ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220466 | HT-29
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◣ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

PLEC
DBNDD2
DUSP6
GCNT3
MMP7
THEM4
EPS8L1
RDH13
SEC14L5
IST1
GDPGP1
CIB1
CTAG1B
CTAG1A
CEP72
SGCE
PEG10
SCARF1
RILP
CBX1
TTC13
ATP1A1
KCNJ15
EXTL2
DMPK
CLDN16
PTHLH
BMT2
SDCCAG8
CEP170
FKBP2
LOC114841035
VEGFB
MICALL2
NDUFB3
FAM126B
RHOV
BCAR3
SDR42E1
KRBA1
LCN2
SARS2
MRPS12
RNF187
ZNF562
LIPA
SUSD1
ST6GALNAC6
MIGA1
LAT2
ZNF341
ALDH3A1
SLC12A7
SEM1
PDE11A
SLC45A4
HOXA3
OTUD7A
PER1
TMEM70
ELOC
PUM1
ZNF609
GINS1
CUEDC1
LAMA5
OSBPL3
TBC1D22A
SLC41A3
NDFIP1
PI4K2A
FMN1
PDXDC1
MUC5AC
EPHB3
FAAH
MAML1
PRELID3B
SOCS5
IFT88
TPM1
ANXA2R
FRG2C
TLNRD1
KLF4
PRMT1
SLC25A26
CEBPB
SPAAR
LGR5
HRCT1
SP4
INTS1
FAM83A
ZPBP2
IKZF3
RXRA
SFT2D3
TSC22D2
SRF
SDC4
NAA20
PCP4L1
ADD3
EPB41L4B
ST6GALNAC4
CLK4
KRT8
RFC1
MBOAT4
SAMD4B
GOLIM4
BSDC1
RERE
P2RY4
SH2D3C
ID1
ZNFX1
WWTR1
KLK6
ERCC1
CCN5
TLR2
DUSP22
TBX10
RABGAP1
IL18
TEX12
BAIAP2
NRBP2
PRKAR1B
PPP5C
MYH9
BHLHE40
TOX2
PRKD2
RAB30
RABGAP1L
ITGA3
MKNK1
FBXO32
IL4
MTMR6
RBBP9
COMT
ABL1
ECE1
WDR74
NBL1
ZNF233
NOS3
HERPUD2
SH3BP4
JMJD1C
REEP3
YKT6
RNF13
PLA2G10
PSRC1
DEGS2
ZNF761
YTHDC2
NBN
GRPEL1
MST1L
UBE2F
KIAA1841
CD47
ZNF211
HLA-DMA
KLK11
MRGPRF
MAPRE2
PNPLA7
TEX9
RFX7
OR9A4
TMEM41A
GPD1L
ZNF226
DYNC1LI2
CREB3L1
YTHDF1
POF1B
COL23A1
SIPA1
YES1
VIL1
ANKRD22
MEX3C
TPSB2
TPSG1
MAEA
PNRC2
CALD1
TMEM59
TOLLIP
ZHX1-C8orf76
ZHX1
TRAM2
ZNF28
PIGW
MYO19
GUK1
GJC2
MLLT6
WDR43
COL18A1
LXN
OTUB2
TET3
TMEM44
DAB1
OMA1
CEBPG
TXNRD2
ZFP91
LPXN
RAVER2
CCDC130
CLDN4
CAMK2D
GOLPH3L
PCNX3
MAP3K11
ARHGEF2
MTIF3
FBXL22
TRIM29
ADAMTS7
LSR
PIK3R1
TIGD2
ABCC3
TEX52
VDR
RND3
PRRC1
RHOQ
ATP6V1E2
TNNI2
SYT8
BCL3
ECI1
ADAM8
H4C8
LAMA3
FRG2
ACYP2
IRF2BP2
NT5DC1
FBXO44
FBXO2
ATP2C2
TWF2
TRIB1
GCGR
FUT2
MEIS2
SGPP2
HMGA1
CLCN5
ASS1
BANP
NPAS4
CIZ1
MRPL45
RAD51D
FNDC8
ZBTB49
LYAR
SEC14L1
BCL6
SAMD12
PPP1R9A
PPP6R1
C3orf14
SH2D6
PELATON
LFNG
CYRIB
SH3BGRL2
P3H4
FKBP10
NKAIN4
OGFOD1
NUDT21
STPG1
NIPAL3
HNRNPD
LDLRAD2
ZZZ3
ITPR3
CEACAM5
HEXIM1
BIRC3
NPFF
RPL24
RGL3
FGFRL1
MATK
SPINT2
UGCG
NDRG1
NME4
SLC25A51
CHD1L
RAB26
GPRC5C
SPACA6
PAAF1
COA4
TMEM89
IFI44
VWA7
DGKZ
BCL9L
FGFBP3
RHEX
WAC
BICDL2
