ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402530 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◣ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

LDHD
TATDN2
BCR
PPIG
MBOAT4
KRBA1
SARS2
MRPS12
UBE2F
ZNF572
TMEM89
COL18A1
AADACL4
GORASP2
TXNRD2
SUMO3
LZTR1
LOC102724265
SLC1A7
KCNJ15
ZNF562
YTHDC2
C1orf167
CEP85
IL36A
MROH7
GRAMD4
ZNF32
THEM4
ZNF623
FRG2C
IRAK2
ENG
PRRT1B
DEGS2
ZNF761
MTRNR2L1
GCNT7
FAM209A
FAM184A
ADCY10
IGFALS
YY1AP1
DAP3
CTAG1B
CTAG1A
DBNDD2
ACYP2
MAP1LC3B2
ST20-MTHFS
SEC14L1
GSTM5
ZNF439
GPRC5C
IL21R
AUH
C2orf88
EXTL2
RBM33
HP
CORT
LUC7L2
FMC1-LUC7L2
FMC1
HSD17B6
FAAH
LEP
TM9SF4
ZNF341
PRIM2
PDCD7
APOBEC3B
PRSS38
MID1
CEP192
MON2
SLC27A5
ARHGAP39
MTRNR2L2
MSH3
DHFR
RNGTT
TRANK1
CCDC130
SNCG
MMRN2
NOS3
ZNF324B
ST6GALNAC6
VAPB
UBAP2L
C1orf43
ZNF577
LONRF2
CYP17A1
MRPL34
RNF215
MATK
MTREX
DHX29
SPDEF
LARP1
ZNF317
PDE2A
RBPJ
YPEL3
FEM1C
NUP210L
CACNG1
FAM25E
CCNT1
SPSB1
SNIP1
DNALI1
METTL6
EAF1
FRG2
DDX31
GTF3C4
RFC1
TTLL11
OPN1SW
SYT3
IFT88
POLR3GL
ANKRD34A
NUDT3
TNXB
C4B_2
C4B
NME4
LOC110384692
C4A
ADI1
DUX4
MTRNR2L8
GLO1
RIC8B
POLR2E
GPX4
IGSF3
OR4K17
SAP130
FAM234A
STAU1
LRRC20
PCP4L1
GALNT2
TMEM44
CD14
BANP
RARRES1
TMEM42
CATIP
CCR6
ANKFY1
METTL8
DCAF17
TTC38
PKDREJ
SPATA45
PLVAP
DEK
KDM1A
AFAP1L1
SLC25A12
KIR3DL3
KIR2DS5
KIR2DS3
JAGN1
KDM3A
MSMO1
SEM1
ZFP69
SLC35E2A
SAMD1
CEP72
KRTAP10-9
POLE4
PRELID3B
WRN
RBM28
KLF3
ACOX3
TRMT44
SAE1
GRM4
TOE1
MUTYH
MACROD1
PPP5D1
CALM3
ZNFX1
ZNF438
AIFM2
TMEM62
GPD1L
ADAR
ST6GALNAC1
CSAD
ZNF740
MMEL1
ZMYM6
GTDC1
POM121L2
HDLBP
FAM89A
ZSCAN31
YJU2
SFTA2
FAM20B
H4C8
TMEM229B
LIMD1
RPS7
LCN8
UBLCP1
PRRC1
AGGF1
ANKS6
HSD17B4
ZFP1
TEDDM1
PAXX
ZNF683
GALNT1
HTR3E
SSH1
FAM227B
DTWD1
ESR2
EFCAB10
FAM153B
PHACTR2
HARS2
HARS1
UFSP2
C4orf47
NDUFS4
PRKCZ
BSDC1
KLF18
ACTL8
SCCPDH
TOP3B
GDPD5
PPM1B
TLR2
LRRC61
ACTR3C
GOLGA5
FBXO17
CFAP157
TMEM14C
VPS37D
TNK1
ZNF772
TRIM25
TIGD2
CD47
NDUFA8
MORN5
C19orf18
ARHGAP19
DHRS4
SLC35E2B
ADTRP
C1orf159
MAPK1
APOL4
PDE7A
EPS15L1
LRRC59
AUNIP
EPO
SAR1A
MDK
UGCG
SLC2A7
NDUFA12
OR2W3
SGMS2
LMBR1L
DNAJC14
FLYWCH2
RSRC1
CNOT11
ZNF211
HEATR4
MSL2
DNAH8
CNGA1
PACSIN1
ZNF426
MTRF1L
FOXN1
FN3K
TLCD4
RSL24D1
TTBK1
FAT1
PARP15
DGKH
RSAD2
AGPAT3
EPHX2
F2
C2
TP53BP2
FBXL12
ELOVL2
KRTAP7-1
IQSEC1
TEX101
CAV2
