ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236745 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◣ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

EFTUD2
CCDC103
RWDD1
NUP85
GOSR2
MRPS7
GGA3
SUDS3
HADHB
HADHA
NVL
PSMD12
RABL2A
RABL2B
ZNF335
POLR3F
DZANK1
SLC35B1
RBBP5
CACTIN
MAPKAPK5
BLCAP
TSN
RPS12
TSNAX
POLR2E
NME6
ZRANB2
PSMD1
VDAC2
NUP205
VTI1B
PNO1
PAK1IP1
C6orf52
NCLN
STAM
RPL21
RABGGTB
VARS1
EXOSC5
BCKDHA
COX7A2L
LYRM4
FARS2
ISCU
SART3
REXO1
OAZ3
MRPL9
DCTN1
RPS23
ATP6AP1L
C17orf80
FAM104A
HSPA9
SEC61B
ALG2
ANAPC7
TTC8
PI4KB
C19orf48
UPF2
PSMG2
CEP76
RPS27A
CLHC1
TBCK
AIMP1
CAPRIN1
XPNPEP3
ST13
DYNC1LI2
SUPV3L1
DPH6
IQCG
RPL35A
IRGQ
ZNF576
BAG6
PES1
UFM1
SELENOF
HS2ST1
MRPS5
COMMD1
CCT4
STAM2
SMC2
ACTR10
ATP5MG
PAF1
SRD5A1
FARSB
NDUFA4
IPO13
PCBP1
GOLGA5
TMEM101
SUCLG1
PROSER1
NHLRC3
CD24
USP1
RPN1
TMED1
EIF4ENIF1
SKP1
RPS29
LRR1
DDX39B
GMEB2
CDC73
ICE1
C16orf91
ADK
AP3M1
NDUFA10
PDAP1
BUD31
MTRNR2L8
GORAB
PIN4
RBKS
BABAM2
TM9SF1
OSGEP
APEX1
UBE2I
GTF3C4
DDX31
TAF9
RAD17
AK6
RPS10-NUDT3
RPS10
DUSP12
SF3B3
COG4
MRTO4
EMC1
MLEC
STK36
RNF25
GADD45GIP1
BICRA
SEC11C
MRPL38
PCGF1
AXDND1
SRSF11
LRRC40
UBAP2
PTGES2
ARHGAP11A-SCG5
ARHGAP11A
RPL7
RDH10
ZBTB18
CNPY2
APBA1
PAGR1
CCDC43
WRAP53
RPS24
NFATC4
PKN2
GBA
YTHDF2
CBX5
SNRPD2
QPCTL
EIF2S3
ZNF383
KIAA0319
CHD8
ARHGEF1
CHN1
CBFA2T2
EIF4H
MYCN
PHOX2B
HSPA1B
ALKBH5
ANK3
MICOS13
HSD11B1L
NELFA
GLT8D1
SPCS1
EYS
HSPE1-MOB4
HSPE1
HSPD1
NRXN1
DBNDD1
VPS50
HEPACAM2
TOMM20
CS
RTBDN
TANC1
PDHX
APIP
RRM2
GGA1
MAN2C1
RBM25
FAM162A
CCDC58
DYRK1B
LRRC43
WDR74
NHLH2
RARA
TBC1D16
CCDC40
SERTAD3
CLTC
TNFRSF19
KDM3A
RUNX1T1
ANKLE2
DDX1
SH2B1
CBX3
HNRNPA2B1
CMTR1
MTMR14
UROD
HECTD3
KRTAP3-3
MEPCE
ZCWPW1
EFCAB2
GATAD2A
IDUA
PIH1D1
SARM1
TIMM10
CCT7
PRADC1
MLF2
TMEM38A
SMIM7
PTPN3
NEURL2
CTSA
DGKZ
UQCRC2
CALR
TCHP
TCP1
MRPL18
NCAPG
TMEM60
PHTF2
CLASP2
BMF
C12orf57
TBPL1
STAT3
RAD52
C1orf185
TSPAN11
BRWD1
NAP1L1
ACVR1
R3HCC1
DDIT3
SLC25A25
RUNDC3A
MTRNR2L2
CIPC
SIRT4
ATG101
PAXBP1
EFNB1
TLN1
CREB3
PARP2
MMP20
H4C15
H4C14
ZNF331
CYTH3
BRD4
PHIP
PRKCSH
CCDC151
TCF4
NEUROG2
ZGPAT
ARFRP1
NEUROG3
HES1
PDE12
RARB
SKIL
SPATC1L
VEZT
FGD6
FLOT1
SP2
PMAIP1
HOXA4
NDUFS7
NEUROG1
ATOH1
DHRS3
KAT6B
BNIP3
BBS9
GPR108
IGFBP2
TTI2
ZNF746
PCBD2
HOXA2
DNM2
TPRA1
ID2
P4HB
TEPSIN
NDUFAF8
MINDY2
NPAS4
CCNDBP1
TBX2
CLGN
RAB5B
KANSL3
STX18
ZFHX3
DONSON
DOLPP1
CAMTA1
PDHB
SP5
ATF6
TLE4
ANK2
OTUD7B
UPF3A
RBPJ
KATNB1
PANK2
CCDC174
FRA10AC1
ZNF687
PGK1
HUS1
SMARCD2
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
QPRT
GATA4
FOXP1
NRL
DPP9
TBX3
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
KIF21B
ARRDC4
ST18
PDE4D
NFKBIA
ARSG
TLE2
HOXA3
IQSEC3
POLDIP3
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
ZNF608
OSBP
PPCDC
ZFHX4
MRPL34
INSM1
STIP1
RNF207
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
KAZALD1
MACROH2A1
GPCPD1
HNRNPD
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
MTF2
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
POLG
KNL1
HEXIM2
DAGLB
SHF
MYRIP
ANKRD28
FBXO31
SACM1L
SMG6
PRMT5
RBBP7
EIF3D
SLC30A4
DIABLO
SREBF1
NLK
RAB37
COX5A
ZNF503
