ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150543 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◣ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

LDHD
ZNF572
TATDN2
SUMO3
GORASP2
IL36A
AADACL4
C1orf167
RBM33
KRBA1
AQP10
THEM4
BCR
TMEM89
IL21R
FAM184A
IRAK2
ZNF32
TXNRD2
YPEL3
TBX6
ZNF623
DKKL1
DBNDD2
MROH7
COL18A1
YY1AP1
DAP3
LONRF2
SNCG
MMRN2
UBE2F
KCNJ15
MBOAT4
PRRT1B
MAP1LC3B2
TMEM44
PPIG
CEP85
POM121L2
GSTM5
AFAP1L1
MON2
H4C8
GCNT7
FAM209A
ZNFX1
ARHGAP39
ENG
ZNF263
MTRNR2L8
LEP
APOL4
IGFALS
ZNF562
SLC27A5
ZNF761
SLC1A7
ZNF317
TRIM32
ASTN2
ADCY10
RBPJ
GPRC5C
ADI1
FAAH
ST6GALNAC1
EXTL2
RTCA
BAAT
RNGTT
TDP2
ACOT13
NOS3
BSDC1
ZFP69
SARS2
MRPS12
TMEM62
MTRNR2L2
MSH3
DHFR
ZNF341
SYT3
CATSPERE
BCL7B
S100A5
S100A4
S100A3
MAMDC2
CDYL
TNXB
C4B_2
C4B
HERPUD2
EHHADH
OPN1SW
GAL3ST2
LCN8
CACNG1
GOLGA5
FEM1C
DLK2
CFAP43
LZTR1
OR4K17
ATXN2L
LOC102724265
SCCPDH
EFCAB10
ANKFY1
CTAG1B
CTAG1A
APOL1
LRRC61
ACTR3C
DEGS2
ZNF426
ZNF780B
CATIP
ADAR
AUH
ACAA2
ZNF577
PRSS38
GTPBP6
FBXO8
CEP44
IFT88
LOC110384692
C4A
ZSCAN31
GLO1
ZNF57
MSRA
AGGF1
C19orf18
HEATR4
ZNF683
RABGAP1
PAXX
KRTAP10-9
ELFN1
HYAL1
NDUFS4
HSD17B6
CYP17A1
FAM227B
DTWD1
ESR2
MATK
DGKH
KAT6A
SPSB1
PPP5D1
CALM3
BANP
AIFM2
ZNF438
GUCA1B
ZNF324B
SPATA45
PSEN1
PARP15
SPDEF
BCL7A
EPHX2
C2orf88
FN3K
KDM3A
ADA
APOBEC3B
GATAD1
RIC8B
ZNF669
SMIM31
ZNF439
EPS15L1
ST20-MTHFS
PDRG1
UBAP2L
C1orf43
C9orf153
TOP3B
PLVAP
TMEM35A
PDCD7
TRIM38
GTDC1
TRANK1
SLC35G5
ST6GALNAC6
GAS2L3
ZNF398
ZNF425
PDE7A
LARP1
CAB39L
SDR42E1
MAPK1
CCR7
C1orf158
WDR74
TMEM42
NDUFA8
MORN5
PPARGC1B
CDCP1
LRRC34
OSBPL8
DEK
CUL2
SNIP1
DNALI1
L2HGDH
DMAC2L
TLCD4
FAT1
SAMD1
LY6H
REN
SWAP70
ACOX3
TRMT44
FAM25E
C1orf159
AADAC
POLR2E
GPX4
POLE4
PRIM2
TMEM9
TLR2
VAPB
PTGS1
RSAD2
ACYP2
ERAL1
ANP32D
CCDC130
SLC35E2A
NUDT9
HDLBP
NME4
TMEM107
ZNF211
RBBP5
TIGD2
MRPL34
ABHD8
HDAC9
JAGN1
ASS1
ACSM2B
SRI
DDX19B
TAAR9
SEL1L
CPA1
MID1
OXA1L
COL23A1
APOL3
SEM1
SEC14L1
CNOT11
ZMYM6
CEACAM21
SSH1
CEP72
PAFAH2
HTR3E
TNK1
CCDC181
ACTL8
GRM4
OR2W3
SMCO1
PDE6G
PACS1
LUC7L2
SPAAR
ZFP1
AACS
FBXO17
TMPRSS12
SOAT2
RBM28
ZNF816-ZNF321P
ZNF816
PCP4L1
RNF217
FRG2
CD200R1L
NUP210L
EPO
HSFX4
ASMTL
ZC3H10
RPL41
UBLCP1
GPAM
FANCL
YTHDC2
C1RL
