK
EIF4A1
WBP1L
HINT2
SLC25A28
HDGFL2
MON1B
TXNL4B
DHX38
SETD3
CCNK
ZWINT
CEP131
LMAN2
CYB5B
PPOX
ZNF775
MRPS30
NUCKS1
BUB3
CYLD
CKS2
NFE2L1
CDC25C
LZTFL1
GET3
NEMP1
SPRING1
RNFT2
RAB3A
INTS3
RPS26
DHX8
IGSF9B
PPP6R3
MFSD11
SRSF2
SAMM50
AGFG2
POP5
SPC25
SLC25A19
NDUFB3
FAM126B
RBM14-RBM4
RBM14
CCDC61
FDFT1
ZNF595
MRPL24
BRCA1
RTRAF
UVRAG
TOGARAM1
KLHL28
YIPF4
MXD1
SNRPE
PRMT1
PCLAF
TNRC6B
PMS2
AIMP2
TOM1
LAS1L
PICK1
SPRYD3
KDM4A
GLO1
PPP2R1A
ZBTB6
NUF2
CNPY3
CCDC130
NUP107
PNN
VPS35
WDR46
PFDN6
UBP1
KLHDC10
AP2A1
OPA3
LAPTM4A
FAR1
HSD17B12
PPP2R5A
RRBP1
CGGBP1
ZNF654
TPRKB
OXNAD1
DPH3
ZSCAN20
DLGAP5
NDUFB5
MRPL47
BUB1
F11R
GID4
ATPAF2
PDXP
ZBTB9
TYK2
GRK6
GGCT
ZFAND2A
ZNF555
KRR1
EIF1AD
BANF1
SF3B5
GINS2
CDC6
PABPN1
ZNF574
RNF181
FCF1
AREL1
EIF3F
TMBIM6
FAM156B
PCNT
C21orf58
ESR2
DPH2
JPT1
RTN4IP1
QRSL1
NME7
BLZF1
H4C12
LCMT1
SCNM1
LYSMD1
CDK5RAP3
ASPM
TCP1
MRPL18
PCBP2
RAP2A
ERI3
POLR1H
HLTF
LINC02210-CRHR1
CSTF1
AURKA
TOMM40L
ZNF564
DUSP10
RAP2B
GHITM
CCDC59
CDK5RAP1
TESK2
PEX2
H2BC14
H2AC14
ELK1
VBP1
MVK
ENPP5
SLIRP
ALKBH1
DNAJB5
TPRN
SIRT2
NFKBIB
PPM1B
PSMA5
LMCD1
NOL6
TMA7
CCDC51
GINS1
ANAPC15
CENPA
MFAP3
FAM114A2
CHCHD3
RUVBL1
GPR137
ACTN1
CAND1
ZNF141
POLR3A
PDIA4
RNF34
C22orf39
RBM4
TIMM17A
ALG10B
KMT5C
PA2G4
PIP4P1
USP16
INTS1
SCAI
PRCC
SOX4
BBX
FAM204A
PPP1R12B
FRG1
LRIF1
KMT5A
FAM83D
RAB5C
KCTD9
CDCA2
RAB6A
EHBP1
CREBRF
PHF14
TRIM68
INTS4
ZMYM5
PCYOX1L
DCAKD
NMT1
PGBD4
EMC7
KIF20A
BRD8
PPP2R5E
SDF2L1
NEU1
SLC2A8
ZNF736
CDC20
HSPA2
PHF12
CDKL3
IDI1
SLC39A9
ERH
TPCN1
IQCD
TBRG1
LSG1
LIN52
ALDH6A1
FAM117A
NUDT5
CDC123
BAZ1B
FDXR
MRPS23
PGAP3
ERBB2
MBD1
CENPM
FBXW11
ZNF724
H2BC4
H2AC6
USP42
RABL3
GTF2E1
DGLUCY
RPS6KA5
PIN1
TAF8
TSPYL2
HAGH
FAHD1
BLM
OGFOD1
NUDT21
HIBADH
SRPRA
AURKAIP1
PC
TFB2M
CNST
RLN2
ZNF138
LOC101927572
ALKBH6
PRPF6
LARS1
MORF4L2
LCA5
ATP6AP2
H2AJ
HMGB2
XRCC4
TMEM167A
RPL13A
RLN1
CEP164
ETV5
DDT
NUP214
GSTO2
STAT2
FAM222B
TUT1
CCDC137
EXOC4
TMEM41A
TXNDC16
GPR137C
MIA3
HMGB1
SELENOI
ADGRF3
C5orf51
OSCP1
FRA10AC1
PARL
KBTBD8
H2BC13
H2AC13
TIMMDC1
TNFAIP1
IFT20
PARPBP
NUP37
H2BC12
H2AC12
MRPL16
SNRPA
C19orf54
PMF1-BGLAP
PMF1
PSMA3
FANCF
CFAP45
STARD4
CSNK1G3
MZT1
BORA
CLNS1A
TSR2
TOB1
PDCD6
OTUD6B
HYLS1
C2orf42
CYB5A
PSMB7
RPL37
SCOC
MDM1
GORAB
TTBK2
SLC30A9
TULP3
SASS6
FANCM
ARL6IP1
C12orf29
EIF3M
DDX50
KCTD16
YIPF5
FAM76B
CEP57
NRDC
ROMO1
NFS1
CSTF3
LNP1
MIIP
TOMM70
UTP25
H4C15
H4C14
ATG2A
SF3B2
WDR53
FBXO45
TIMM23
DMXL1
SNRPG
SEC23B
PARP3
RRP9
TFAP2C
YWHAQ
MPHOSPH8
NPAT
ATM
PAF1
STAT3
PLPBP
OXSR1
MAMSTR
FNBP4
ZCCHC9
VCPIP1
C8orf44-SGK3
ZNF430
PGD
FAM111A
MDC1
SFPQ
NME1-NME2
NME1
PTBP1
HSPA8
ZDHHC12
DDX10
GTF3C5
BORCS7
ZNF774
WDR3
GDAP2
EIF3D
TMEM183A
ISY1-RAB43
ISY1
TAF1A
ALG10
ELAC2
IL6ST
C10orf143
HJURP
NXT1
CCDC15
TTI1
RPRD1B
SLC46A3
ETFBKMT
CRNKL1
CFAP61
ALDH3A2
GMNN
PPP1R11
H3C2
VPS29
RAD9B
MRE11
ANKRD49
ANXA6
SWSAP1
TCTN3
UFD1
CDC45
ITFG2
ATG4C
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
NUP85
SUDS3
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
REXO1
TSNAX
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
PES1
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
RBKS
BABAM2
TTC8
SUPV3L1
SART3
IQCG
DPH6
VARS1
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
BAG6
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
TM9SF1
NEUROG2
DDX39B
ZGPAT
ARFRP1
LRR1
NEUROG3
PTGES2
PIN4
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES1
PDE12
MTRNR2L2
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
RARB
STK36
RNF25
MRTO4
EMC1
SKIL
VEZT
FGD6
EIF2S3
GADD45GIP1
RPL7
RDH10
SEC11C
BICRA
CDC73
FLOT1
PMAIP1
C16orf91
HOXA4
RPN1
NDUFS7
GTF3C4
DDX31
NEUROG1
SH2B1
ATOH1
CNPY2
RARA
DHRS3
BNIP3
ZNF383
BBS9
NEURL2
CTSA
IGFBP2
MRPL38
GLT8D1
TTI2
PDHX
APIP
WDR74
ZNF746
PCBD2
HOXA2