ZFYVE28
ACAA2
LRRC34
HDAC9
JMJD1C
REEP3
NDUFS7
CLEC4M
HERPUD2
ZNF398
ZNF425
PRAME
RNF217
FGGY
SAMD4A
RTCA
CCDC181
RAB40B
MPP3
PPDPF
SLCO1A2
ZNF546
DHCR7
ANP32D
PPARGC1B
PTGS1
CPA1
PFKFB3
DHX32
STRIT1
PDRG1
LAT
SCFD1
CLDN16
DNAJB13
CCDC166
TMPRSS9
KMT2A
PSEN1
HACL1
BTD
LOC388813
USP2
BAIAP3
TACC2
C22orf39
BBS12
ANKRD54
EIF3L
CRY1
EIF4E
NOD2
OR2AP1
CALCB
TRIM38
TTYH2
ELAVL3
AMZ1
ERICH4
SMYD3
CYP27A1
BRWD1
AIG1
L2HGDH
DMAC2L
KLRC1
ZNF114
FABP6
RABGAP1
LGR5
EFCAB13
SLC41A3
GPAM
DGCR6L
CHD7
CDCP1
DPY19L4
MRPL40
HIRA
SELP
SCLY
ZNF816-ZNF321P
ZNF816
AIPL1
ZFAND2B
BAAT
C1orf158
ALDH3B1
KLF16
OSBPL8
PAK1IP1
C6orf52
CLK4
CYP51A1
HOXC5
HOXC6
ZNF57
GART
ZNF669
ZBTB38
BLM
ERGIC2
MSRA
LSS
MCC
PARP1
HIF3A
TEPP
CNGB1
REXO4
ADAMTS13
UGDH
ING5
UBE2L3
PRSS22
LACTB
DDX19B
KCP
ELFN1
FAM83G
TTLL10
MTF2
DMAP1
IAH1
LOC100129484
ZBTB40
PSMB4
YPEL1
CEACAM21
RABGEF1
RSU1
FANCI
ZNF583
CT45A10
DBN1
SAGE1
C18orf63
DHRS13
HPCAL1
ADA
TTC17
RAD21
FLOT2
RBBP5
SPA17
SIAE
TUBB6
TMEM70
ELOC
IL36RN
IL36B
RIPK1
SLC17A9
TAOK3
P2RX6
CDIP1
KPNA7
ZSWIM7
TTC19
ZNF20
AARS1
ADD1
CUL2
TMBIM1
FANCL
HIVEP1
BCL7A
ANKRD33
MED23
GGTA1
LCE3A
LCE3B
RNF126
CCDC9
ANAPC7
PALM
COL23A1
TMED1
FBXO8
CEP44
SYDE1
CYTH4
KRTAP10-8
GSDMD
JDP2
TMEM9
DCAF10
ADAP1
GSC2
TLNRD1
CEP164
ERAL1
ZNF83
BACE1
ACSM2B
REN
HIP1
KRTAP10-10
C3orf20
GINS1
TEX10
TCP11L1
SPC24
ZNF691
MPHOSPH8
NME7
BLZF1
H3-3A
OR10A3
ARSH
KAT6A
NNT
TOMM5
PPM1F
GTPBP6
SLC35G5
GATAD1
RBCK1
N4BP3
RAB11FIP1
SUPT6H
SDF2
CANT1
CASP10
PIKFYVE
CLPB
SLC7A10
CDYL
TMPRSS12
B3GNT2
HTRA2
DQX1
TRMO
ASS1
STX16
PNPLA7
SCGB1C2
CD84
INMT
TCAF2
EPS15
TRIM17
H3-4
TMEM43
CHCHD4
EMP3
CD69
MNDA
ZNF337
KANSL3
FER1L5
SH3BP2
ABAT
DHRS2
ZNF397
AGPAT5
NT5M
NUDT9
PIGZ
LIMS1
GNL3L
RPL26L1
NT5DC1
FOXN2
ZNF134
ZNF550
PRPF3
ZNF706
HPS1
ERICH2
SEL1L
CCDC91
CHORDC1
ERVW-1
ZNF780B
THAP4
ATG4B
BPIFA2
SUGCT
MPLKIP
TIPARP
GGA2
TMEM222
NLRP6
ZNF792
MTOR
CLTB
CCAR2
C8orf58
EEF2K
BMF
LRP5
EPM2A
CBX1
VAC14
CCDC120
OR8B4
HLA-E
OXA1L
IL4R
SSBP1
CBR1
ZC3H10
RPL41
LGALS8
C4orf48
TRPM2
FAM170B
PIK3R1
ZBTB6
CHCHD2
MSLN
ZNRF4
SH3GL1
CHAF1A
PAK2
CCDC112
TPST2
CFAP70
COX7B
CRISP1
SATB1
ZMPSTE24
NUP214
USP48
MCM9
DNAH14
C2orf73
PLEKHH2
TMEM244
ATP1A1
PIGW
MYO19
KDM7A
MTX2
RLN3
RAB11B
SLC2A10
NARF
CYBC1
CCNI
RPAP1
ERAS
ZNF845
TMEM41A
RNF141
AVPR1B
MAD1L1