ZNF335
PTPRF
SAR1A
WRN
RSL24D1
FMC1-LUC7L2
FMC1
ADAP1
INSL6
CRYAA2
CRYAA
FOXN2
MRPL40
HIRA
PDE2A
RAB40B
FRG2C
DUX4
MTRNR2L1
DUSP6
ITGB3BP
EFCAB7
FAM153B
GBA
PDE11A
TMEM229B
CBX1
APOA1
NUF2
PAXBP1
MTF2
RPS7
BCAR3
SSBP1
DMAP1
AURKAIP1
SAMD4B
SF3A3
PUM1
STX16
RFC1
CNOT3
NDUFS7
MED23
NME1-NME2
NME1
COX16
DCP1A
RPS29
PEX3
ADAT2
YWHAQ
ZNF117
TTLL12
TMEM41A
INTS12
GSTCD
RAB37
TMEM242
EIF2D
CALCB
RPL27
SATB1
SULT1C3
JMJD1C
RABGAP1L
ZMPSTE24
PLEC
NDUFB3
FAM126B
TMEM70
ELOC
FRA10AC1
MRPL44
GPD1L
KMT2A
GDPGP1
CIB1
TTC32
DCAF10
HMGB1
NARF
CALD1
DSTYK
NPAS4
TBC1D19
MAPRE2
SELENOH
USPL1
TMEM14C
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
CFHR4
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
POLR2J3
CLK4
STX18
GTF2H2C
RPL37
DPY19L4
DRG2
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
PNPLA7
ATP1A1
COMMD2
SLC33A1
ZNF561
POLR3B
CYBC1
TOR1AIP2
TOR1AIP1
RBBP9
ZNF792
LMLN2
TFPT
PRPF31
RERE
RPS14
ZNF408
ARHGAP1
GSTA4
CAT
MRPS31
TATDN3
NSL1
SMARCD2
UTP3
CLDN16
PPIP5K2
LIPA
GIN1
CCDC59
ZNF134
ALG10B
PIK3R1
NSFL1C
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
GTF3C3
REEP3
EIF3F
MAD1L1
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
RPL11
GTF2H4
ANKRD54
LSG1
EPS8
INTS5
YJU2
EIF3L
CENPT
RTTN
BAIAP2
FBXO31
AP3S2
SMG8
STAT3
REXO4
ADAMTS13
CCDC200
BMS1
CDK5RAP1
MMACHC
CCDC163
WDR36
PPP6R1
HTR5A
KDM1A
GCNT3
ITGA4
TEFM
THOC5
CAMK1D
FGD3
INO80C
RNF187
DRAP1
C11orf68
EIF1AD
BANF1
SNAP47
TACO1
ZNF841
ORC4
MBD5
ZNF829
ZNF568
PPP1R11
GINS1
ZBTB45
SCAND1
COPS7B
SUPT6H
SDF2
MRPL21
IGHMBP2
SCARF1
SCMH1
JMJD4
C3orf14
PSMF1
KANSL3
FER1L5
SLC2A7
ILF2
SLC41A3
ATP5MC2
USP30
SGCE
PEG10
SNX17
EIF2B4
FAM207A
TTC26
TRUB2
COQ4
POLR3E
TMEM222
RILP
NEMF
WDR11
SAR1B
CCSER2
SLC29A2
DUS1L
FAM133B
FGFBP3
CCDC97
ATR
ZNF571
ZNF540
NBN
ZNF391
RMND1
ARMT1
TSEN15
AKAP10
MTIF2
GALK2
MOB4
MRPL1
BNIP1
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZBTB40
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
NFE2L3
CANT1
HSPE1-MOB4
HSPE1
HSPD1
MRPS23
SAMD4A
NCOA7
GASK1A
TEX46
TTI2
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
C16orf54
ANXA2
COLEC11
TMX2
MED19
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
RUVBL1
KIAA1549
NRBP2
ZNF566
FASTKD1
