ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236746 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◣ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RWDD1
NUP85
EFTUD2
CCDC103
PSMD12
ZNF335
HADHB
HADHA
GOSR2
MRPS7
GGA3
SUDS3
RABL2B
POLR3F
DZANK1
RABL2A
TSN
NVL
RPS12
BLCAP
MAPKAPK5
CACTIN
PAK1IP1
C6orf52
RBBP5
POLR2E
RPS27A
CLHC1
VTI1B
SLC35B1
EXOSC5
BCKDHA
TSNAX
PNO1
REXO1
NME6
ZRANB2
NCLN
NUP205
ISCU
SART3
RABGGTB
DCTN1
LYRM4
FARS2
C17orf80
FAM104A
PSMD1
COX7A2L
VARS1
HSPA9
C19orf48
SELENOF
HS2ST1
PI4KB
PES1
SEC61B
ALG2
STAM
OAZ3
MRPL9
GOLGA5
RPL21
VDAC2
COMMD1
CCT4
IQCG
RPL35A
TMEM101
TMED1
UPF2
FARSB
XPNPEP3
ST13
TTC8
NDUFA4
PSMG2
CEP76
ATP5MG
SUPV3L1
TBCK
AIMP1
USP1
IRGQ
ZNF576
MRPS5
DYNC1LI2
BAG6
SMC2
ACTR10
UFM1
IPO13
CAPRIN1
ANAPC7
DPH6
SRD5A1
STAM2
PCBP1
RPS29
LRR1
PROSER1
NHLRC3
CD24
RPS23
ATP6AP1L
SUCLG1
DDX39B
PAF1
CDC73
EIF4ENIF1
GMEB2
ICE1
PDAP1
BUD31
ADK
AP3M1
STK36
RNF25
RBKS
BABAM2
TAF9
RAD17
AK6
MLEC
RPN1
C16orf91
PIN4
SKP1
UBE2I
RPS10-NUDT3
RPS10
OSGEP
APEX1
GORAB
NDUFA10
ZBTB18
BICRA
SEC11C
SF3B3
COG4
PTGES2
MRPL38
LIMA1
GTF3C4
DDX31
PCGF1
MRTO4
EMC1
ARHGAP11A-SCG5
ARHGAP11A
ZNF383
CCDC43
GADD45GIP1
KIAA0319
AXDND1
SNRPD2
QPCTL
APBA1
ALKBH5
NFATC4
TM9SF1
HSPA1B
LRRC43
UBAP2
RPS24
RPL7
RDH10
CBFA2T2
DUSP12
GLT8D1
SPCS1
MTRNR2L8
NHLH2
ANK3
GBA
PKN2
PAGR1
EYS
EIF4H
CHN1
SRSF11
LRRC40
NRXN1
CHD8
NELFA
WRAP53
EIF2S3
MYCN
RTBDN
PHOX2B
CNPY2
MICOS13
HSD11B1L
TCHP
RARA
MEPCE
ZCWPW1
CBX5
R3HCC1
TOMM20
CLTC
LEMD2
RBM25
CS
MAN2C1
ANKLE2
MLLT11
CDC42SE1
RUNDC3A
EBF3
GATAD2A
TBC1D16
CCDC40
DDX1
TNFRSF19
DGKZ
PTPN3
KRTAP3-3
SIRT4
HSPE1-MOB4
HSPE1
HSPD1
CLASP2
ARHGEF1
FAM162A
CCDC58
ACVR1
CBX3
HNRNPA2B1
TCF4
YTHDF2
RRM2
ELAVL4
MAD2L1BP
TIMM10
ZNF521
MTMR14
DYRK1B
RUNX1T1
CMTR1
SLC24A1
INTS14
CLVS1
IDUA
VMP1
PTRH2
TANC1
MTF2
GSTP1
DBNDD1
PDHX
APIP
GGA1
LTBP4
CIPC
SLC26A11
SGSH
TMEM210
MLF2
IL6ST
CNNM2
VPS50
HEPACAM2
ACTA2
UFSP2
MARCHF7
COX7A2
ZCCHC4
GOLGA8Q
EFCAB2
ATG101
PAXBP1
TCP1
MRPL18
PPP6R1
TMEM38A
SMIM7
SMARCD2
NCAPG
DHX8
PCBP2
ATF7IP
RPS7
SECISBP2L
SCAF8
CYTH3
CCDC174
DDIT3
TSPAN11
MTRNR2L2
UROD
HECTD3
SMAD7
MFAP4
PANK2
BRD4
ARL14EP
APLP1
USP9X
C1orf194
ZNF331
ARIH1
FYN
ZNF121
GOLGA8R
PLEKHA6
SF3B2
CYB561D1
TXNDC11
ETAA1
FAM110A
HEXIM2
KDM3A
MRPL12