ZNF280D
TARS1
CATSPERG
ZNF385A
HIBADH
LRRD1
SH3BP2
ZBTB7C
ARHGEF39
CA9
NKPD1
LUC7L2
FMC1-LUC7L2
FMC1
GASK1A
HNRNPH1
LOC101927572
ALKBH6
C1QTNF9
OR5AK2
SSR3
ACTN4
SEC23B
RUFY1
GCNT7
FAM209A
NOTCH2NLC
GDPD5
ANO10
IMPA2
ARHGEF1
CORT
STYK1
CCDC183
RNF39
MTBP
MRPL13
PIP4P2
BCAS1
CRLF1
TMEM59L
ZNF317
CATIP
RAB1A
NUAK2
QRICH1
ZCRB1
PPHLN1
EHD4
VWA1
TCERG1
SLC1A5
MSMO1
ATF3
DHDH
PIK3C2B
BCAR1
MPZL2
IGFBP1
INTS5
METTL8
DCAF17
ZSCAN25
WDFY2
OSBP
SDR16C5
TUFT1
LAD1
YPEL3
ZNF326
RNF103-CHMP3
RMND5A
ARL6
TMEM150B
HMGB1
USPL1
HES3
LHX4
RND1
RPS7
PGAP2
MANF
ERAP1
PPP1R8
SEMA4B
LRP5
CMPK2
ZNF805
RAPGEFL1
TTC4
UBLCP1
PPA1
ADCY4
ZNF112
PLPPR2
RIPK3
AMD1
CDK19
ELK1
COQ2
CSAD
ZNF740
RGL2
PMEPA1
ZNF292
MSL2
HIP1
PIGF
CRIPT
ZNF652
RAB22A
SPTSSB
ZNF44
TBCE
RNF144A
LRRC66
SCAF11
STX1A
COMMD4
KRT15
FAM153B
ANK3
MYRF
TEX44
ABCC10
SERBP1
FAM50A
FAM227B
DTWD1
KLK12
ZC3H10
RPL41
TATDN1
NDUFB9
GJB2
ATP13A2
ROPN1
METTL21C
TMPRSS4
SLC29A2
LNPEP
PCTP
SYT3
DCTN4
PLD1
KCNQ1
TATDN2
RNFT1
PDIA2
RGS11
ARHGDIG
INPP5A
RINL
MICAL3
ADPRHL1
CAPNS1
ATAD2
NOL11
CYP27A1
AGBL2
NABP1
DUX4
LPIN1
VAPB
LCE3A
SHOC2
BBIP1
TIMM23
LCE3B
CD82
ALG1L
RBBP5
SMARCD2
YARS2
OGDH
PCDH1
TACC2
MBNL2
C17orf50
ARHGDIB
CEACAM19
SAE1
PPME1
C2CD3
WNT2B
TEF
GPR39
MRPL44
EGR2
HSD17B12
KRTAP10-8
RARG
MAP3K3
SNAP47
ING2
CBFA2T2
ENG
ORC4
MBD5
NUDT7
KDSR
TCEAL1
SLC30A6
GPR37
TTBK2
MOCS1
PTGES
SERHL2
TMTC2
FBXO46
MYEOV
MEIOSIN
RAB11FIP5
ANGPTL4
RPL27
MMEL1
TMEM179B
HOXB3
HOXB5
SLC9A3
WNT9A
CCDC150
RAB6D
BRPF1
HBP1
PPP2R3A
IRAK2
TMEM229B
THAP11
NUTF2
CENPT
GRPEL2
IAH1
STK40
PLD3
C19orf47
VEGFA
EHF
TBR1
PRR15L
SLC35A3
ZNF670
BMF
SGMS1
GZF1
SETSIP
BTBD8
PSMB8
PBX1
HACL1
BTD
TMEM42
MARCHF9
CDK4
COL14A1
ZNF628
ETHE1
ERVW-1
DIRAS2
USH1C
OTOG
STAU1
VIRMA
DDX27
SLC25A40
DBF4
TP53I3
PDE5A
HEBP1
HSD17B2
KLRD1
JADE1
PRPSAP2
INF2
ADNP
USP48
SNUPN
COX19
LRCH1
LTBP4
ITGB4
MTNR1A
ZCCHC4
TES
ATP5MPL
TEPP
CNGB1
METAP1
TPP1
CMTM4
LOXL4
CRYBG2
CTNNB1
MYCBP2
PDE2A
GTPBP6
MTF2
VRK2
MTPN
LUZP6
NOXO1
GFER
MED30
HOXA9
HOXA10
ALG10
SNX18
OGA
PTK6
NUF2
EIF2D
POLE4
MAPK1IP1L
SMIM12
RBM7
C11orf71
PHF12
PDK3
PCF11
FZD4
SLC5A1
ANKK1
PIK3R3
ZNF587B
TSPAN1
P3R3URF-PIK3R3
P3R3URF
SNCG
MMRN2
COMMD2
DCP1B
IBA57
JOSD2
ASPDH
APC
PSENEN
LIN37
GALNT5
MXD3
WASHC5
NSMCE2
STAG2
GORASP2