GTF3C5
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
SEC13
STAU1
CLTB
MNAT1
PIN4
NUP54
MAN2C1
MITD1
C8orf37
TTC4
SERHL2
TPR
ODR4
ZNF609
LSS
NR1H3
ACP2
FBXL12
SLC45A4
ZCCHC4
ANK3
CLDN4
INPP5F
TMEM101
RMDN2
CCNI
SERPINB1
OPA1
NDUFS3
KBTBD4
CD14
RPS20
ADPRS
ADNP
KLRD1
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
B4GALT7
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
TMBIM4
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
FAM228B
FABP6
BRWD1
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
METTL9
SRSF7
ALKBH3
SLC35A3
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
ADRM1
PHIP
CASC3
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
HUS1
RANBP1
EIF3E
ZNF292
TPK1
TIMM22
SESN1
PSMD3
POLR1H
NCBP3
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
N4BP2L2
RPL26L1
LRRC37A3
TEX50
FAM98B
CADM2
ZNF280D
SEC23B
AGK
PRRC1
GFI1B
MTOR
SMG7
FBXO38
TTC13
CCR6
SEC22B
SCGB1C1
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
RNF125
SACM1L
DLAT
ZNF605
NFAT5
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
ZNF554
FOXN1
CASP10
DHRS2
PIH1D2
NKAPD1
ANKRD40
RPL5
TARS3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
HAX1
KMT2D
AVL9
ZSCAN22
SRRM3
MYCBP2
SNRPD3
GUCD1
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
ZNF76
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
MRPL16
C10orf88
WWOX
CLUL1
ZNF383
MFF
ZNF512B
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
SLC35E2B
MAPK1IP1L
HLA-E
TBCK
AIMP1
PRPSAP1
STK19
DXO
CREM
MRPL39
NOXA1
ITGAL
RPS3A
CBWD5
EPB41
DHX16
ZZZ3
RCAN1
PCBP2
NOTCH2NLA
MRPS33
HIP1
GSPT1
ERCC6L2
GCNT1
WDFY1
SGMS2
TBL1X
PTPN4
SLC35B1
CNN2
NUP107
GLIPR1L2
LRRC59
ATG101
ZNF385A
RRN3
TMEM259
ZNF546
MRPL19
PPP1R3B
SDCCAG8
CEP170
FBXO22
TRDMT1
EEA1
LTA4H
ARRDC2
H4C11
NSUN4
NDFIP1
RPS19
TFPI
ASF1A
PFKM
DHTKD1
MEMO1
SOD2
RALBP1
TULP4
GNB2
ZNF518A
HNRNPA1L2
DNAJC11
SAE1
RABGGTA
STX6
KNL1
CDK12
CYB561D1
XKR7
RESF1
HEXIM1
METAP1
KIF2C
CELF2
ELAVL3
PES1
OR2AP1
ARMH3
MED4
ZNF846
PHF21A
IFI44
RTN4
TSC1
PAK1IP1
INTS2
C6orf52
CYB5A
ACBD6
SET
MMEL1
STC1
SEC14L5
ATG4C
CCDC115
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
SLC39A3
LMBR1L
UGCG
RRP15
DCT
TLR1
ATG5
ABCC10
FLT3LG
TM9SF4
EIF2B3