PGAM5
ZNF117
THAP11
NUTF2
CENPT
C1RL
MITF
RFX5
KRTAP10-5
AURKAIP1
C1QTNF6
ZNF610
TSACC
CCT3
CAB39L
POU2F1
ATP23
FAM136A
RSL1D1
TMEM205
CCDC159
ASCC2
RAB3D
AOPEP
FSIP1
SMCO1
RPS14
GASK1A
COIL
FBXO21
CCR7
FBRSL1
CYP3A43
BMS1
GTF3C5
SLC45A4
CD248
BIN3
DPF2
RHOXF2B
RHOXF2
KRTAP10-12
PAFAH2
SERPINB1
SLC2A9
SLC25A24
ZFAND1
HSFX4
SMARCD2
RNF38
TTC3
DOCK2
MSANTD3
PIGP
GNPDA1
DNAJB12
CRKL
SCGB1C1
FAM172A
NDUFC1
NAA15
CD5
MSH2
BRPF3
NPAS4
SPRYD4
MFN1
LY6G6F-LY6G6D
LY6G6F
ABHD16A
PACS1
BCL9L
BCOR
ADPRS
TEKT2
TCFL5
COMMD5
RBM27
SPSB3
GPR157
KLRD1
USP30
GCNT1
ZKSCAN2
RGS3
TAS2R19
INTS12
GSTCD
CAT
KDM3B
NOA1
LEO1
SLC35B2
COX10
SYNCRIP
SRL
TFDP2
ZNF560
NIBAN3
C1QTNF8
SRI
NDUFA6
CACYBP
EVL
HPSE
LY6H
RCOR3
TMEM242
ZBTB45
DUS1L
ERMAP
SVBP
PRRT1
CPQ
PEBP1
SDR42E1
YBEY
MCM3AP
RANBP17
MFSD6
PKMYT1
PAK4
ZNF296
GEMIN7
MIS18BP1
LSR
RNF168
GTF2A2
GBA
PDCD6IP
C4orf3
STARD9
LMLN2
KMT2D
GYPC
FAM104B
SMIM34A
PDE6G
SUN5
BPIFB2
LOC105376731
DCT
BRI3BP
DHX37
GAS6
HSFX3
MRPL16
TPM1
KNL1
ZNF133
DRG2
TLR1
KDM4E
AGK
KLHL12
KIF3B
TMC5
PCK1
NUF2
SREBF2
UPF1
ALKBH3
FAM98B
PPARG
TFF2
INO80C
CELF1
HLCS
TJP3
ADCK5
PTPMT1
PROCA1
SCAND1
METTL26
LRG1
ZNF391
DPP9
CSNK2A1
SLC12A9
EPHB4
ZNF839
SLC22A1
KATNB1
CLPS
ITGB3BP
EFCAB7
ACOT7
SWAP70
COASY
DNPEP
DST
BEND6
CDK5RAP1
CFLAR
MIB1
PPP6R3
MICOS10-NBL1
MICOS10
PROC
FHL3
GSTA4
RANBP1
TRMT2A
WDR4
PEX3
ADAT2
CCDC115
CCDC116
ZNF766
TMEM239
C20orf141
SMG8
CTNNB1
ZNF473
VRK3
IQCB1
EAF2
BAZ1B
KRTAP10-11
WDR70
MRPS36
TRIM52
IFT140
CRAMP1
NEUROG1
THAP6
N4BP2L2
WDR25
WARS1
PHF21A
ATXN7L2
ZFP41
FCGR1A
SLC29A2
B4GALT7
CDK11A
TMEM65
DHX33
SIRT5
MRPS18A
AARS2
MRTO4
EMC1
NR2C2AP
SLC6A8
PNCK
ANPEP
TBX10
TAS2R13
ERICH3
ATG101
CEP41
PSMG2
CEP76
KLHL20
TOR1A
SLC25A48
TRAF3IP1
ZNF442
DUSP6
PDE11A
APOA1
TBX6
PAXBP1
BCAR3
SAMD4B
SF3A3
PUM1
CNOT3
NME1-NME2
NME1
COX16
DCP1A
RPS29
YWHAQ
TTLL12
RAB37
EIF2D
RPL27
SULT1C3
RABGAP1L
PLEC
NDUFB3
FAM126B
FRA10AC1
MRPL44
GDPGP1
CIB1
TTC32
HMGB1
CALD1
DSTYK
TBC1D19
MAPRE2
SELENOH
USPL1
GTF2H2C_2
ZFP30
CFHR4
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
POLR2J3
STX18
GTF2H2C
RPL37
DNAJC25-GNG10
DNAJC25
COMMD2
SLC33A1
ZNF561
POLR3B
TOR1AIP2
TOR1AIP1
RBBP9
TFPT
PRPF31
RERE
ZNF408
ARHGAP1
MRPS31
TATDN3
NSL1
UTP3
PPIP5K2
LIPA
GIN1
CCDC59
ALG10B
NSFL1C
IPO4
RAD54L2
SLC44A1
FRG1