SSBP1
SF3A3
MEGF8
LINGO1
LEPR
PLEKHB1
LEPROT
TRIM3
MOB2
CRKL
EVPL
TAF10
PARP16
ZFYVE28
GPBP1
CCDC166
SYNPO
CFAP99
RSL24D1
TMEM216
MECR
AMER1
FAM110A
RP9
SPON1
HYAL1
UBE2D3
CEP41
SLC37A2
TXNL4B
DHX38
IKBKE
DOCK1
TMEM92
LRRC20
TSPAN14
HIBCH
ZNF234
ZNHIT2
FAU
TMA7
CCDC51
ODF3L1
FGF19
SEMA3E
GBA
DNAJC25-GNG10
DNAJC25
TRMT5
SLC38A6
WDR5B
TTC39A
CPNE5
SSH3
C5orf60
ZMPSTE24
SLC24A1
INTS14
SDCBP2
RPS6KA1
GCA
GPR89B
RASA3
DOCK6
FMR1
RAD50
HIKESHI
TNFRSF11B
COLEC10
TRAM1
LIMK1
TAF1A
ZMYM2
TGFB1
ATP6V0A4
BGLAP
PLEKHG6
STRADA
ACTR3
NCEH1
RAC2
ARHGAP24
LRATD2
SH3YL1
ACP1
PARP15
EPS8
CREM
PYROXD2
PNPLA8
RASGEF1B
INSC
MYLK2
SESN1
MAGOH
CEP57L1
PPP2R5B
PTGES2
RPL13
NUDT19
TARS3
TNFAIP8
RPSA
MARK2
C11orf80
METTL21A
KIF21B
SAMD14
FBXL18
TSKU
THEMIS2
TTYH3
CDCP2
TMEM43
CHCHD4
TIPARP
RTN4
GLIPR1L1
CAPS2
CCR7
KIF11
ROM1
EML3
IL15RA
E2F6
NCK1
TESK2
TNFRSF11A
AP3S2
CASP3
ARL4A
TBC1D23
CEP250
GDF5
PHLDB2
SCYL2
DEPDC4
ENKUR
LIPE
PROCR
DSTYK
PFDN5
MYG1
MRPS28
CBR1
ABLIM1
MTHFD2L
PRMT3
CNTRL
NEGR1
RALGDS
LOC643802
KAAG1
DCDC2
RAP2A
PTCD3
POLR1A
SOD3
KRT2
YAP1
GSN
R3HDM4
C1orf56
AQP5
DHTKD1
ZNF219
EVL
KLHL7
TMEM140
ZNF572
GTF2H2
GTF2H2C
RHOT1
DIDO1
ELF1
WBP4
GID8
STARD4
CNP
SLC16A3
DNASE1L1
MRPL34
NMRAL1
HMOX2
MAD2L1BP
ABHD8
GTPBP2
DDA1
RBFOX2
UBXN6
CASZ1
TAS2R14
PPP1R11
FAM133B
RANBP1
TRMT2A
POMGNT1
SPAG4
KSR2
ZFAND1
TTC9C
HNRNPUL2
PPIP5K2
GIN1
THOC5
MRPL16
SGMS2
RNF144B
TMX4
UPK3A
INTS12
GSTCD
MAP3K14
SCYL3
HMOX1
DDX11
USP54
TBCEL-TECTA
TBCEL
S100A10
B2M
NCAPG
TFE3
TNNI3
LENG8
CTTNBP2NL
C2orf88
RPS14
GTDC1
IQCH
AAGAB
ZNF337
AHSG
RNF24
ZNF524
PRKCG
LRP5L
GALNT12
ZNF865
DENND3
TMEM265
TMEM65
SYPL1
FIS1
TMEM60
PHTF2
SLC4A2
CDK5
COA7
C19orf12
PGM1
RARA
B3GAT3
RAB11FIP4
SPICE1
IQCF1
KLHL30
GABPA
ATP5PF
RPS19
STAT1
DHPS
LYPLA2
METTL3
CTDSPL2
TMEM131L
F2RL1
SERPINA1
STX16
TPR
ODR4
MRGPRX3
SOCS6
TBX3
GPRC5A
AURKAIP1
UTP3
TUT1
OARD1
NFYA
AMHR2
ST20-MTHFS
SNRPE
C2CD5
CDC25C
SLC25A13
SAMHD1
TMEM229A
IL4I1
ACSS1
YWHAB
CCPG1
C15orf65
CA2
C11orf24
CYP3A5
SPATA12
SERINC2
ILDR1
CSF2
INSL4
FEM1C
MRPL3
OSGEPL1
UQCC1
IL1RAP
DUOXA1
RAB10
PRSS16
MESP1
ITGB3BP
EFCAB7
C17orf75
TCAF2
TSC22D4
NYAP1
NME3
MRPS34
EME2
PLAU
ATP1B1
INTS6L
CENPVL2
CENPVL1
MED4
TM9SF4
PSMD11
ZNF416
NIPA1
ZIK1
CRY2
ZNF155
DUOX1
CDYL
FAM13A
KIF20A