UQCRC2
KIAA1217
CASK
SORBS2
POLR1H
ZNF496
BRWD1
KCNT2
STAT3
PRPF3
TMEM244
USP32
NCBP3
ZFP36L1
TMEM127
CIAO1
TIAM2
IRAK1BP1
QPRT
PARP2
BROX
AIDA
SERTAD3
BMF
PDGFRA
PRKCSH
CCDC151
RAD51D
CSRNP3
ZNF608
PAN2
MDC1
IGF2BP3
TNPO2
MYT1L
MGP
CALM2
RPS26
COPS4
DUS1L
ZNF787
NKIRAS2
DNAJC7
SLC25A25
FKBP5
SLC25A28
PRDM10
SPHK2
RPL18
RPL26
RARB
HMGB1
USPL1
CALR
ZSCAN12
ZBTB26
NME1-NME2
NME1
WDR74
TLN1
CREB3
ELF1
WBP4
DRAP1
C11orf68
CDC42EP2
PRR14
NUCKS1
TMEM259
FAM222B
RUNDC1
PTGES3L-AARSD1
PTGES3L
EBF1
RAD52
CTBP2
RNASEH2A
BAZ2A
PCBD2
ZNF397
ACTB
KIAA1191
SOX11
B3GALT2
RBMS3
PDE12
ZNF76
PRPF6
ADRM1
NCAM1
UBB
SMIM18
POLDIP3
TMEM60
PHTF2
UBE2Z
TBPL1
NEURL2
CTSA
MAP3K3
MRPS23
FNTA
RAB30
LMAN2
FBXW7
H4C12
ALMS1
RBM4
PLSCR5
TMBIM4
PRPF8
TLX2
RCOR1
PARP9
DTX3L
TRAP1
CDKN2AIPNL
PRPSAP1
RBM6
OGFR
TMEM205
CCDC159
ZNF629
CEP170
SDCCAG8
HNMT
COPS7A
RPS27L
OAZ1
ZDHHC4
C6orf89
SH2B1
POLG
MFSD11
SRSF2
PKM
EIF4A3
NAP1L1
CDIPT
GTF3C5
HCFC2
GLT8D2
PRKAG2
CHD9
H1-10
RPL27
C12orf57
RPAIN
NUP88
C18orf25
KRTAP10-5
NREP
MCC
MCL1
CLIC4
DNAL4
WDPCP
MDH1
HNRNPD
GAA
ID1
SDE2
TP53BP1
TMEM94
PTPN13
FBXO22
MMP20
EIF1AD
BANF1
SDHAF4
DDX23
SLC16A3
DCLRE1B
AP4B1
SEZ6L2
ASPHD1
RACK1
AFAP1
LNPEP
SRP9
EFNB1
PMEPA1
SLA
SLC25A6
SFXN2
ARL3
NEUROG2
ZGPAT
ARFRP1
NEUROG3
HES1
SKIL
SPATC1L
VEZT
FGD6
FLOT1
SP2
PMAIP1
HOXA4
NDUFS7
NEUROG1
ATOH1
DHRS3
KAT6B
BNIP3
BBS9
GPR108
IGFBP2
TTI2
ZNF746
HOXA2
DNM2
TPRA1
ID2
P4HB
TEPSIN
NDUFAF8
MINDY2
NPAS4
CCNDBP1
TBX2
CLGN
RAB5B
KANSL3
STX18
ZFHX3
DONSON
DOLPP1
CAMTA1
PDHB
SP5
ATF6
TLE4
ANK2
OTUD7B
UPF3A
RBPJ
KATNB1
FRA10AC1
ZNF687
PGK1
HUS1
RFX1
XKR7
PRUNE2
DUSP6
MTMR4
GATA4
FOXP1
NRL
DPP9
TBX3
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
KIF21B
ARRDC4
ST18
PDE4D
NFKBIA
ARSG
TLE2
HOXA3
IQSEC3
RMND5A
DCAF11
SP1
NR2F1
RARG
PCNA
OSBP
PPCDC
ZFHX4
MRPL34
INSM1
STIP1
RNF207
SOD2
ATP5F1B
SLC45A4
MDM2
LPCAT3
KMT5A
KAZALD1
MACROH2A1
GPCPD1
MALRD1
SMIM20
CRLS1
EVI5L
GRSF1
EIF2AK3
PPP6R3
METTL11B
GADD45G
TMEM70
KCNAB2
KNL1
DAGLB
SHF
MYRIP
ANKRD28
FBXO31
SACM1L
SMG6
PRMT5
RBBP7
EIF3D
SLC30A4
DIABLO
SREBF1
NLK
RAB37
COX5A
ZNF503
RHBDD1
RTN4
SERPINE1
CEP41
SERPINB1
NKD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF10L
NCOA2
G3BP1
EFEMP2
CDS2
USP42
ARID4A
DUSP9
ILF2
PNKD
TDRKH
HTR5A
AIFM2