RHBDD1
RTN4
SERPINE1
CEP41
HNMT
HMGB1
SERPINB1
NKD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
NCOA2
G3BP1
EFEMP2
CDS2
USP42
ARID4A
DUSP9
ILF2
PNKD
TXNDC11
TDRKH
HTR5A
AIFM2
TRIB1
ID1
SEC14L1
HIBADH
WTAP
ZNF76
LUC7L2
PRKACA
ARHGAP4
MBD2
KMT2A
ROGDI
NRSN2
NR2C1
BFSP1
TOP2A
TCTEX1D4
BTBD19
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
PRDM10
USPL1
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
ACYP1
MAF1
SCAP
ADM
CMSS1
GFOD1
EPM2A
EXOSC4
STX16
CASC3
TSPAN4
TUBB4B
MFSD11
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
SEPTIN9
PRDM12
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
CALM2
HNRNPC
TANK
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
H4C12
MVD
CYCS
LPIN1
ZNF148
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
PRR14
YARS1
S100PBP
HOXC5
LRRC59
CCDC107
DNAJB1
POLR2J3
TMEM94
KIAA0319L
TMPPE
GLB1
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
NKIRAS1
C8orf37
GLRX5
NFE2
ARHGAP24
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
LIN28A
GATD3B
GATD3A
CIC
ETV4
MYADM
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
LNPEP
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
SRSF2
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
SKIV2L
NELFE
DYNLT1
PSMD9
HPD
HINT2
TOMM40
MEF2C
USP3
ACTL6A
TMEM9
IL6ST
SPIN1
L1CAM
CPVL
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
REC8
GLRA1
HMGN4
LZTFL1
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
PLEKHA6
AP3M2
CNPY3
PGP
C16orf54
CLDN2
ELF1
LDLR
RPS6KA1
MAP11
MFN2
CHN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
NBN
TIGD2
OPA1
PSMF1
ADRM1
CABIN1
C1RL
BAIAP2
PKM
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
TMEM259
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
SLC24A1
INTS14
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
KAT6A
ZBTB45
E2F3
SERTAD2
NADK
NBEAL2
MAPKAPK3
CISH
TBC1D8
TMCO6
ADGRG3
DENND4B
MAP3K3
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
MAD2L1BP
PIK3AP1
DZIP3
CIP2A
MTHFR
WBP4
NME1-NME2
NME1
WNT10B
PTP4A2
CD38
TOM1L2
DRC3
SLC35E2A
EIF4A3
CLIC4
PLIN2
DRAP1
C11orf68
GRWD1
SRPRA
UGT2A3
NFE2L1
FGFRL1
FAM110A
TMEM217
TBC1D22B
C12orf65
LFNG
IDH1
FGR
MED23
RPS8
RNF139
GFER
MTMR12
HNRNPA1
TRMT6
MCM8
BCAR3
H4C3
TMX2
MED19
PEX2
KLF17
TRIAP1
FLAD1
ZDHHC4
MIA2
FGA
OTX1
MRPS23
SERPINB6
CX3CL1
STMN3
RNF34
H2AX
MSANTD4
DDX3X
CLK2
VANGL2
TOB2
ZC3H6
ARFGAP2
PCK1
ELMO1
SLC51B
IFRD2
PDK2
AURKAIP1
BNIP2
DUS1L
C6orf89
KATNA1
UBL7
TOP1MT
PLEKHA7
PHF8
RCL1
PPP1R13B
THUMPD3
PMPCB
SDE2
SLC25A6
NFE2L2
C6orf136
IL27
SLC33A1
ZNF341
BDH1
MLLT11
CDC42SE1
TBCCD1
MGST2
ASB1
SLC25A45
HAL
SHFL
TRAF2
RECQL
GOLT1B
STK11
SPATA1
MCU
DENND2D
TEDC1
BZW2
TIMM44
LEMD2
UGP2
HERC5
NREP
KBTBD2
TRABD
SAXO2
FNTA
EFL1
CTNNB1
RXRA
PPIB
AHCY
PA2G4
PACSIN2
IST1
PHPT1
MVK
UPP1
ATF3
FDFT1
ACACA
ZNF414
COQ10A
LRRC45
CENPX
GDPGP1
CIB1
ZBTB20
ABCA12
RCOR3
SRRM3
PLCB2
LRRC37A3
MC1R
DROSHA
C5orf22
RASGRP2
CDC25C
DUSP4
TLX2
HHAT
MYT1L
BOD1L1
DDIT4
FAM120B
NMNAT1
LZIC
SRP9
ZBTB17
TMEM248
RGPD2
RGPD1
RPLP0
PPP2R5A
METTL26
FDPS
CENPA
PIM1
MAP2K1
SLC39A13
NOTCH2NLC
LIX1
PIP4P2
NUDT15
RBM27
H4C11
USP32