TRIB1
SEC14L1
HIBADH
WTAP
LUC7L2
PRKACA
ARHGAP4
MBD2
KMT2A
ROGDI
NRSN2
NR2C1
BFSP1
TOP2A
TCTEX1D4
BTBD19
TIGD1
EIF4E2
CPSF4L
HMGCS1
IQGAP2
RNF149
NEDD9
SH3BP2
IRF9
PIKFYVE
FAM107B
ING1
GOT1
TBL1X
INAFM2
RASSF2
LRCH4
FBXO24
EIF1B
HES3
BHLHE40
CCDC88A
TUBGCP3
ANKS4B
NANP
B4GAT1
CYB5R4
LCK
ACYP1
MAF1
SCAP
ADM
CMSS1
GFOD1
EPM2A
EXOSC4
STX16
CASC3
TSPAN4
TUBB4B
HPCAL1
LBX2
FAAP24
CEP89
POLR3E
ICAM1
PCTP
PARK7
SEPTIN9
PRDM12
ANP32E
DLC1
DCAF7
CELSR3
MPND
ADAP1
NEO1
HSP90B1
ZC2HC1C
HOXB4
LTBR
UBE2C
SRCAP
LOC730183
GPATCH8
IRS1
HNRNPC
TANK
TRAF4
ATP23
MPV17L2
SLC25A19
CDC42EP3
ABHD2
ARNTL
SHB
CLK1
CLCN3
CCDC59
MVD
CYCS
LPIN1
ZNF148
HECTD4
ZCCHC3
SNX3
NCBP2AS2
NCBP2
MTRF1L
YARS1
S100PBP
HOXC5
LRRC59
CCDC107
DNAJB1
POLR2J3
KIAA0319L
TMPPE
GLB1
HNRNPUL1
SERPINB9
ZNF740
CSAD
TCERG1
GGT1
ARIH2
KPNB1
FMC1-LUC7L2
FMC1
PEX14
CSRNP1
NKIRAS1
C8orf37
GLRX5
NFE2
ARHGAP24
FILIP1L
KHSRP
NAT8
WBP1L
BAZ1B
JUP
FAM227B
DTWD1
STARD4
NRSN1
LIN28A
GATD3B
GATD3A
CIC
ETV4
MYADM
DSCAML1
NBPF1
MSMO1
ATXN1L
ELOVL6
RSRC1
NCOA7
FBXO41
CCNL1
POLR3A
RAI14
CCPG1
C15orf65
VOPP1
LAPTM5
RAB11A
MBD6
ARID5A
TRIP4
DCP1A
NUF2
PXMP4
MFSD6
CEBPE
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
SKIV2L
NELFE
DYNLT1
PSMD9
HPD
HINT2
TOMM40
MEF2C
USP3
ACTL6A
TMEM9
SPIN1
L1CAM
CPVL
RGS12
SLC7A5
PSMD3
MANF
HOXC6
HEBP2
MRPL4
HBP1
RASSF5
LONRF3
SKA2
PRR11
C3
OTUD4
CDCA7L
GFRA3
REC8
GLRA1
HMGN4
LZTFL1
TMEM86A
SLCO4C1
ADAM17
GTF2H2C_2
GSTA4
EEF1AKNMT
TOP2B
PKDCC
TRIM44
HSPA5
AK2
TBRG4
RBM15
BOLA2
BHLHA15
RAD50
LOC100289561
HOXC4
ARMC1
HNRNPL
AP3M2
CNPY3
PGP
C16orf54
CLDN2
LDLR
RPS6KA1
MAP11
MFN2
CHN2
KDM1A
NR1D2
PEX3
CPLX2
ADAT2
STK38
AOPEP
NBN
TIGD2
OPA1
PSMF1
CABIN1
C1RL
BAIAP2
H6PD
DYNLL1
STT3A
IARS1
ERRFI1
C11orf24
PXYLP1
PTGES3
CYBA
TXNRD1
DIAPH1
YIF1A
BRD2
SPSB3
PARL
H4C8
KEAP1
SNRPF
NCDN
POR
H2AZ2
ZNF292
SPECC1
KMT5C
BOLA2-SMG1P6
BIN2
USP15
IQCH
AAGAB
AKIRIN1
RPS6KB2
IBTK
PWWP2A
GTF2H2
RFESD
GBE1
SLC11A2
CYP1A1
RNASEH1
KAT6A
ZBTB45
E2F3
SERTAD2
NADK
NBEAL2
H4C15
H4C14
MAPKAPK3
CISH
TBC1D8
TMCO6
ADGRG3
DENND4B
SEMA5B
MFSD8
ITFG2
ABHD18
AKAP1
MED9
CDKN2D
MTHFD1L
CEP70
TLE3
PIWIL2
VIRMA
TMBIM6
GRHL3
SH3TC1
SEPTIN2
HDLBP
ACAT2
WDR25
WARS1
TMEM222
DIAPH3
LEKR1
CNOT1
SPAG7
NIBAN2
ZNF77
AGT
GTF2H2C
ZFYVE21
XRCC3
HESX1
PIK3AP1